Os03g0363700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Tetratricopeptide-like helical domain containing protein.
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Os03g0363700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Tetratricopeptide-like helical domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 204.55 | 0.672 | 5.47 | 1.93 | 1.69 | 1.25 | 0.679 | -0.654 | 0.452 | 17.7 | 49.67 | 1283 | -- | -- |
| 205.14 | 0.667 | 5.47 | 1.87 | 1.69 | 1.24 | 0.667 | -- | 0.439 | 17.7 | 52 | 1270 | -- | -- |
| 205.65 | 0.668 | 5.47 | 1.92 | 1.7 | 1.25 | -- | -0.581 | 0.453 | 17.7 | 49.05 | 1278 | -- | -- |
| 206.15 | 0.669 | 5.47 | 1.86 | 1.7 | 1.23 | -- | -- | 0.446 | 17.7 | 51.94 | 1268 | -- | -- |
| 351.25 | 0.878 | 5.46 | 1.78 | -- | -1.15 | -- | -1.29 | 0.338 | -- | 51.77 | 1280 | -- | -- |
| 237.32 | 0.722 | 5.48 | 1.79 | 1.8 | -- | 0.779 | -- | 0.389 | 17.3 | -- | -- | -- | -- |
| 238.82 | 0.724 | 5.48 | 1.79 | 1.81 | -- | -- | -- | 0.392 | 17.3 | -- | -- | -- | -- |
| 353.53 | 0.876 | 5.44 | 1.83 | -- | 1.54 | -- | -- | 0.426 | -- | 53.4 | 1281 | -- | -- |
| 287.32 | 0.789 | 5.45 | -- | 1.8 | 1.48 | -- | -- | 0.428 | 17.3 | 81.15 | 1450 | -- | -- |
| 409.47 | 0.946 | 5.46 | 1.72 | -- | -- | -- | -- | 0.347 | -- | -- | -- | -- | -- |
| 322.82 | 0.84 | 5.53 | -- | 1.78 | -- | -- | -- | 0.193 | 17.4 | -- | -- | -- | -- |
| 431.3 | 0.967 | 5.45 | -- | -- | 1.98 | -- | -- | 0.389 | -- | 76.99 | 1303 | -- | -- |
| 487.83 | 1.03 | 5.5 | -- | -- | -- | -- | -- | 0.156 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 202.68 | humidity | 8e+01 | 720 | < th | dose dependent | rect. | 20 | 1 |
| 2 | 203.04 | humidity | 8e+01 | 1440 | < th | dose independent | rect. | 19 | 20 |
| 3 | 203.09 | humidity | 8e+01 | 1440 | > th | dose independent | rect. | 19 | 21 |
| 5 | 203.41 | humidity | 8e+01 | 1440 | > th | dose independent | rect. | 24 | 22 |
| 10 | 203.69 | humidity | 5e+01 | 1440 | > th | dose dependent | rect. | 12 | 20 |
| 20 | 203.88 | humidity | 8e+01 | 1440 | < th | dose independent | rect. | 2 | 20 |
| 36 | 204.11 | humidity | 8e+01 | 1440 | < th | dose independent | rect. | 5 | 17 |
| 56 | 204.40 | humidity | 5e+01 | 1440 | > th | dose dependent | sin | 14 | NA |
| 59 | 204.43 | humidity | 8e+01 | 720 | < th | dose dependent | rect. | 19 | 3 |
| 95 | 204.87 | humidity | 8e+01 | 1440 | > th | dose independent | rect. | 9 | 23 |
| 106 | 205.04 | humidity | 8e+01 | 720 | < th | dose dependent | rect. | 18 | 14 |
| 115 | 205.08 | humidity | 8e+01 | 1440 | > th | dose independent | rect. | 6 | 21 |
| 124 | 205.11 | humidity | 8e+01 | 1440 | > th | dose independent | rect. | 11 | 23 |
| 131 | 205.14 | humidity | 9e+01 | 720 | > th | dose dependent | rect. | 20 | 5 |
| 143 | 205.23 | humidity | 8e+01 | 1440 | > th | dose independent | no | NA | NA |
| 144 | 205.23 | humidity | 8e+01 | 1440 | < th | dose independent | rect. | 6 | 21 |
| 170 | 205.37 | humidity | 6e+01 | 720 | > th | dose dependent | rect. | 18 | 7 |
| 182 | 205.45 | humidity | 8e+01 | 1440 | < th | dose independent | no | NA | NA |
| 186 | 205.47 | humidity | 9e+01 | 1440 | < th | dose dependent | rect. | 14 | 18 |
| 189 | 205.50 | humidity | 8e+01 | 1440 | < th | dose independent | rect. | 11 | 23 |
| 204 | 205.59 | humidity | 6e+01 | 1440 | > th | dose dependent | rect. | 18 | 22 |
| 269 | 206.01 | atmosphere | 1e+03 | 90 | > th | dose independent | rect. | 21 | 6 |
| 300 | 206.17 | humidity | 8e+01 | 1440 | > th | dose independent | rect. | 9 | 13 |
| 316 | 206.26 | humidity | 6e+01 | 720 | > th | dose dependent | rect. | 18 | 9 |
| 339 | 206.37 | humidity | 5e+01 | 1440 | > th | dose dependent | no | NA | NA |
| 342 | 206.38 | atmosphere | 1e+03 | 10 | > th | dose independent | rect. | 22 | 6 |
| 362 | 206.46 | humidity | 8e+01 | 1440 | < th | dose independent | sin | 23 | NA |
| 367 | 206.48 | humidity | 9e+01 | 720 | > th | dose dependent | rect. | 22 | 2 |
| 384 | 206.54 | humidity | 5e+01 | 1440 | > th | dose dependent | rect. | 23 | 23 |
| 386 | 206.55 | humidity | 5e+01 | 1440 | > th | dose dependent | rect. | 5 | 23 |
| 402 | 206.65 | humidity | 9e+01 | 1440 | < th | dose dependent | sin | 14 | NA |
| 416 | 206.70 | humidity | 8e+01 | 1440 | > th | dose independent | sin | 23 | NA |
| 417 | 206.70 | humidity | 8e+01 | 1440 | < th | dose dependent | sin | 12 | NA |
| 504 | 206.99 | humidity | 7e+01 | 720 | > th | dose dependent | rect. | 19 | 4 |
| 597 | 207.33 | atmosphere | 1e+03 | 270 | > th | dose independent | rect. | 19 | 7 |
| 640 | 207.44 | humidity | 8e+01 | 1440 | < th | dose independent | rect. | 2 | 14 |
| 660 | 207.48 | humidity | 6e+01 | 1440 | > th | dose dependent | rect. | 19 | 2 |
| 744 | 207.72 | humidity | 8e+01 | 1440 | > th | dose independent | rect. | 1 | 15 |
| 795 | 207.84 | humidity | 8e+01 | 1440 | < th | dose independent | rect. | 5 | 11 |
| 819 | 207.89 | humidity | 8e+01 | 720 | < th | dose independent | rect. | 19 | 2 |
| 825 | 207.91 | radiation | 3e+01 | 14400 | < th | dose independent | rect. | 17 | 6 |
| 888 | 208.06 | precipitation | 1e-01 | 270 | < th | dose independent | rect. | 15 | 15 |
| 889 | 208.06 | precipitation | 1e-01 | 270 | < th | dose dependent | rect. | 15 | 15 |