Os03g0358700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os03g0358700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 110.29 | 0.493 | 12.4 | -0.465 | 1.98 | -0.857 | -0.536 | -0.547 | -0.705 | 10.2 | 20.7 | 1278 | -- | -- |
| 110.69 | 0.49 | 12.4 | -0.383 | 1.97 | -0.755 | -0.421 | -- | -0.685 | 10.1 | 20.9 | 1185 | -- | -- |
| 110.98 | 0.491 | 12.4 | -0.451 | 1.96 | -0.744 | -- | -0.151 | -0.687 | 10.1 | 21.29 | 1140 | -- | -- |
| 111.03 | 0.491 | 12.4 | -0.409 | 1.96 | -0.736 | -- | -- | -0.673 | 10.1 | 21.25 | 1130 | -- | -- |
| 324.71 | 0.839 | 12.4 | -0.153 | -- | -1.12 | -- | 0.281 | -0.482 | -- | 21.8 | 872 | -- | -- |
| 126.41 | 0.527 | 12.5 | -0.687 | 2.02 | -- | -0.504 | -- | -0.874 | 10.3 | -- | -- | -- | -- |
| 127.42 | 0.529 | 12.5 | -0.707 | 2.02 | -- | -- | -- | -0.875 | 10.2 | -- | -- | -- | -- |
| 324.01 | 0.838 | 12.5 | -0.333 | -- | -1.19 | -- | -- | -0.601 | -- | 21.39 | 849 | -- | -- |
| 115.05 | 0.5 | 12.4 | -- | 1.95 | -0.861 | -- | -- | -0.625 | 10.1 | 21.29 | 1143 | -- | -- |
| 376.53 | 0.907 | 12.5 | -0.737 | -- | -- | -- | -- | -0.88 | -- | -- | -- | -- | -- |
| 140.61 | 0.555 | 12.5 | -- | 2.03 | -- | -- | -- | -0.796 | 10.3 | -- | -- | -- | -- |
| 325.39 | 0.84 | 12.4 | -- | -- | -1.3 | -- | -- | -0.494 | -- | 21.35 | 870 | -- | -- |
| 390.86 | 0.923 | 12.5 | -- | -- | -- | -- | -- | -0.798 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 108.10 | humidity | 50 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 2 | 108.16 | humidity | 50 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 3 | 109.02 | temperature | 20 | 1440 | > th | dose independent | rect. | 20 | 8 |
| 4 | 109.06 | temperature | 20 | 1440 | > th | dose independent | rect. | 20 | 10 |
| 5 | 109.11 | temperature | 20 | 1440 | > th | dose independent | rect. | 20 | 6 |
| 9 | 109.18 | temperature | 20 | 1440 | < th | dose independent | rect. | 20 | 10 |
| 12 | 109.30 | temperature | 20 | 1440 | < th | dose independent | rect. | 20 | 8 |
| 21 | 109.38 | temperature | 20 | 1440 | < th | dose independent | rect. | 20 | 6 |
| 23 | 109.39 | humidity | 50 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 27 | 109.44 | wind | 1 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 47 | 109.75 | temperature | 30 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 76 | 110.06 | temperature | 20 | 1440 | > th | dose independent | rect. | 23 | 2 |
| 88 | 110.18 | temperature | 20 | 1440 | > th | dose independent | sin | 12 | NA |
| 90 | 110.18 | temperature | 25 | 270 | > th | dose dependent | rect. | 18 | 20 |
| 116 | 110.43 | temperature | 20 | 1440 | < th | dose independent | rect. | 23 | 2 |
| 122 | 110.45 | temperature | 20 | 1440 | < th | dose independent | sin | 12 | NA |
| 151 | 110.62 | wind | 3 | 1440 | < th | dose independent | rect. | 8 | 1 |
| 164 | 110.71 | temperature | 20 | 1440 | > th | dose independent | rect. | 1 | 1 |
| 169 | 110.73 | wind | 3 | 1440 | < th | dose dependent | rect. | 8 | 3 |
| 189 | 110.86 | temperature | 20 | 1440 | < th | dose independent | rect. | 1 | 1 |
| 199 | 110.90 | wind | 9 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 207 | 110.94 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 229 | 111.06 | temperature | 25 | 270 | > th | dose dependent | rect. | 9 | 4 |
| 232 | 111.08 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 239 | 111.10 | temperature | 25 | 270 | > th | dose dependent | rect. | 1 | 12 |
| 243 | 111.13 | temperature | 25 | 270 | > th | dose dependent | rect. | 4 | 9 |
| 252 | 111.15 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 259 | 111.17 | wind | 3 | 1440 | < th | dose dependent | rect. | 8 | 1 |
| 264 | 111.21 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 2 |
| 295 | 111.32 | wind | 3 | 1440 | < th | dose dependent | rect. | 10 | 1 |
| 325 | 111.38 | temperature | 25 | 720 | < th | dose independent | rect. | 6 | 8 |
| 350 | 111.49 | wind | 3 | 1440 | > th | dose independent | rect. | 8 | 1 |
| 383 | 111.62 | temperature | 25 | 720 | > th | dose independent | rect. | 6 | 9 |
| 384 | 111.62 | temperature | 25 | 720 | > th | dose independent | rect. | 4 | 11 |
| 428 | 111.78 | temperature | 15 | 270 | > th | dose dependent | rect. | 9 | 15 |
| 441 | 111.83 | wind | 3 | 1440 | < th | dose independent | rect. | 8 | 3 |
| 460 | 111.90 | humidity | 70 | 720 | > th | dose independent | rect. | 18 | 10 |
| 468 | 111.91 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 480 | 111.94 | temperature | 20 | 720 | > th | dose independent | rect. | 4 | 18 |
| 484 | 111.95 | temperature | 25 | 720 | < th | dose independent | rect. | 2 | 13 |
| 563 | 112.18 | temperature | 25 | 270 | > th | dose dependent | sin | 5 | NA |
| 564 | 112.19 | temperature | 20 | 1440 | > th | dose independent | no | NA | NA |
| 597 | 112.28 | temperature | 10 | 720 | > th | dose dependent | rect. | 4 | 9 |
| 599 | 112.29 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 23 |
| 604 | 112.31 | temperature | 20 | 1440 | > th | dose independent | rect. | 1 | 23 |
| 632 | 112.39 | temperature | 25 | 270 | < th | dose independent | rect. | 24 | 21 |
| 640 | 112.42 | wind | 3 | 1440 | < th | dose independent | rect. | 10 | 1 |
| 643 | 112.42 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 23 |
| 644 | 112.42 | temperature | 20 | 1440 | > th | dose independent | rect. | 23 | 23 |
| 659 | 112.47 | wind | 3 | 1440 | > th | dose independent | rect. | 8 | 3 |
| 662 | 112.48 | temperature | 20 | 1440 | < th | dose independent | no | NA | NA |
| 673 | 112.51 | temperature | 25 | 720 | < th | dose independent | sin | 3 | NA |
| 703 | 112.59 | radiation | 10 | 1440 | < th | dose independent | rect. | 15 | 4 |
| 705 | 112.59 | radiation | 10 | 1440 | < th | dose independent | rect. | 15 | 12 |
| 709 | 112.59 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 23 |
| 712 | 112.60 | radiation | 10 | 1440 | < th | dose independent | rect. | 15 | 8 |
| 713 | 112.60 | radiation | 10 | 1440 | < th | dose independent | rect. | 15 | 10 |
| 718 | 112.60 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 7 |
| 724 | 112.61 | temperature | 20 | 1440 | < th | dose independent | rect. | 1 | 23 |
| 730 | 112.63 | temperature | 20 | 1440 | < th | dose independent | rect. | 23 | 23 |
| 731 | 112.63 | temperature | 15 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 732 | 112.63 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 773 | 112.76 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 23 |
| 784 | 112.78 | temperature | 25 | 720 | < th | dose dependent | rect. | 5 | 14 |
| 789 | 112.80 | wind | 1 | 90 | < th | dose independent | rect. | 4 | 1 |
| 856 | 112.95 | wind | 1 | 90 | < th | dose dependent | rect. | 4 | 1 |
| 881 | 113.01 | radiation | 20 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 893 | 113.04 | humidity | 80 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 905 | 113.07 | humidity | 70 | 720 | > th | dose independent | rect. | 17 | 13 |
| 910 | 113.08 | radiation | 10 | 1440 | < th | dose independent | sin | 15 | NA |
| 922 | 113.10 | wind | 3 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 925 | 113.10 | temperature | 25 | 720 | < th | dose dependent | sin | 0 | NA |
| 927 | 113.11 | wind | 3 | 1440 | < th | dose independent | rect. | 7 | 6 |
| 935 | 113.12 | humidity | 70 | 720 | > th | dose independent | rect. | 17 | 7 |
| 944 | 113.13 | humidity | 70 | 720 | < th | dose dependent | rect. | 19 | 12 |
| 958 | 113.15 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 14 |
| 959 | 113.16 | humidity | 80 | 1440 | < th | dose independent | rect. | 6 | 6 |
| 977 | 113.18 | humidity | 70 | 720 | < th | dose dependent | rect. | 19 | 1 |
| 1000 | 113.20 | humidity | 70 | 720 | < th | dose independent | rect. | 19 | 12 |