Os03g0364500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os03g0364500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 50.77 | 0.335 | 9.41 | 1.02 | 0.486 | 0.948 | 0.113 | -1.28 | 0.0696 | 20.8 | 23.1 | 803 | -- | -- |
| 52.34 | 0.337 | 9.43 | 0.864 | 0.479 | 1.23 | 0.357 | -- | 0.0334 | 21 | 22.43 | 855 | -- | -- |
| 50.8 | 0.332 | 9.41 | 1.02 | 0.484 | 0.947 | -- | -1.33 | 0.0674 | 20.8 | 23 | 817 | -- | -- |
| 52.82 | 0.339 | 9.43 | 0.864 | 0.497 | 1.23 | -- | -- | 0.0338 | 20.9 | 22.5 | 834 | -- | -- |
| 62.09 | 0.367 | 9.41 | 0.992 | -- | 0.894 | -- | -1.28 | 0.0395 | -- | 22.5 | 1224 | -- | -- |
| 69.53 | 0.391 | 9.47 | 0.554 | 0.391 | -- | 0.424 | -- | -0.145 | 20.6 | -- | -- | -- | -- |
| 70.06 | 0.392 | 9.47 | 0.541 | 0.394 | -- | -- | -- | -0.145 | 20.3 | -- | -- | -- | -- |
| 63.69 | 0.372 | 9.42 | 0.887 | -- | 1.35 | -- | -- | 0.0134 | -- | 21.37 | 1273 | -- | -- |
| 69.51 | 0.388 | 9.47 | -- | 0.465 | 0.773 | -- | -- | -0.109 | 20.7 | 22.85 | 681 | -- | -- |
| 78.65 | 0.414 | 9.46 | 0.539 | -- | -- | -- | -- | -0.149 | -- | -- | -- | -- | -- |
| 77.79 | 0.413 | 9.49 | -- | 0.391 | -- | -- | -- | -0.205 | 20.4 | -- | -- | -- | -- |
| 80.59 | 0.419 | 9.46 | -- | -- | 0.633 | -- | -- | -0.144 | -- | 22.85 | 681 | -- | -- |
| 86.31 | 0.434 | 9.48 | -- | -- | -- | -- | -- | -0.209 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 48.22 | radiation | 1 | 4320 | < th | dose dependent | rect. | 3 | 2 |
| 2 | 48.26 | radiation | 1 | 4320 | < th | dose dependent | rect. | 24 | 5 |
| 7 | 48.61 | radiation | 1 | 4320 | < th | dose dependent | rect. | 19 | 10 |
| 11 | 48.98 | wind | 1 | 43200 | < th | dose independent | rect. | 2 | 1 |
| 12 | 49.69 | wind | 1 | 43200 | < th | dose dependent | rect. | 2 | 1 |
| 13 | 49.77 | wind | 1 | 43200 | > th | dose independent | rect. | 2 | 1 |
| 14 | 49.93 | radiation | 1 | 4320 | > th | dose independent | rect. | 18 | 1 |
| 25 | 50.16 | humidity | 90 | 14400 | > th | dose independent | rect. | 21 | 10 |
| 26 | 50.20 | humidity | 90 | 14400 | < th | dose independent | rect. | 22 | 9 |
| 31 | 50.30 | humidity | 90 | 14400 | > th | dose independent | rect. | 24 | 1 |
| 32 | 50.30 | humidity | 90 | 14400 | > th | dose independent | rect. | 23 | 9 |
| 39 | 50.38 | wind | 9 | 4320 | > th | dose dependent | rect. | 11 | 1 |
| 40 | 50.40 | humidity | 90 | 14400 | > th | dose independent | rect. | 23 | 3 |
| 43 | 50.46 | humidity | 90 | 14400 | > th | dose independent | rect. | 20 | 8 |
| 44 | 50.47 | humidity | 90 | 14400 | > th | dose independent | rect. | 21 | 6 |
| 52 | 50.56 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 11 |
| 64 | 50.67 | wind | 9 | 4320 | > th | dose dependent | rect. | 15 | 14 |
| 76 | 50.74 | humidity | 80 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 77 | 50.74 | humidity | 80 | 14400 | > th | dose dependent | rect. | 24 | 7 |
| 83 | 50.81 | humidity | 90 | 14400 | < th | dose independent | rect. | 22 | 4 |
| 90 | 50.87 | humidity | 90 | 14400 | < th | dose independent | rect. | 23 | 1 |
| 98 | 50.91 | wind | 9 | 4320 | > th | dose dependent | rect. | 15 | 6 |
| 100 | 50.93 | humidity | 90 | 14400 | > th | dose independent | sin | 10 | NA |
| 106 | 50.95 | wind | 9 | 4320 | > th | dose dependent | rect. | 15 | 9 |
| 118 | 51.04 | temperature | 20 | 720 | < th | dose independent | rect. | 23 | 21 |
| 123 | 51.09 | temperature | 20 | 720 | < th | dose independent | rect. | 1 | 20 |
| 125 | 51.10 | temperature | 20 | 720 | > th | dose independent | rect. | 19 | 22 |
| 130 | 51.13 | temperature | 20 | 1440 | > th | dose independent | rect. | 21 | 2 |
| 133 | 51.13 | wind | 9 | 4320 | > th | dose dependent | rect. | 17 | 12 |
| 136 | 51.14 | wind | 9 | 4320 | > th | dose dependent | rect. | 17 | 5 |
| 144 | 51.17 | temperature | 20 | 720 | > th | dose independent | rect. | 4 | 22 |
| 148 | 51.20 | temperature | 15 | 14400 | > th | dose independent | rect. | 4 | 1 |
| 155 | 51.23 | humidity | 90 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 156 | 51.23 | humidity | 90 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 168 | 51.27 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 3 |
| 187 | 51.31 | wind | 9 | 4320 | < th | dose independent | rect. | 17 | 5 |
| 196 | 51.33 | humidity | 90 | 14400 | < th | dose independent | sin | 10 | NA |
| 209 | 51.39 | temperature | 20 | 720 | > th | dose independent | rect. | 12 | 23 |
| 211 | 51.40 | temperature | 15 | 14400 | < th | dose independent | rect. | 4 | 1 |
| 234 | 51.46 | wind | 9 | 4320 | > th | dose dependent | sin | 13 | NA |
| 236 | 51.47 | humidity | 90 | 14400 | > th | dose dependent | rect. | 4 | 3 |
| 267 | 51.56 | temperature | 20 | 1440 | < th | dose independent | rect. | 21 | 2 |
| 285 | 51.62 | temperature | 20 | 720 | > th | dose independent | rect. | 1 | 23 |
| 287 | 51.63 | wind | 9 | 4320 | > th | dose independent | rect. | 17 | 12 |
| 316 | 51.72 | wind | 9 | 4320 | < th | dose independent | rect. | 17 | 12 |
| 319 | 51.72 | humidity | 90 | 14400 | > th | dose dependent | rect. | 24 | 14 |
| 330 | 51.77 | temperature | 20 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 333 | 51.78 | wind | 9 | 4320 | > th | dose dependent | rect. | 15 | 3 |
| 337 | 51.79 | wind | 9 | 4320 | > th | dose independent | rect. | 17 | 6 |
| 342 | 51.80 | temperature | 20 | 720 | > th | dose independent | no | NA | NA |
| 353 | 51.81 | wind | 9 | 4320 | > th | dose dependent | rect. | 17 | 1 |
| 367 | 51.84 | wind | 9 | 4320 | < th | dose independent | rect. | 11 | 1 |
| 368 | 51.84 | temperature | 20 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 369 | 51.84 | radiation | 20 | 43200 | < th | dose independent | rect. | 3 | 3 |
| 372 | 51.84 | humidity | 90 | 14400 | > th | dose dependent | rect. | 24 | 11 |
| 375 | 51.85 | temperature | 20 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 383 | 51.86 | temperature | 20 | 720 | < th | dose independent | no | NA | NA |
| 398 | 51.90 | humidity | 80 | 14400 | > th | dose dependent | rect. | 22 | 5 |
| 399 | 51.91 | temperature | 20 | 14400 | < th | dose independent | rect. | 13 | 3 |
| 402 | 51.91 | humidity | 80 | 14400 | > th | dose dependent | rect. | 23 | 3 |
| 405 | 51.92 | temperature | 20 | 14400 | < th | dose dependent | rect. | 12 | 1 |
| 415 | 51.94 | temperature | 20 | 14400 | < th | dose dependent | rect. | 15 | 1 |
| 418 | 51.94 | temperature | 25 | 720 | < th | dose dependent | rect. | 23 | 21 |
| 436 | 51.97 | temperature | 20 | 720 | < th | dose independent | rect. | 4 | 23 |
| 437 | 51.97 | temperature | 20 | 720 | < th | dose independent | rect. | 13 | 23 |
| 445 | 51.98 | temperature | 20 | 720 | < th | dose independent | rect. | 15 | 23 |
| 454 | 51.99 | temperature | 20 | 14400 | < th | dose dependent | rect. | 12 | 5 |
| 458 | 52.00 | wind | 9 | 4320 | < th | dose independent | rect. | 16 | 17 |
| 460 | 52.00 | humidity | 90 | 14400 | > th | dose dependent | sin | 7 | NA |
| 462 | 52.00 | temperature | 20 | 1440 | < th | dose dependent | rect. | 21 | 9 |
| 470 | 52.02 | temperature | 20 | 14400 | < th | dose dependent | rect. | 14 | 3 |
| 484 | 52.04 | wind | 9 | 4320 | > th | dose independent | rect. | 15 | 16 |
| 512 | 52.07 | temperature | 20 | 720 | < th | dose independent | rect. | 10 | 23 |
| 540 | 52.10 | temperature | 20 | 1440 | < th | dose dependent | rect. | 4 | 1 |
| 682 | 52.29 | temperature | 20 | 720 | < th | dose independent | rect. | 8 | 23 |
| 695 | 52.31 | temperature | 20 | 14400 | < th | dose dependent | rect. | 9 | 9 |
| 733 | 52.37 | temperature | 20 | 720 | < th | dose independent | sin | 2 | NA |
| 770 | 52.42 | wind | 9 | 4320 | > th | dose independent | sin | 13 | NA |
| 774 | 52.42 | temperature | 20 | 14400 | < th | dose dependent | rect. | 9 | 1 |
| 848 | 52.51 | radiation | 10 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 889 | 52.55 | wind | 9 | 4320 | < th | dose independent | sin | 13 | NA |
| 932 | 52.61 | temperature | 25 | 720 | < th | dose dependent | rect. | 13 | 23 |
| 938 | 52.62 | temperature | 20 | 1440 | < th | dose dependent | sin | 11 | NA |
| 943 | 52.63 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 957 | 52.65 | humidity | 50 | 14400 | > th | dose dependent | rect. | 1 | 1 |
| 963 | 52.66 | temperature | 20 | 720 | > th | dose independent | rect. | 1 | 16 |