Os03g0363900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Zinc finger, DHHC-type domain containing protein.
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Os03g0363900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Zinc finger, DHHC-type domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 12.42 | 0.166 | 10.1 | -0.171 | 0.262 | 0.376 | -0.0456 | -0.673 | 0.231 | 22.5 | 19.5 | 2037 | -- | -- |
| 13.1 | 0.169 | 10.1 | -0.12 | 0.273 | 0.543 | -0.0785 | -- | 0.239 | 22.2 | 19.1 | 2815 | -- | -- |
| 12.43 | 0.164 | 10.1 | -0.17 | 0.263 | 0.375 | -- | -0.684 | 0.231 | 22.5 | 19.47 | 2032 | -- | -- |
| 13.13 | 0.169 | 10.1 | -0.115 | 0.273 | 0.543 | -- | -- | 0.242 | 22.2 | 19.1 | 2795 | -- | -- |
| 16.45 | 0.189 | 10.1 | -0.181 | -- | 0.448 | -- | -0.586 | 0.226 | -- | 19.11 | 2227 | -- | -- |
| 17.77 | 0.198 | 10.1 | 0.149 | 0.278 | -- | -0.0781 | -- | 0.352 | 22.5 | -- | -- | -- | -- |
| 17.8 | 0.198 | 10.1 | 0.153 | 0.279 | -- | -- | -- | 0.353 | 22.5 | -- | -- | -- | -- |
| 17.08 | 0.192 | 10.1 | -0.0979 | -- | 0.498 | -- | -- | 0.27 | -- | 19.1 | 2294 | -- | -- |
| 13.27 | 0.17 | 10.1 | -- | 0.257 | 0.484 | -- | -- | 0.267 | 22.4 | 19.04 | 2070 | -- | -- |
| 22.57 | 0.222 | 10.1 | 0.157 | -- | -- | -- | -- | 0.354 | -- | -- | -- | -- | -- |
| 18.41 | 0.201 | 10.1 | -- | 0.28 | -- | -- | -- | 0.336 | 22.5 | -- | -- | -- | -- |
| 17.16 | 0.193 | 10.1 | -- | -- | 0.516 | -- | -- | 0.261 | -- | 19.1 | 2172 | -- | -- |
| 23.22 | 0.225 | 10.1 | -- | -- | -- | -- | -- | 0.336 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 12.08 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 2 |
| 2 | 12.09 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 2 |
| 5 | 12.38 | temperature | 20 | 1440 | < th | dose independent | rect. | 21 | 11 |
| 10 | 12.40 | temperature | 20 | 1440 | > th | dose independent | rect. | 21 | 12 |
| 30 | 12.46 | temperature | 20 | 1440 | < th | dose independent | sin | 8 | NA |
| 33 | 12.47 | temperature | 20 | 1440 | > th | dose independent | sin | 8 | NA |
| 37 | 12.47 | temperature | 20 | 1440 | < th | dose independent | rect. | 2 | 6 |
| 59 | 12.50 | temperature | 20 | 1440 | < th | dose independent | rect. | 21 | 6 |
| 60 | 12.50 | temperature | 20 | 1440 | > th | dose independent | rect. | 1 | 8 |
| 63 | 12.51 | temperature | 20 | 1440 | < th | dose independent | rect. | 22 | 3 |
| 64 | 12.51 | temperature | 20 | 4320 | > th | dose independent | rect. | 19 | 4 |
| 65 | 12.51 | temperature | 20 | 1440 | > th | dose independent | rect. | 21 | 4 |
| 70 | 12.51 | temperature | 20 | 1440 | > th | dose independent | rect. | 2 | 6 |
| 114 | 12.55 | temperature | 20 | 4320 | > th | dose independent | rect. | 20 | 2 |
| 127 | 12.57 | temperature | 20 | 4320 | < th | dose independent | rect. | 19 | 4 |
| 252 | 12.70 | humidity | 90 | 14400 | > th | dose dependent | rect. | 24 | 19 |
| 263 | 12.71 | humidity | 90 | 14400 | > th | dose dependent | rect. | 24 | 17 |
| 298 | 12.74 | temperature | 25 | 1440 | < th | dose dependent | rect. | 24 | 9 |
| 300 | 12.74 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 12 |
| 302 | 12.74 | humidity | 90 | 14400 | > th | dose dependent | rect. | 2 | 14 |
| 368 | 12.78 | temperature | 20 | 1440 | > th | dose independent | rect. | 12 | 19 |
| 388 | 12.79 | temperature | 20 | 1440 | < th | dose independent | rect. | 12 | 19 |
| 391 | 12.79 | humidity | 90 | 14400 | > th | dose dependent | sin | 4 | NA |
| 392 | 12.79 | temperature | 15 | 1440 | > th | dose dependent | rect. | 24 | 6 |
| 400 | 12.79 | humidity | 90 | 14400 | > th | dose dependent | rect. | 12 | 16 |
| 422 | 12.80 | temperature | 25 | 1440 | < th | dose dependent | sin | 9 | NA |
| 424 | 12.80 | temperature | 20 | 1440 | < th | dose dependent | rect. | 3 | 2 |
| 425 | 12.80 | temperature | 15 | 1440 | > th | dose dependent | rect. | 24 | 4 |
| 440 | 12.80 | humidity | 90 | 14400 | > th | dose dependent | rect. | 12 | 20 |
| 484 | 12.82 | radiation | 30 | 4320 | < th | dose independent | rect. | 16 | 16 |
| 487 | 12.82 | humidity | 90 | 14400 | > th | dose dependent | rect. | 5 | 2 |
| 489 | 12.82 | temperature | 30 | 1440 | < th | dose dependent | rect. | 24 | 4 |
| 573 | 12.84 | temperature | 30 | 1440 | < th | dose dependent | rect. | 24 | 1 |
| 610 | 12.84 | humidity | 90 | 14400 | > th | dose dependent | rect. | 18 | 22 |
| 620 | 12.85 | temperature | 30 | 1440 | < th | dose dependent | rect. | 5 | 1 |
| 668 | 12.86 | humidity | 90 | 14400 | > th | dose dependent | no | NA | NA |
| 699 | 12.86 | humidity | 90 | 14400 | > th | dose dependent | rect. | 15 | 23 |
| 755 | 12.88 | temperature | 10 | 1440 | > th | dose dependent | rect. | 5 | 1 |
| 859 | 12.90 | humidity | 90 | 14400 | > th | dose dependent | rect. | 3 | 8 |
| 913 | 12.91 | humidity | 90 | 14400 | > th | dose dependent | rect. | 2 | 23 |
| 921 | 12.92 | humidity | 90 | 14400 | > th | dose dependent | sin | 14 | NA |
| 959 | 12.93 | temperature | 25 | 1440 | < th | dose dependent | rect. | 7 | 2 |