Os03g0362200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Armadillo-like helical domain containing protein.
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Os03g0362200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Armadillo-like helical domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 260.93 | 0.759 | 9.79 | 1.54 | 3.34 | -2.6 | 2.13 | 4.17 | 0.772 | 18.8 | 24.96 | 1412 | -- | -- |
| 249.72 | 0.736 | 9.76 | 0.93 | 3.37 | -2.53 | 2.06 | -- | 1.21 | 18.7 | 21.58 | 8607 | -- | -- |
| 272.45 | 0.769 | 9.78 | 1.55 | 3.35 | -2.6 | -- | 4.32 | 0.765 | 18.8 | 25.14 | 1412 | -- | -- |
| 261.63 | 0.753 | 9.77 | 0.778 | 3.34 | -2.46 | -- | -- | 1.17 | 18.7 | 22.24 | 8598 | -- | -- |
| 846.27 | 1.35 | 9.67 | 1.64 | -- | -2.92 | -- | 4.29 | 0.926 | -- | 23.9 | 1363 | -- | -- |
| 464.83 | 1.01 | 9.99 | -0.398 | 3.42 | -- | 2.35 | -- | 0.193 | 18.5 | -- | -- | -- | -- |
| 478.64 | 1.02 | 9.99 | -0.431 | 3.43 | -- | -- | -- | 0.2 | 18.5 | -- | -- | -- | -- |
| 843.05 | 1.35 | 9.7 | 0.686 | -- | -2.54 | -- | -- | 1.13 | -- | 23 | 8559 | -- | -- |
| 272.92 | 0.769 | 9.81 | -- | 3.34 | -2.2 | -- | -- | 0.981 | 18.7 | 23.41 | 8560 | -- | -- |
| 1089.68 | 1.54 | 9.92 | -0.516 | -- | -- | -- | -- | 0.129 | -- | -- | -- | -- | -- |
| 483.53 | 1.03 | 9.98 | -- | 3.43 | -- | -- | -- | 0.248 | 18.5 | -- | -- | -- | -- |
| 852.01 | 1.36 | 9.74 | -- | -- | -2.31 | -- | -- | 0.946 | -- | 24.69 | 8569 | -- | -- |
| 1096.69 | 1.55 | 9.91 | -- | -- | -- | -- | -- | 0.187 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 256.12 | humidity | 90 | 43200 | > th | dose independent | rect. | 21 | 2 |
| 2 | 256.45 | temperature | 20 | 14400 | > th | dose dependent | rect. | 19 | 1 |
| 3 | 257.04 | radiation | 1 | 1440 | < th | dose dependent | rect. | 18 | 11 |
| 5 | 257.17 | temperature | 20 | 14400 | > th | dose dependent | rect. | 18 | 4 |
| 15 | 257.77 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 25 | 257.82 | temperature | 30 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 27 | 257.93 | radiation | 1 | 1440 | < th | dose dependent | rect. | 18 | 2 |
| 43 | 258.74 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 21 |
| 46 | 259.06 | humidity | 90 | 43200 | > th | dose dependent | rect. | 21 | 2 |
| 52 | 259.29 | temperature | 30 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 53 | 259.32 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 10 |
| 56 | 259.38 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 58 | 259.38 | radiation | 1 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 63 | 259.45 | temperature | 25 | 1440 | > th | dose dependent | rect. | 7 | 14 |
| 86 | 259.67 | radiation | 1 | 14400 | < th | dose dependent | rect. | 18 | 4 |
| 91 | 259.72 | humidity | 90 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 137 | 260.29 | temperature | 25 | 1440 | > th | dose dependent | rect. | 16 | 4 |
| 144 | 260.40 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 6 |
| 175 | 260.75 | temperature | 25 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 198 | 261.04 | temperature | 25 | 1440 | > th | dose dependent | sin | 21 | NA |
| 216 | 261.20 | radiation | 20 | 14400 | < th | dose dependent | rect. | 18 | 10 |
| 217 | 261.21 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 253 | 261.58 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 23 |
| 312 | 262.36 | wind | 5 | 43200 | > th | dose dependent | rect. | 9 | 6 |
| 339 | 262.60 | temperature | 25 | 14400 | < th | dose independent | rect. | 17 | 4 |
| 343 | 262.62 | temperature | 25 | 14400 | > th | dose independent | rect. | 17 | 4 |
| 363 | 262.90 | temperature | 20 | 14400 | > th | dose dependent | sin | 15 | NA |
| 402 | 263.39 | wind | 5 | 43200 | > th | dose dependent | rect. | 5 | 10 |
| 407 | 263.41 | wind | 7 | 43200 | < th | dose independent | rect. | 4 | 11 |
| 422 | 263.53 | humidity | 70 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 439 | 263.65 | humidity | 90 | 43200 | > th | dose independent | rect. | 9 | 2 |
| 450 | 263.77 | wind | 7 | 43200 | > th | dose independent | rect. | 4 | 11 |
| 470 | 263.95 | humidity | 90 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 509 | 264.16 | temperature | 25 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 522 | 264.26 | temperature | 25 | 4320 | < th | dose independent | rect. | 6 | 5 |
| 526 | 264.31 | wind | 5 | 43200 | > th | dose dependent | rect. | 10 | 4 |
| 531 | 264.38 | temperature | 25 | 14400 | < th | dose independent | rect. | 16 | 8 |
| 532 | 264.40 | humidity | 90 | 43200 | < th | dose independent | rect. | 21 | 2 |
| 559 | 264.57 | humidity | 90 | 43200 | > th | dose dependent | rect. | 18 | 6 |
| 587 | 264.81 | wind | 7 | 43200 | > th | dose independent | rect. | 24 | 15 |
| 601 | 264.91 | humidity | 90 | 43200 | > th | dose independent | rect. | 18 | 5 |
| 608 | 264.98 | temperature | 25 | 14400 | > th | dose independent | rect. | 16 | 8 |
| 749 | 265.97 | temperature | 25 | 4320 | > th | dose independent | rect. | 6 | 5 |
| 780 | 266.13 | temperature | 25 | 14400 | < th | dose independent | sin | 16 | NA |
| 781 | 266.14 | temperature | 25 | 14400 | < th | dose independent | rect. | 4 | 20 |
| 782 | 266.14 | temperature | 25 | 14400 | < th | dose independent | rect. | 17 | 22 |
| 794 | 266.18 | temperature | 25 | 14400 | > th | dose independent | rect. | 17 | 22 |
| 807 | 266.25 | humidity | 70 | 14400 | < th | dose independent | rect. | 19 | 1 |
| 811 | 266.29 | temperature | 25 | 14400 | < th | dose independent | rect. | 15 | 21 |
| 825 | 266.37 | temperature | 25 | 14400 | > th | dose independent | sin | 16 | NA |
| 857 | 266.45 | temperature | 25 | 14400 | > th | dose independent | rect. | 4 | 20 |
| 886 | 266.54 | temperature | 30 | 14400 | < th | dose dependent | rect. | 21 | 2 |
| 891 | 266.56 | wind | 3 | 43200 | > th | dose dependent | rect. | 11 | 1 |
| 901 | 266.58 | temperature | 25 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 921 | 266.63 | temperature | 25 | 14400 | < th | dose independent | rect. | 7 | 23 |
| 932 | 266.65 | temperature | 20 | 14400 | > th | dose dependent | rect. | 4 | 20 |
| 961 | 266.73 | temperature | 25 | 14400 | < th | dose independent | rect. | 7 | 19 |