Os03g0364400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Phytosulfokine receptor-like protein.
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Os03g0364400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Phytosulfokine receptor-like protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 198.45 | 0.662 | 11.7 | 5.13 | 1.11 | -2.22 | -0.762 | 2.53 | 1.62 | 19.4 | 20.67 | 1320 | -- | -- |
| 209.7 | 0.674 | 11.8 | 4.94 | 1.1 | -2.28 | -0.671 | -- | 1.53 | 19 | 17.79 | 5688 | -- | -- |
| 199.96 | 0.659 | 11.8 | 5.13 | 1.11 | -2.24 | -- | 2.46 | 1.62 | 19.6 | 20.43 | 1306 | -- | -- |
| 207.31 | 0.671 | 11.8 | 4.58 | 1.12 | -1.99 | -- | -- | 1.42 | 19.1 | 22.2 | 5690 | -- | -- |
| 264.77 | 0.758 | 11.7 | 5.12 | -- | -2.21 | -- | 2.38 | 1.6 | -- | 20.62 | 1378 | -- | -- |
| 336.33 | 0.86 | 11.9 | 3.66 | 1.17 | -- | -0.801 | -- | 0.936 | 18.7 | -- | -- | -- | -- |
| 337.94 | 0.861 | 11.9 | 3.67 | 1.17 | -- | -- | -- | 0.933 | 18.7 | -- | -- | -- | -- |
| 272.24 | 0.768 | 11.8 | 4.5 | -- | -1.98 | -- | -- | 1.31 | -- | 22.8 | 5711 | -- | -- |
| 652.92 | 1.19 | 12 | -- | 0.972 | -0.919 | -- | -- | 0.595 | 18.1 | 29.23 | 7192 | -- | -- |
| 409.17 | 0.945 | 11.9 | 3.64 | -- | -- | -- | -- | 0.91 | -- | -- | -- | -- | -- |
| 692.89 | 1.23 | 12 | -- | 1.12 | -- | -- | -- | 0.525 | 18.9 | -- | -- | -- | -- |
| 695.78 | 1.23 | 12 | -- | -- | -0.935 | -- | -- | 0.51 | -- | 33.55 | 7034 | -- | -- |
| 759.16 | 1.29 | 12 | -- | -- | -- | -- | -- | 0.506 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 187.60 | wind | 9 | 43200 | > th | dose dependent | rect. | 19 | 11 |
| 6 | 189.57 | wind | 9 | 43200 | > th | dose dependent | rect. | 19 | 5 |
| 7 | 189.62 | wind | 9 | 43200 | > th | dose dependent | rect. | 19 | 7 |
| 11 | 190.26 | wind | 9 | 43200 | > th | dose independent | rect. | 19 | 5 |
| 15 | 190.72 | wind | 9 | 43200 | > th | dose independent | rect. | 19 | 8 |
| 20 | 191.22 | wind | 9 | 43200 | > th | dose independent | rect. | 19 | 10 |
| 25 | 192.13 | wind | 9 | 43200 | < th | dose independent | rect. | 19 | 5 |
| 28 | 193.23 | wind | 9 | 43200 | > th | dose dependent | rect. | 17 | 14 |
| 29 | 193.49 | wind | 9 | 43200 | < th | dose independent | rect. | 19 | 8 |
| 33 | 194.54 | temperature | 20 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 34 | 194.61 | wind | 9 | 43200 | < th | dose independent | rect. | 19 | 11 |
| 38 | 194.75 | temperature | 20 | 1440 | > th | dose dependent | rect. | 16 | 3 |
| 40 | 194.90 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 6 |
| 54 | 195.88 | temperature | 20 | 1440 | > th | dose dependent | rect. | 11 | 11 |
| 63 | 196.21 | temperature | 20 | 1440 | > th | dose dependent | rect. | 6 | 16 |
| 66 | 196.31 | wind | 9 | 43200 | > th | dose independent | rect. | 19 | 3 |
| 69 | 196.35 | temperature | 20 | 1440 | > th | dose dependent | sin | 20 | NA |
| 106 | 196.93 | temperature | 10 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 143 | 197.51 | wind | 9 | 43200 | > th | dose dependent | rect. | 17 | 8 |
| 144 | 197.51 | wind | 9 | 43200 | > th | dose dependent | rect. | 17 | 10 |
| 153 | 197.66 | wind | 9 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 194 | 198.27 | temperature | 20 | 720 | > th | dose dependent | rect. | 17 | 20 |
| 200 | 198.37 | temperature | 15 | 720 | > th | dose dependent | rect. | 17 | 22 |
| 220 | 198.62 | temperature | 10 | 720 | > th | dose dependent | rect. | 10 | 23 |
| 225 | 198.75 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 239 | 198.89 | temperature | 15 | 270 | > th | dose dependent | rect. | 24 | 22 |
| 245 | 198.97 | temperature | 20 | 1440 | > th | dose dependent | rect. | 11 | 22 |
| 248 | 199.01 | temperature | 20 | 720 | > th | dose dependent | rect. | 17 | 18 |
| 299 | 199.44 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 23 |
| 310 | 199.54 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 532 | 200.81 | temperature | 10 | 720 | > th | dose dependent | rect. | 16 | 17 |
| 600 | 201.27 | temperature | 10 | 720 | > th | dose dependent | rect. | 6 | 23 |
| 880 | 203.10 | wind | 5 | 43200 | > th | dose dependent | rect. | 18 | 21 |
| 972 | 203.58 | humidity | 60 | 14400 | < th | dose dependent | rect. | 17 | 1 |