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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os03g0365900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Lipolytic enzyme, G-D-S-L family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.9 (0.0432) R2 : 2.26e-05
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.00924 (0.0911) R2dN8 : 2.92e-05 R2N8 : 2.26e-05
σ : 0.814
deviance : 304.48
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = atmosphere, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
275.3 0.78 2.96 0.544 0.261 14.1 1.07 26.9 0.081 7.11 1015 1440 -- --
285.79 0.787 2.91 0.473 0.299 0.759 1.18 -- -0.0786 6.79 1004 1565 -- --
277.29 0.776 2.98 0.581 0.276 14.5 -- 27.7 0.0779 6.2 1015 1465 -- --
287.18 0.789 2.91 0.454 0.295 0.802 -- -- -0.0803 6.12 1006 1614 -- --
280.97 0.781 2.98 0.616 -- 15 -- 28.7 0.0851 -- 1015 1471 -- --
293.99 0.804 2.88 0.343 0.273 -- 1.06 -- 0.0476 6.94 -- -- -- --
296.78 0.807 2.88 0.361 0.282 -- -- -- 0.044 6.33 -- -- -- --
292.22 0.796 2.91 0.473 -- 0.78 -- -- -0.056 -- 1006 1615 -- --
292.71 0.797 2.92 -- 0.321 0.723 -- -- -0.11 5.84 1006 1518 -- --
300.91 0.811 2.89 0.368 -- -- -- -- 0.0501 -- -- -- -- --
300.21 0.811 2.89 -- 0.287 -- -- -- 0.00385 6.26 -- -- -- --
297.34 0.806 2.92 -- -- 0.736 -- -- -0.0922 -- 1006 1518 -- --
304.48 0.814 2.9 -- -- -- -- -- 0.00924 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 271.50 temperature 25.0 30 > th dose dependent rect. 6 1
2 271.78 wind 5.0 90 > th dose dependent rect. 22 1
4 272.01 atmosphere 1010.0 30 < th dose independent rect. 6 1
5 272.23 radiation 10.0 30 < th dose independent rect. 6 1
9 273.76 wind 9.0 1440 > th dose independent rect. 22 4
17 273.76 wind 9.0 1440 > th dose dependent rect. 22 4
25 273.77 wind 9.0 1440 > th dose independent rect. 22 1
29 273.77 wind 9.0 1440 > th dose dependent rect. 22 1
33 273.86 wind 5.0 90 > th dose independent rect. 22 1
106 274.10 wind 1.0 10 > th dose dependent rect. 6 1
107 274.21 atmosphere 1015.0 1440 > th dose dependent rect. 22 14
111 274.39 atmosphere 1015.0 1440 > th dose dependent rect. 23 12
114 274.90 atmosphere 1015.0 30 < th dose independent rect. 7 23
115 274.92 atmosphere 1015.0 1440 > th dose dependent rect. 22 22
117 275.01 temperature 20.0 270 < th dose dependent rect. 5 15
120 275.06 atmosphere 1015.0 1440 > th dose independent rect. 23 13
121 275.06 atmosphere 1015.0 1440 < th dose independent rect. 23 13
123 275.11 temperature 10.0 30 > th dose dependent rect. 7 23
125 275.15 humidity 90.0 30 < th dose independent rect. 5 2
126 275.18 atmosphere 1015.0 1440 > th dose dependent sin 7 NA
127 275.18 atmosphere 1015.0 1440 > th dose dependent rect. 13 23
131 275.21 humidity 90.0 30 < th dose dependent rect. 6 1
141 275.40 atmosphere 1010.0 30 < th dose dependent rect. 6 1
155 275.58 atmosphere 1015.0 1440 > th dose dependent rect. 10 14
190 275.70 atmosphere 1015.0 1440 > th dose dependent no NA NA
270 276.46 atmosphere 1015.0 1440 > th dose dependent sin 20 NA
273 276.53 temperature 20.0 270 < th dose dependent rect. 5 7
280 276.71 radiation 1.0 10 > th dose dependent rect. 6 1
303 277.28 temperature 15.0 4320 > th dose independent rect. 7 1
305 277.34 atmosphere 1005.0 1440 > th dose dependent rect. 13 1
307 277.45 atmosphere 1005.0 1440 > th dose dependent rect. 12 4
319 277.68 atmosphere 1015.0 1440 > th dose independent rect. 22 22
323 277.75 radiation 20.0 30 < th dose dependent rect. 6 1
335 277.80 temperature 20.0 270 < th dose dependent sin 0 NA
343 277.91 temperature 25.0 30 > th dose independent rect. 6 1
369 278.16 atmosphere 1005.0 1440 > th dose dependent rect. 15 1
379 278.37 atmosphere 1015.0 1440 > th dose independent sin 6 NA
381 278.38 atmosphere 1010.0 720 > th dose independent rect. 23 2
387 278.56 atmosphere 1005.0 720 > th dose dependent rect. 22 5
396 278.64 wind 1.0 10 > th dose independent rect. 6 1
406 278.79 humidity 50.0 10 < th dose independent rect. 11 1
498 278.79 humidity 50.0 10 < th dose dependent rect. 11 1
590 278.81 atmosphere 1010.0 720 > th dose independent rect. 22 4
593 278.83 atmosphere 1010.0 720 > th dose dependent rect. 23 2
601 278.90 temperature 20.0 270 < th dose dependent rect. 23 20
602 278.92 atmosphere 1005.0 270 > th dose dependent rect. 6 1
606 278.98 atmosphere 1010.0 10 > th dose dependent rect. 24 10
628 279.19 atmosphere 1015.0 1440 < th dose independent rect. 22 21
632 279.23 atmosphere 995.0 4320 > th dose independent rect. 7 1
640 279.31 wind 9.0 270 > th dose dependent rect. 19 16
652 279.40 atmosphere 1010.0 270 > th dose dependent rect. 23 9
666 279.47 atmosphere 1015.0 1440 < th dose independent sin 6 NA
686 279.60 atmosphere 1005.0 30 > th dose independent rect. 6 1
688 279.61 wind 1.0 30 < th dose independent rect. 6 1
691 279.62 atmosphere 1005.0 720 > th dose dependent rect. 19 11
696 279.65 wind 9.0 1440 < th dose independent rect. 7 1
701 279.65 temperature 30.0 1440 < th dose independent rect. 7 1
705 279.65 humidity 50.0 1440 > th dose independent rect. 7 1
711 279.65 atmosphere 1015.0 1440 < th dose independent rect. 7 1
712 279.65 temperature 10.0 1440 > th dose independent rect. 8 23
716 279.69 humidity 80.0 30 > th dose independent rect. 6 1
717 279.69 atmosphere 1005.0 720 > th dose dependent rect. 20 9
728 279.73 temperature 20.0 270 < th dose dependent rect. 23 13
753 279.77 radiation 1.0 30 > th dose independent rect. 6 1
754 279.77 temperature 15.0 30 > th dose independent rect. 7 23
767 279.78 temperature 10.0 30 > th dose independent rect. 6 1
769 279.78 temperature 30.0 30 < th dose independent rect. 6 1
770 279.78 humidity 50.0 30 > th dose independent rect. 6 1
778 279.78 precipitation 0.1 30 < th dose independent rect. 6 1
780 279.78 wind 9.0 10 < th dose independent rect. 7 23
782 279.78 precipitation 0.1 30 < th dose dependent rect. 6 1
783 279.78 humidity 90.0 10 < th dose dependent rect. 4 3
797 279.82 atmosphere 1015.0 1440 > th dose dependent rect. 3 10
809 279.85 atmosphere 1015.0 1440 > th dose dependent rect. 10 3
860 280.03 wind 3.0 90 > th dose dependent rect. 4 1
872 280.09 atmosphere 1010.0 270 > th dose independent rect. 23 9
900 280.26 atmosphere 1005.0 720 > th dose dependent rect. 16 15
904 280.29 atmosphere 1015.0 1440 > th dose independent rect. 10 15
910 280.29 atmosphere 1015.0 1440 > th dose independent rect. 3 21
935 280.33 radiation 40.0 1440 < th dose independent rect. 7 1
936 280.33 atmosphere 1015.0 1440 > th dose independent rect. 14 23
952 280.34 atmosphere 1015.0 1440 < th dose independent rect. 1 10
978 280.39 atmosphere 1015.0 1440 > th dose independent no NA NA