Os03g0363100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Armadillo-like helical domain containing protein.
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Os03g0363100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Armadillo-like helical domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 256.03 | 0.752 | 5.75 | 1.68 | 0.491 | -2.92 | -0.363 | 0.719 | -0.612 | 15.4 | 16.34 | 712 | -- | -- |
| 256.39 | 0.746 | 5.77 | 1.54 | 0.476 | -2.99 | -0.362 | -- | -0.648 | 15.3 | 15.63 | 718 | -- | -- |
| 256.41 | 0.746 | 5.75 | 1.67 | 0.478 | -2.92 | -- | 0.725 | -0.616 | 15.3 | 16.26 | 716 | -- | -- |
| 256.77 | 0.746 | 5.77 | 1.54 | 0.468 | -3.06 | -- | -- | -0.657 | 15.1 | 15.04 | 718 | -- | -- |
| 261.75 | 0.754 | 5.74 | 1.76 | -- | -2.85 | -- | 0.943 | -0.592 | -- | 16.74 | 868 | -- | -- |
| 378.97 | 0.913 | 5.86 | 0.748 | 0.8 | -- | 0.212 | -- | -1.14 | 10.8 | -- | -- | -- | -- |
| 379.15 | 0.912 | 5.86 | 0.757 | 0.799 | -- | -- | -- | -1.13 | 10.9 | -- | -- | -- | -- |
| 262.47 | 0.755 | 5.77 | 1.57 | -- | -2.93 | -- | -- | -0.646 | -- | 16.04 | 857 | -- | -- |
| 309.6 | 0.82 | 5.84 | -- | 0.624 | -2.06 | -- | -- | -0.942 | 14.6 | 19.29 | 600 | -- | -- |
| 418.72 | 0.956 | 5.88 | 0.74 | -- | -- | -- | -- | -1.14 | -- | -- | -- | -- | -- |
| 394.25 | 0.929 | 5.88 | -- | 0.793 | -- | -- | -- | -1.22 | 10.8 | -- | -- | -- | -- |
| 317.95 | 0.83 | 5.82 | -- | -- | -2.04 | -- | -- | -0.902 | -- | 19.6 | 846 | -- | -- |
| 433.16 | 0.971 | 5.9 | -- | -- | -- | -- | -- | -1.22 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 241.44 | temperature | 20 | 720 | > th | dose dependent | rect. | 17 | 17 |
| 7 | 245.46 | temperature | 20 | 720 | > th | dose dependent | sin | 10 | NA |
| 10 | 245.90 | temperature | 20 | 1440 | > th | dose dependent | rect. | 18 | 11 |
| 13 | 246.15 | temperature | 10 | 720 | > th | dose dependent | rect. | 17 | 17 |
| 53 | 248.06 | temperature | 20 | 1440 | > th | dose dependent | rect. | 1 | 6 |
| 105 | 249.61 | temperature | 30 | 720 | < th | dose dependent | rect. | 16 | 17 |
| 113 | 249.94 | temperature | 20 | 1440 | > th | dose dependent | rect. | 3 | 2 |
| 134 | 250.52 | temperature | 20 | 1440 | > th | dose dependent | rect. | 20 | 1 |
| 264 | 253.12 | temperature | 25 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 270 | 253.19 | temperature | 25 | 4320 | < th | dose dependent | rect. | 1 | 3 |
| 300 | 253.52 | temperature | 25 | 4320 | < th | dose dependent | rect. | 3 | 1 |
| 302 | 253.56 | temperature | 15 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 306 | 253.60 | temperature | 30 | 1440 | < th | dose dependent | sin | 13 | NA |
| 322 | 253.76 | temperature | 10 | 4320 | > th | dose dependent | rect. | 1 | 3 |
| 331 | 253.80 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 7 |
| 356 | 253.92 | temperature | 10 | 720 | > th | dose dependent | rect. | 17 | 23 |
| 380 | 254.11 | temperature | 10 | 720 | > th | dose dependent | rect. | 6 | 23 |
| 386 | 254.15 | temperature | 10 | 4320 | > th | dose dependent | rect. | 3 | 1 |
| 412 | 254.30 | temperature | 10 | 4320 | > th | dose dependent | rect. | 21 | 7 |
| 437 | 254.44 | temperature | 10 | 720 | > th | dose dependent | rect. | 8 | 23 |
| 673 | 255.61 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 23 |
| 805 | 256.19 | temperature | 15 | 720 | > th | dose dependent | no | NA | NA |
| 817 | 256.27 | temperature | 15 | 720 | > th | dose dependent | rect. | 19 | 23 |
| 963 | 256.87 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 1 |