Os03g0370900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Cytochrome P450.
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Os03g0370900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Cytochrome P450.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 68.14 | 0.388 | 9.57 | 1.18 | 1.38 | 0.646 | 1.19 | 1.09 | 0.631 | 22.5 | 70 | 1288 | -- | -- |
| 70.49 | 0.391 | 9.55 | 1.36 | 1.39 | 0.707 | 1.08 | -- | 0.64 | 22.5 | 69.93 | 1265 | -- | -- |
| 73.77 | 0.4 | 9.56 | 1.16 | 1.36 | 0.61 | -- | 0.987 | 0.631 | 22.4 | 71 | 1326 | -- | -- |
| 75.22 | 0.404 | 9.55 | 1.31 | 1.39 | 0.689 | -- | -- | 0.635 | 22.5 | 70 | 1265 | -- | -- |
| 169.95 | 0.607 | 9.52 | 1.18 | -- | 0.786 | -- | 0.941 | 0.644 | -- | 74 | 1543 | -- | -- |
| 89.29 | 0.443 | 9.57 | 1.19 | 1.29 | -- | 0.951 | -- | 0.581 | 22.2 | -- | -- | -- | -- |
| 92.9 | 0.451 | 9.57 | 1.15 | 1.29 | -- | -- | -- | 0.579 | 22.2 | -- | -- | -- | -- |
| 168.86 | 0.608 | 9.53 | 1.22 | -- | 0.483 | -- | -- | 0.588 | -- | 75 | 2982 | -- | -- |
| 94.06 | 0.452 | 9.6 | -- | 1.29 | 1.21 | -- | -- | 0.419 | 22.2 | 65.03 | 47520 | -- | -- |
| 193.71 | 0.65 | 9.53 | 1.17 | -- | -- | -- | -- | 0.582 | -- | -- | -- | -- | -- |
| 127.9 | 0.529 | 9.6 | -- | 1.29 | -- | -- | -- | 0.451 | 22.3 | -- | -- | -- | -- |
| 194.5 | 0.65 | 9.58 | -- | -- | 1.14 | -- | -- | 0.386 | -- | 63.44 | 47520 | -- | -- |
| 229.87 | 0.708 | 9.56 | -- | -- | -- | -- | -- | 0.452 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 61.87 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 23 | 8 |
| 4 | 62.20 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 1 | 6 |
| 16 | 62.70 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 22 | 62.85 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 4 | 3 |
| 24 | 62.87 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 23 | 8 |
| 26 | 62.93 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 37 | 63.07 | wind | 3.0 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 41 | 63.20 | wind | 3.0 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 65 | 63.55 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 4 | 3 |
| 94 | 63.82 | wind | 3.0 | 43200 | < th | dose independent | rect. | 23 | 9 |
| 102 | 63.93 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 7 |
| 113 | 64.03 | wind | 3.0 | 43200 | > th | dose independent | rect. | 5 | 3 |
| 115 | 64.04 | wind | 3.0 | 43200 | < th | dose independent | rect. | 5 | 3 |
| 126 | 64.10 | wind | 3.0 | 43200 | > th | dose independent | rect. | 23 | 10 |
| 133 | 64.13 | wind | 3.0 | 43200 | < th | dose independent | rect. | 1 | 7 |
| 139 | 64.17 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 7 |
| 140 | 64.17 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 7 |
| 160 | 64.32 | wind | 3.0 | 43200 | > th | dose independent | rect. | 1 | 7 |
| 179 | 64.39 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 1 | 2 |
| 181 | 64.39 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 7 | 9 |
| 222 | 64.59 | wind | 5.0 | 43200 | < th | dose dependent | sin | 8 | NA |
| 286 | 64.83 | wind | 1.0 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 310 | 64.89 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 24 | 4 |
| 374 | 65.12 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 5 |
| 389 | 65.16 | wind | 1.0 | 43200 | > th | dose dependent | sin | 8 | NA |
| 412 | 65.23 | wind | 3.0 | 43200 | < th | dose independent | sin | 8 | NA |
| 442 | 65.33 | wind | 3.0 | 43200 | > th | dose independent | sin | 8 | NA |
| 493 | 65.51 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 5 |
| 495 | 65.51 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 5 |
| 498 | 65.53 | wind | 9.0 | 14400 | < th | dose independent | rect. | 7 | 4 |
| 551 | 65.74 | wind | 1.0 | 43200 | < th | dose independent | rect. | 1 | 1 |
| 570 | 65.82 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 3 |
| 656 | 66.16 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 677 | 66.22 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 13 | 2 |
| 804 | 66.70 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 10 | 1 |
| 818 | 66.74 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 6 | 5 |
| 907 | 67.17 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 915 | 67.23 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 926 | 67.33 | wind | 9.0 | 14400 | > th | dose independent | rect. | 7 | 4 |
| 942 | 67.41 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 10 | 8 |
| 968 | 67.53 | wind | 9.0 | 14400 | > th | dose independent | rect. | 9 | 2 |
| 996 | 67.65 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 14 | 2 |
| 998 | 67.65 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 14 | 2 |