Os03g0360200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os03g0360200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 281.4 | 0.788 | 4.68 | 1.06 | 0.844 | 2.76 | 0.643 | 5.93 | 0.0397 | 2.67 | 23.87 | 3526 | -- | -- |
| 299.45 | 0.806 | 4.52 | 1.78 | 1.03 | 2.03 | 0.464 | -- | 0.144 | 2.86 | 34.6 | 1213 | -- | -- |
| 282.58 | 0.783 | 4.68 | 1.04 | 0.831 | 2.74 | -- | 5.87 | 0.0237 | 2.84 | 23.9 | 3363 | -- | -- |
| 300.19 | 0.807 | 4.52 | 1.83 | 1.03 | 2.12 | -- | -- | 0.149 | 2.36 | 38.19 | 1099 | -- | -- |
| 321.1 | 0.835 | 4.68 | 1.02 | -- | 2.68 | -- | 5.93 | 0.0354 | -- | 23.77 | 3288 | -- | -- |
| 368.23 | 0.9 | 4.6 | 1.23 | 0.778 | -- | 0.539 | -- | -0.212 | 3.08 | -- | -- | -- | -- |
| 369.18 | 0.9 | 4.6 | 1.21 | 0.781 | -- | -- | -- | -0.215 | 3.15 | -- | -- | -- | -- |
| 314.16 | 0.826 | 4.52 | 1.73 | -- | 2.49 | -- | -- | 0.132 | -- | 40.73 | 143 | -- | -- |
| 377.33 | 0.905 | 4.59 | -- | 0.962 | 1.32 | -- | -- | -0.167 | 2.6 | 80.32 | 1088 | -- | -- |
| 403.95 | 0.939 | 4.6 | 1.25 | -- | -- | -- | -- | -0.194 | -- | -- | -- | -- | -- |
| 408.03 | 0.945 | 4.63 | -- | 0.805 | -- | -- | -- | -0.35 | 3.15 | -- | -- | -- | -- |
| 388.35 | 0.918 | 4.58 | -- | -- | 1.92 | -- | -- | -0.123 | -- | 55.87 | 139 | -- | -- |
| 445 | 0.985 | 4.63 | -- | -- | -- | -- | -- | -0.333 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 266.58 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 11 | 7 |
| 6 | 267.14 | wind | 1.0 | 14400 | < th | dose independent | rect. | 21 | 2 |
| 7 | 267.17 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 8 | 267.36 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 11 | 13 |
| 9 | 267.37 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 11 | 11 |
| 11 | 267.37 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 11 | 15 |
| 18 | 267.40 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 16 | 1 |
| 43 | 267.60 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 14 | 4 |
| 55 | 267.64 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 11 | 7 |
| 94 | 268.01 | radiation | 1.0 | 43200 | < th | dose independent | sin | 19 | NA |
| 148 | 268.52 | radiation | 1.0 | 43200 | > th | dose independent | sin | 19 | NA |
| 191 | 269.28 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 21 | 2 |
| 194 | 269.47 | wind | 1.0 | 14400 | < th | dose independent | rect. | 10 | 3 |
| 196 | 269.53 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 20 | 7 |
| 198 | 269.57 | temperature | 25.0 | 4320 | < th | dose dependent | rect. | 1 | 2 |
| 227 | 270.01 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 22 | 1 |
| 228 | 270.01 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 22 | 1 |
| 253 | 270.25 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 11 | 12 |
| 259 | 270.28 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 22 | 1 |
| 260 | 270.28 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 22 | 1 |
| 262 | 270.29 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 20 | 7 |
| 263 | 270.31 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 20 | 7 |
| 264 | 270.31 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 20 | 7 |
| 292 | 270.45 | wind | 1.0 | 14400 | > th | dose independent | rect. | 21 | 5 |
| 317 | 270.66 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 21 | 3 |
| 333 | 270.82 | temperature | 15.0 | 4320 | > th | dose dependent | rect. | 2 | 1 |
| 359 | 270.89 | radiation | 1.0 | 43200 | < th | dose dependent | sin | 19 | NA |
| 362 | 270.91 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 21 | 3 |
| 364 | 270.91 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 21 | 3 |
| 375 | 270.98 | wind | 1.0 | 14400 | < th | dose independent | rect. | 21 | 5 |
| 499 | 271.84 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 1 | 21 |
| 510 | 271.85 | radiation | 1.0 | 43200 | < th | dose independent | no | NA | NA |
| 522 | 271.85 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 21 | 22 |
| 549 | 271.96 | temperature | 15.0 | 4320 | > th | dose dependent | rect. | 23 | 4 |
| 573 | 272.09 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 16 | 23 |
| 575 | 272.10 | radiation | 1.0 | 43200 | > th | dose independent | no | NA | NA |
| 626 | 272.12 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 21 | 12 |
| 628 | 272.13 | wind | 1.0 | 14400 | > th | dose independent | rect. | 11 | 2 |
| 645 | 272.18 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 5 | 2 |
| 670 | 272.28 | temperature | 15.0 | 4320 | > th | dose dependent | rect. | 23 | 7 |
| 679 | 272.33 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 16 | 23 |
| 695 | 272.46 | temperature | 15.0 | 4320 | > th | dose dependent | rect. | 1 | 6 |
| 852 | 273.19 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 5 | 18 |
| 854 | 273.20 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 5 | 14 |
| 940 | 273.51 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 15 | 1 |
| 962 | 273.54 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 21 | 22 |
| 967 | 273.55 | radiation | 1.0 | 43200 | < th | dose dependent | no | NA | NA |
| 988 | 273.61 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 10 | 3 |
| 995 | 273.66 | wind | 1.0 | 14400 | > th | dose independent | rect. | 6 | 20 |
| 998 | 273.67 | wind | 1.0 | 14400 | < th | dose independent | rect. | 6 | 18 |