Os03g0363200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description :
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Os03g0363200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description :
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 29.42 | 0.255 | 3.03 | 0.0114 | 0.0671 | 0.595 | -0.177 | 0.647 | -0.06 | 6.13 | 0.7365 | 839 | -- | -- |
| 29.42 | 0.253 | 3.03 | -0.00454 | 0.0673 | 0.773 | -0.177 | -- | -0.0599 | 6.13 | 0.6909 | 835 | -- | -- |
| 29.49 | 0.253 | 3.03 | 0.0107 | 0.0669 | 0.58 | -- | 0.681 | -0.0596 | 5.63 | 0.7335 | 828 | -- | -- |
| 29.49 | 0.253 | 3.03 | -0.00603 | 0.067 | 0.768 | -- | -- | -0.0594 | 5.65 | 0.6852 | 837 | -- | -- |
| 29.72 | 0.254 | 3.03 | 0.0151 | -- | 0.553 | -- | 0.797 | -0.0579 | -- | 0.7656 | 823 | -- | -- |
| 33.43 | 0.271 | 3.04 | 0.0741 | 0.0773 | -- | -0.051 | -- | -0.0755 | 4.85 | -- | -- | -- | -- |
| 33.44 | 0.271 | 3.04 | 0.0741 | 0.0769 | -- | -- | -- | -0.0753 | 4.43 | -- | -- | -- | -- |
| 29.72 | 0.254 | 3.03 | -0.00433 | -- | 0.772 | -- | -- | -0.0578 | -- | 0.8924 | 803 | -- | -- |
| 29.49 | 0.253 | 3.03 | -- | 0.0669 | 0.766 | -- | -- | -0.0589 | 5.65 | 0.7275 | 832 | -- | -- |
| 33.75 | 0.271 | 3.04 | 0.0771 | -- | -- | -- | -- | -0.0732 | -- | -- | -- | -- | -- |
| 33.58 | 0.271 | 3.04 | -- | 0.0783 | -- | -- | -- | -0.0835 | 4.41 | -- | -- | -- | -- |
| 29.72 | 0.254 | 3.03 | -- | -- | 0.771 | -- | -- | -0.0574 | -- | 0.9022 | 812 | -- | -- |
| 33.91 | 0.272 | 3.04 | -- | -- | -- | -- | -- | -0.0818 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 22.35 | temperature | 20.0 | 10 | < th | dose independent | rect. | 11 | 1 |
| 7 | 22.35 | humidity | 90.0 | 90 | > th | dose independent | rect. | 10 | 1 |
| 9 | 22.35 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 10 | 1 |
| 24 | 22.35 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 11 | 1 |
| 30 | 22.35 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 10 | 1 |
| 32 | 22.35 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 10 | 1 |
| 132 | 28.56 | temperature | 15.0 | 720 | < th | dose dependent | rect. | 24 | 1 |
| 133 | 28.57 | temperature | 15.0 | 720 | < th | dose independent | rect. | 1 | 1 |
| 140 | 28.69 | temperature | 15.0 | 720 | < th | dose dependent | rect. | 24 | 14 |
| 227 | 29.56 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 3 | 17 |
| 229 | 29.56 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 3 | 17 |
| 240 | 29.64 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 16 | 12 |
| 244 | 29.68 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 23 | 21 |
| 251 | 29.72 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 16 | 12 |
| 256 | 29.72 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 10 | 18 |
| 263 | 29.74 | temperature | 15.0 | 720 | < th | dose independent | sin | 5 | NA |
| 272 | 29.75 | wind | 1.0 | 90 | < th | dose independent | rect. | 24 | 1 |
| 273 | 29.75 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 16 | 4 |
| 285 | 29.75 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 24 | 20 |
| 287 | 29.75 | precipitation | 0.1 | 720 | > th | dose dependent | sin | 14 | NA |
| 292 | 29.76 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 4 | 16 |
| 299 | 29.76 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 14 | 21 |
| 308 | 29.77 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 16 | 4 |
| 318 | 29.77 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 16 | 21 |
| 326 | 29.78 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 16 | 19 |
| 336 | 29.79 | temperature | 15.0 | 720 | < th | dose dependent | sin | 4 | NA |
| 350 | 29.80 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 11 | 9 |
| 353 | 29.80 | precipitation | 0.1 | 720 | > th | dose dependent | no | NA | NA |
| 355 | 29.80 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 11 | 9 |
| 373 | 29.81 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 16 | 9 |
| 400 | 29.83 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 7 | 13 |
| 407 | 29.85 | precipitation | 0.1 | 720 | > th | dose independent | sin | 15 | NA |
| 419 | 29.86 | precipitation | 0.1 | 720 | < th | dose independent | sin | 15 | NA |
| 421 | 29.86 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 10 | 10 |
| 425 | 29.86 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 10 | 18 |
| 427 | 29.86 | precipitation | 0.1 | 720 | < th | dose dependent | sin | 15 | NA |
| 446 | 29.88 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 6 | 14 |
| 484 | 29.94 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 1 | 20 |
| 491 | 29.94 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 1 | 20 |
| 494 | 29.94 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 19 | 23 |
| 536 | 29.98 | wind | 1.0 | 90 | < th | dose dependent | rect. | 24 | 1 |
| 538 | 29.98 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 16 | 9 |
| 563 | 29.99 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 7 | 18 |
| 576 | 30.00 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 10 | 15 |
| 595 | 30.01 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 23 | 22 |
| 611 | 30.01 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 23 | 22 |
| 612 | 30.02 | precipitation | 0.1 | 720 | > th | dose independent | sin | 23 | NA |
| 614 | 30.02 | precipitation | 0.1 | 720 | < th | dose independent | sin | 23 | NA |
| 619 | 30.02 | precipitation | 0.1 | 720 | < th | dose dependent | sin | 23 | NA |
| 660 | 30.05 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 15 | 23 |
| 671 | 30.05 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 15 | 23 |
| 675 | 30.06 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 7 | 14 |
| 679 | 30.06 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 17 | 5 |
| 682 | 30.06 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 7 | 14 |
| 695 | 30.08 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 15 | 15 |
| 699 | 30.08 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 15 | 15 |
| 725 | 30.10 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 19 | 2 |
| 749 | 30.14 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 14 | 21 |
| 776 | 30.15 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 16 | 21 |
| 788 | 30.16 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 10 | 15 |
| 814 | 30.18 | precipitation | 0.1 | 720 | > th | dose independent | no | NA | NA |
| 815 | 30.18 | precipitation | 0.1 | 720 | < th | dose independent | no | NA | NA |
| 836 | 30.18 | precipitation | 0.1 | 720 | < th | dose dependent | no | NA | NA |
| 852 | 30.19 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 12 | 16 |
| 864 | 30.19 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 12 | 16 |
| 870 | 30.20 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 10 | 12 |
| 977 | 30.30 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 19 | 6 |
| 999 | 30.33 | wind | 1.0 | 720 | < th | dose dependent | rect. | 18 | 1 |