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Os03g0366700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.85 (0.0156) R2 : 0.6
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.744 (0.0403) R2dC : 0.302 R2C : 0.198
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.616 (0.0328) R2dN8 : 0.402 R2N8 : 0.298
σ : 0.294
deviance : 39.38
__
_____
C
peak time of C : 19.3
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
33.63 0.272 8.85 -0.269 0.461 1.33 0.0435 -1.01 0.54 3.2 0.4501 737 -- --
33.83 0.271 8.84 -0.293 0.521 1.67 0.762 -- 0.522 5.04 0.2962 826 -- --
33.57 0.27 8.85 -0.295 0.445 1.36 -- -1.09 0.544 3.43 0.4529 756 -- --
34.94 0.275 8.84 -0.265 0.455 1.61 -- -- 0.545 4.89 0.2885 818 -- --
35.43 0.277 8.85 -0.239 -- 1.27 -- -0.854 0.506 -- 0.3568 921 -- --
38.51 0.291 8.85 -0.127 0.745 -- -0.439 -- 0.604 19.3 -- -- -- --
39.02 0.293 8.86 -0.118 0.743 -- -- -- 0.603 19.4 -- -- -- --
35.94 0.279 8.84 -0.247 -- 1.14 -- -- 0.539 -- 0.2304 915 -- --
36.71 0.282 8.84 -- 0.432 1.54 -- -- 0.568 4.43 0.29 808 -- --
68.4 0.386 8.84 -0.13 -- -- -- -- 0.591 -- -- -- -- --
39.38 0.294 8.85 -- 0.744 -- -- -- 0.616 19.3 -- -- -- --
37.32 0.285 8.84 -- -- 1.11 -- -- 0.572 -- 0.3502 910 -- --
68.85 0.387 8.83 -- -- -- -- -- 0.605 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 32.85 precipitation 0.1 14400 > th dose independent rect. 4 4
2 32.88 precipitation 0.1 14400 > th dose dependent rect. 4 4
5 32.92 precipitation 0.1 14400 < th dose independent rect. 4 4
6 32.92 precipitation 0.1 14400 < th dose dependent rect. 4 4
9 32.96 precipitation 0.1 14400 > th dose independent rect. 5 2
10 32.96 precipitation 0.1 14400 > th dose dependent rect. 5 2
11 33.01 precipitation 0.1 14400 < th dose independent rect. 5 2
12 33.01 precipitation 0.1 14400 < th dose dependent rect. 5 2
15 33.10 radiation 1.0 720 < th dose dependent rect. 15 8
19 33.13 radiation 1.0 720 < th dose dependent sin 14 NA
27 33.22 radiation 1.0 720 < th dose dependent rect. 6 17
30 33.25 radiation 1.0 720 > th dose independent rect. 7 12
41 33.26 radiation 1.0 720 < th dose independent rect. 15 8
56 33.38 radiation 1.0 720 < th dose independent rect. 8 15
60 33.41 radiation 1.0 720 > th dose independent sin 15 NA
78 33.52 radiation 1.0 720 < th dose independent sin 15 NA
101 33.60 radiation 1.0 720 < th dose dependent rect. 6 23
105 33.63 radiation 1.0 720 > th dose independent rect. 15 4
133 33.67 radiation 1.0 720 < th dose dependent rect. 14 17
148 33.68 radiation 1.0 720 < th dose dependent rect. 3 23
152 33.70 temperature 20.0 720 > th dose dependent rect. 16 2
154 33.70 radiation 1.0 720 < th dose dependent rect. 14 15
161 33.72 temperature 25.0 720 > th dose independent rect. 15 4
194 33.75 temperature 20.0 720 > th dose dependent rect. 15 4
205 33.77 radiation 1.0 720 < th dose dependent rect. 13 22
231 33.82 radiation 1.0 720 < th dose dependent rect. 1 22
233 33.83 temperature 25.0 720 > th dose independent rect. 16 2
244 33.85 temperature 10.0 720 > th dose dependent rect. 13 6
248 33.86 radiation 1.0 720 < th dose dependent no NA NA
293 33.94 wind 1.0 43200 > th dose independent rect. 7 1
298 33.94 radiation 1.0 720 < th dose dependent rect. 19 23
299 33.95 radiation 1.0 720 < th dose independent rect. 4 17
301 33.96 radiation 1.0 720 > th dose independent sin 22 NA
319 33.98 temperature 25.0 720 < th dose independent rect. 10 11
321 33.98 radiation 1.0 720 < th dose independent rect. 8 21
338 34.01 radiation 1.0 720 < th dose independent rect. 4 19
375 34.09 radiation 1.0 720 < th dose independent rect. 14 15
396 34.14 wind 1.0 43200 < th dose independent rect. 7 1
419 34.18 radiation 1.0 720 > th dose independent rect. 13 22
420 34.18 temperature 10.0 720 > th dose dependent rect. 7 12
426 34.20 temperature 25.0 720 < th dose independent rect. 15 4
429 34.21 temperature 25.0 720 < th dose independent rect. 14 6
436 34.22 temperature 25.0 720 < th dose independent sin 20 NA
441 34.22 radiation 1.0 720 < th dose independent rect. 3 23
442 34.22 temperature 25.0 30 < th dose dependent sin 18 NA
446 34.23 radiation 1.0 720 < th dose independent rect. 1 22
461 34.25 wind 5.0 4320 < th dose independent rect. 14 1
477 34.26 radiation 1.0 720 > th dose independent rect. 15 23
500 34.29 temperature 30.0 720 < th dose dependent rect. 10 11
527 34.33 radiation 1.0 720 > th dose independent no NA NA
615 34.36 humidity 70.0 720 > th dose independent rect. 19 10
617 34.36 radiation 1.0 720 < th dose independent rect. 13 22
624 34.36 wind 9.0 14400 > th dose dependent rect. 22 17
629 34.37 radiation 1.0 720 > th dose independent rect. 15 20
639 34.38 wind 5.0 4320 > th dose independent rect. 14 1
652 34.39 radiation 1.0 720 < th dose independent no NA NA
655 34.39 wind 5.0 14400 > th dose dependent rect. 14 2
656 34.39 wind 5.0 14400 > th dose dependent rect. 11 5
658 34.39 wind 7.0 14400 > th dose dependent rect. 5 11
690 34.43 radiation 1.0 720 > th dose independent rect. 15 18
695 34.43 wind 7.0 14400 > th dose dependent rect. 9 7
696 34.43 wind 7.0 14400 > th dose dependent rect. 7 9
708 34.45 radiation 20.0 14400 < th dose independent rect. 19 11
709 34.45 temperature 30.0 720 < th dose independent rect. 17 14
715 34.45 radiation 1.0 720 < th dose independent rect. 19 23
742 34.47 wind 1.0 43200 < th dose dependent rect. 6 2
756 34.48 wind 9.0 14400 > th dose independent rect. 22 17
768 34.49 wind 9.0 14400 > th dose independent rect. 18 22
778 34.50 temperature 25.0 1440 > th dose independent rect. 11 1
781 34.50 humidity 70.0 14400 < th dose dependent rect. 20 1
782 34.50 atmosphere 1010.0 4320 > th dose dependent rect. 7 2
791 34.50 radiation 20.0 14400 > th dose dependent rect. 17 14
794 34.51 radiation 20.0 14400 < th dose independent rect. 1 5
795 34.51 wind 9.0 14400 > th dose independent rect. 13 7
798 34.51 wind 9.0 14400 < th dose independent rect. 22 17
838 34.53 temperature 25.0 1440 < th dose independent rect. 11 1
841 34.53 wind 9.0 14400 < th dose independent rect. 24 15
856 34.54 wind 7.0 14400 < th dose independent rect. 11 5
857 34.54 wind 9.0 14400 < th dose independent rect. 13 7
860 34.54 wind 5.0 43200 > th dose dependent rect. 16 1
868 34.54 wind 9.0 14400 > th dose dependent rect. 18 22
870 34.55 radiation 10.0 14400 > th dose independent rect. 5 1
871 34.55 humidity 70.0 14400 < th dose independent rect. 20 2
877 34.55 wind 7.0 14400 > th dose independent rect. 11 5
912 34.55 wind 7.0 14400 > th dose dependent rect. 11 9
948 34.57 temperature 30.0 720 < th dose dependent rect. 14 6
955 34.58 wind 9.0 14400 < th dose independent rect. 3 12
959 34.58 wind 7.0 14400 > th dose dependent sin 1 NA
972 34.59 humidity 70.0 14400 > th dose independent rect. 20 4
977 34.59 humidity 70.0 720 > th dose independent rect. 18 13