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Os03g0367200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Flavonoid 3',5'-hydroxylase (EC 1.14.13.88) (F3'5'H) (Cytochrome P450 75A2) (CYPLXXVA2) (P-450EG1).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.69 (0.0523) R2 : 0.345
β1 : -0.39 (0.241) R2dD : 0.0101 R2D : -0.0324
β2 : 1.38 (0.105) R2dC : 0.251 R2C : 0.238
β3 : 1.33 (0.214) R2dE : 0.12 R2E : -0.0941
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : 5.44 (0.829) R2dD*E : 0.241 R2D*E : -0.062
γ1 : 0.0932 (0.11) R2dN8 : 0.00204 R2N8 : -0.0096
σ : 0.754
deviance : 262.37
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_____
C
peak time of C : 6.94
E
wheather : temperature
threshold : 28.8
memory length : 7822
response mode : < th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
261.12 0.759 9.69 -0.401 1.38 1.31 0.704 5.36 0.0899 6.96 29.16 7770 -- --
281.44 0.781 9.5 0.684 1.42 0.669 0.74 -- 0.329 6.91 34.57 12783 -- --
262.37 0.754 9.69 -0.39 1.38 1.33 -- 5.44 0.0932 6.94 28.8 7822 -- --
280.71 0.78 9.44 1.02 1.39 0.966 -- -- 0.551 6.99 59.3 17203 -- --
362.33 0.887 9.72 -0.344 -- 1.36 -- 5.4 0.123 -- 29.41 7824 -- --
293.38 0.803 9.53 0.269 1.39 -- 0.75 -- 0.157 7.1 -- -- -- --
294.86 0.804 9.53 0.283 1.39 -- -- -- 0.156 7.07 -- -- -- --
381.05 0.909 9.47 1.08 -- 1.02 -- -- 0.599 -- 73.76 16525 -- --
293.26 0.798 9.52 -- 1.38 0.401 -- -- 0.196 7.02 105.3 6321 -- --
396.44 0.93 9.56 0.311 -- -- -- -- 0.181 -- -- -- -- --
296.97 0.806 9.54 -- 1.39 -- -- -- 0.124 7.06 -- -- -- --
391.72 0.922 9.55 -- -- 0.585 -- -- 0.236 -- 121.9 2065 -- --
398.98 0.932 9.57 -- -- -- -- -- 0.146 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 252.98 wind 1 4320 > th dose dependent rect. 22 1
2 253.54 wind 9 4320 < th dose dependent rect. 22 1
4 254.28 humidity 80 14400 > th dose dependent rect. 3 3
16 257.28 humidity 90 14400 < th dose independent rect. 4 2
21 257.60 temperature 20 14400 > th dose independent rect. 24 1
25 258.31 temperature 20 14400 < th dose independent rect. 24 1
28 258.63 temperature 20 14400 > th dose independent rect. 23 10
32 258.72 temperature 20 14400 < th dose independent rect. 23 10
36 258.76 temperature 20 14400 > th dose independent rect. 4 4
72 259.09 temperature 20 14400 < th dose independent rect. 4 4
77 259.12 humidity 90 14400 < th dose independent rect. 2 5
78 259.12 temperature 20 14400 < th dose independent rect. 23 6
83 259.14 temperature 20 14400 < th dose independent sin 8 NA
96 259.18 temperature 20 14400 > th dose independent sin 8 NA
124 259.31 humidity 90 14400 > th dose independent rect. 20 10
130 259.35 humidity 90 14400 > th dose independent rect. 3 4
133 259.35 temperature 30 4320 < th dose dependent rect. 13 1
158 259.48 humidity 90 14400 > th dose independent rect. 1 7
168 259.51 humidity 90 14400 > th dose independent rect. 18 12
210 259.70 temperature 30 14400 < th dose dependent rect. 11 19
215 259.72 temperature 30 14400 < th dose dependent rect. 11 17
238 259.79 humidity 90 14400 > th dose independent rect. 5 1
248 259.80 temperature 30 14400 < th dose dependent rect. 24 18
258 259.83 wind 3 4320 > th dose independent rect. 21 4
262 259.84 humidity 90 14400 < th dose independent rect. 19 11
264 259.84 temperature 30 14400 < th dose dependent rect. 15 1
315 259.91 temperature 10 14400 > th dose dependent rect. 11 19
329 259.94 temperature 10 14400 > th dose dependent rect. 11 17
382 260.00 temperature 20 14400 < th dose independent rect. 23 22
393 260.01 temperature 10 14400 > th dose dependent rect. 24 18
422 260.04 temperature 20 14400 > th dose independent rect. 23 21
431 260.05 temperature 30 14400 < th dose dependent no NA NA
432 260.05 temperature 10 14400 > th dose dependent rect. 15 1
440 260.05 temperature 30 14400 < th dose dependent rect. 5 23
449 260.06 temperature 30 14400 < th dose dependent rect. 17 23
466 260.08 temperature 30 14400 < th dose dependent sin 17 NA
508 260.10 temperature 30 14400 < th dose dependent rect. 11 8
583 260.15 temperature 30 14400 < th dose dependent rect. 14 4
669 260.19 temperature 30 14400 < th dose dependent sin 3 NA
709 260.21 temperature 10 14400 > th dose dependent no NA NA
744 260.22 temperature 10 14400 > th dose dependent rect. 5 23
751 260.23 temperature 10 14400 > th dose dependent rect. 11 7
764 260.23 temperature 10 14400 > th dose dependent rect. 17 23
770 260.24 temperature 10 14400 > th dose dependent sin 16 NA
812 260.25 temperature 10 14400 > th dose dependent rect. 2 23
846 260.27 humidity 90 14400 < th dose independent rect. 19 8