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Os03g0367200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
Description : Similar to Flavonoid 3',5'-hydroxylase (EC 1.14.13.88) (F3'5'H) (Cytochrome P450 75A2) (CYPLXXVA2) (P-450EG1).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
261.12 | 0.759 | 9.69 | -0.401 | 1.38 | 1.31 | 0.704 | 5.36 | 0.0899 | 6.96 | 29.16 | 7770 | -- | -- |
281.44 | 0.781 | 9.5 | 0.684 | 1.42 | 0.669 | 0.74 | -- | 0.329 | 6.91 | 34.57 | 12783 | -- | -- |
262.37 | 0.754 | 9.69 | -0.39 | 1.38 | 1.33 | -- | 5.44 | 0.0932 | 6.94 | 28.8 | 7822 | -- | -- |
280.71 | 0.78 | 9.44 | 1.02 | 1.39 | 0.966 | -- | -- | 0.551 | 6.99 | 59.3 | 17203 | -- | -- |
362.33 | 0.887 | 9.72 | -0.344 | -- | 1.36 | -- | 5.4 | 0.123 | -- | 29.41 | 7824 | -- | -- |
293.38 | 0.803 | 9.53 | 0.269 | 1.39 | -- | 0.75 | -- | 0.157 | 7.1 | -- | -- | -- | -- |
294.86 | 0.804 | 9.53 | 0.283 | 1.39 | -- | -- | -- | 0.156 | 7.07 | -- | -- | -- | -- |
381.05 | 0.909 | 9.47 | 1.08 | -- | 1.02 | -- | -- | 0.599 | -- | 73.76 | 16525 | -- | -- |
293.26 | 0.798 | 9.52 | -- | 1.38 | 0.401 | -- | -- | 0.196 | 7.02 | 105.3 | 6321 | -- | -- |
396.44 | 0.93 | 9.56 | 0.311 | -- | -- | -- | -- | 0.181 | -- | -- | -- | -- | -- |
296.97 | 0.806 | 9.54 | -- | 1.39 | -- | -- | -- | 0.124 | 7.06 | -- | -- | -- | -- |
391.72 | 0.922 | 9.55 | -- | -- | 0.585 | -- | -- | 0.236 | -- | 121.9 | 2065 | -- | -- |
398.98 | 0.932 | 9.57 | -- | -- | -- | -- | -- | 0.146 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance![]() |
Histogram![]() ![]() |
Local optima within top1000 grid-points
rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
---|---|---|---|---|---|---|---|---|---|
1 | 252.98 | wind | 1 | 4320 | > th | dose dependent | rect. | 22 | 1 |
2 | 253.54 | wind | 9 | 4320 | < th | dose dependent | rect. | 22 | 1 |
4 | 254.28 | humidity | 80 | 14400 | > th | dose dependent | rect. | 3 | 3 |
16 | 257.28 | humidity | 90 | 14400 | < th | dose independent | rect. | 4 | 2 |
21 | 257.60 | temperature | 20 | 14400 | > th | dose independent | rect. | 24 | 1 |
25 | 258.31 | temperature | 20 | 14400 | < th | dose independent | rect. | 24 | 1 |
28 | 258.63 | temperature | 20 | 14400 | > th | dose independent | rect. | 23 | 10 |
32 | 258.72 | temperature | 20 | 14400 | < th | dose independent | rect. | 23 | 10 |
36 | 258.76 | temperature | 20 | 14400 | > th | dose independent | rect. | 4 | 4 |
72 | 259.09 | temperature | 20 | 14400 | < th | dose independent | rect. | 4 | 4 |
77 | 259.12 | humidity | 90 | 14400 | < th | dose independent | rect. | 2 | 5 |
78 | 259.12 | temperature | 20 | 14400 | < th | dose independent | rect. | 23 | 6 |
83 | 259.14 | temperature | 20 | 14400 | < th | dose independent | sin | 8 | NA |
96 | 259.18 | temperature | 20 | 14400 | > th | dose independent | sin | 8 | NA |
124 | 259.31 | humidity | 90 | 14400 | > th | dose independent | rect. | 20 | 10 |
130 | 259.35 | humidity | 90 | 14400 | > th | dose independent | rect. | 3 | 4 |
133 | 259.35 | temperature | 30 | 4320 | < th | dose dependent | rect. | 13 | 1 |
158 | 259.48 | humidity | 90 | 14400 | > th | dose independent | rect. | 1 | 7 |
168 | 259.51 | humidity | 90 | 14400 | > th | dose independent | rect. | 18 | 12 |
210 | 259.70 | temperature | 30 | 14400 | < th | dose dependent | rect. | 11 | 19 |
215 | 259.72 | temperature | 30 | 14400 | < th | dose dependent | rect. | 11 | 17 |
238 | 259.79 | humidity | 90 | 14400 | > th | dose independent | rect. | 5 | 1 |
248 | 259.80 | temperature | 30 | 14400 | < th | dose dependent | rect. | 24 | 18 |
258 | 259.83 | wind | 3 | 4320 | > th | dose independent | rect. | 21 | 4 |
262 | 259.84 | humidity | 90 | 14400 | < th | dose independent | rect. | 19 | 11 |
264 | 259.84 | temperature | 30 | 14400 | < th | dose dependent | rect. | 15 | 1 |
315 | 259.91 | temperature | 10 | 14400 | > th | dose dependent | rect. | 11 | 19 |
329 | 259.94 | temperature | 10 | 14400 | > th | dose dependent | rect. | 11 | 17 |
382 | 260.00 | temperature | 20 | 14400 | < th | dose independent | rect. | 23 | 22 |
393 | 260.01 | temperature | 10 | 14400 | > th | dose dependent | rect. | 24 | 18 |
422 | 260.04 | temperature | 20 | 14400 | > th | dose independent | rect. | 23 | 21 |
431 | 260.05 | temperature | 30 | 14400 | < th | dose dependent | no | NA | NA |
432 | 260.05 | temperature | 10 | 14400 | > th | dose dependent | rect. | 15 | 1 |
440 | 260.05 | temperature | 30 | 14400 | < th | dose dependent | rect. | 5 | 23 |
449 | 260.06 | temperature | 30 | 14400 | < th | dose dependent | rect. | 17 | 23 |
466 | 260.08 | temperature | 30 | 14400 | < th | dose dependent | sin | 17 | NA |
508 | 260.10 | temperature | 30 | 14400 | < th | dose dependent | rect. | 11 | 8 |
583 | 260.15 | temperature | 30 | 14400 | < th | dose dependent | rect. | 14 | 4 |
669 | 260.19 | temperature | 30 | 14400 | < th | dose dependent | sin | 3 | NA |
709 | 260.21 | temperature | 10 | 14400 | > th | dose dependent | no | NA | NA |
744 | 260.22 | temperature | 10 | 14400 | > th | dose dependent | rect. | 5 | 23 |
751 | 260.23 | temperature | 10 | 14400 | > th | dose dependent | rect. | 11 | 7 |
764 | 260.23 | temperature | 10 | 14400 | > th | dose dependent | rect. | 17 | 23 |
770 | 260.24 | temperature | 10 | 14400 | > th | dose dependent | sin | 16 | NA |
812 | 260.25 | temperature | 10 | 14400 | > th | dose dependent | rect. | 2 | 23 |
846 | 260.27 | humidity | 90 | 14400 | < th | dose independent | rect. | 19 | 8 |