Os03g0358100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Glutathione peroxidase.
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Os03g0358100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Glutathione peroxidase.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 24.91 | 0.235 | 13.6 | 0.0251 | 0.643 | 1.16 | 0.169 | -5.69 | 0.541 | 16.7 | 30.41 | 541 | -- | -- |
| 29.53 | 0.255 | 13.5 | 0.5 | 0.738 | 0.247 | 0.441 | -- | 0.514 | 17.2 | 30.41 | 541 | -- | -- |
| 24.98 | 0.233 | 13.6 | 0.0332 | 0.639 | 1.16 | -- | -5.56 | 0.543 | 16.6 | 30.47 | 536 | -- | -- |
| 25.71 | 0.236 | 13.5 | 0.455 | 0.639 | 0.564 | -- | -- | 0.544 | 16.6 | 30.4 | 559 | -- | -- |
| 38.36 | 0.288 | 13.6 | 0.0161 | -- | 1.17 | -- | -3.2 | 0.39 | -- | 29.51 | 429 | -- | -- |
| 31.05 | 0.261 | 13.5 | 0.523 | 0.784 | -- | 0.517 | -- | 0.496 | 17.1 | -- | -- | -- | -- |
| 31.68 | 0.264 | 13.5 | 0.524 | 0.786 | -- | -- | -- | 0.499 | 17 | -- | -- | -- | -- |
| 36.53 | 0.281 | 13.5 | 0.419 | -- | 0.835 | -- | -- | 0.411 | -- | 28.7 | 458 | -- | -- |
| 31.05 | 0.26 | 13.5 | -- | 0.613 | 0.621 | -- | -- | 0.5 | 16.5 | 30.4 | 557 | -- | -- |
| 64.2 | 0.374 | 13.5 | 0.495 | -- | -- | -- | -- | 0.479 | -- | -- | -- | -- | -- |
| 38.92 | 0.292 | 13.5 | -- | 0.777 | -- | -- | -- | 0.441 | 17 | -- | -- | -- | -- |
| 39.67 | 0.293 | 13.5 | -- | -- | 0.84 | -- | -- | 0.347 | -- | 28.45 | 442 | -- | -- |
| 70.67 | 0.392 | 13.5 | -- | -- | -- | -- | -- | 0.424 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 23.63 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 4 | 14 |
| 3 | 23.87 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 12 | 22 |
| 4 | 24.00 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 13 | 20 |
| 6 | 24.02 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 13 | 12 |
| 21 | 24.19 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 19 | 6 |
| 22 | 24.19 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 19 | 8 |
| 27 | 24.22 | temperature | 30.0 | 270 | < th | dose independent | rect. | 17 | 11 |
| 29 | 24.23 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 21 | 6 |
| 37 | 24.30 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 22 | 21 |
| 64 | 24.49 | temperature | 30.0 | 270 | < th | dose independent | sin | 15 | NA |
| 66 | 24.49 | temperature | 10.0 | 270 | > th | dose dependent | sin | 19 | NA |
| 82 | 24.54 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 23 | 18 |
| 87 | 24.55 | humidity | 60.0 | 270 | > th | dose independent | rect. | 17 | 11 |
| 99 | 24.59 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 6 | 11 |
| 112 | 24.63 | temperature | 30.0 | 270 | > th | dose independent | rect. | 14 | 20 |
| 116 | 24.65 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 24 | 20 |
| 119 | 24.67 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 23 | 2 |
| 124 | 24.68 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 15 | 5 |
| 157 | 24.77 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 15 | 2 |
| 192 | 24.86 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 16 | 4 |
| 196 | 24.87 | temperature | 30.0 | 270 | < th | dose independent | rect. | 10 | 13 |
| 247 | 24.98 | temperature | 30.0 | 270 | > th | dose independent | rect. | 14 | 5 |
| 264 | 24.99 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 4 | 1 |
| 273 | 25.00 | radiation | 1.0 | 270 | < th | dose independent | rect. | 17 | 11 |
| 282 | 25.02 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 16 | 12 |
| 286 | 25.03 | temperature | 30.0 | 270 | < th | dose independent | rect. | 7 | 23 |
| 297 | 25.05 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 307 | 25.07 | wind | 1.0 | 43200 | < th | dose independent | rect. | 4 | 1 |
| 320 | 25.09 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 7 | 7 |
| 337 | 25.11 | wind | 7.0 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 338 | 25.11 | temperature | 30.0 | 270 | > th | dose independent | rect. | 15 | 2 |
| 358 | 25.15 | temperature | 30.0 | 270 | > th | dose independent | sin | 14 | NA |
| 422 | 25.21 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 5 | 19 |
| 425 | 25.22 | temperature | 10.0 | 720 | > th | dose dependent | sin | 2 | NA |
| 430 | 25.23 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 12 | 6 |
| 437 | 25.24 | humidity | 60.0 | 270 | > th | dose independent | sin | 12 | NA |
| 452 | 25.25 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 11 | 18 |
| 453 | 25.25 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 9 | 19 |
| 456 | 25.26 | temperature | 30.0 | 720 | < th | dose independent | rect. | 2 | 10 |
| 480 | 25.28 | wind | 7.0 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 533 | 25.33 | humidity | 50.0 | 270 | > th | dose independent | sin | 20 | NA |
| 535 | 25.33 | temperature | 30.0 | 720 | < th | dose independent | rect. | 9 | 6 |
| 543 | 25.34 | wind | 7.0 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 576 | 25.37 | temperature | 25.0 | 10 | > th | dose independent | rect. | 16 | 4 |
| 582 | 25.37 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 5 | 11 |
| 608 | 25.40 | radiation | 1.0 | 270 | < th | dose independent | sin | 14 | NA |
| 622 | 25.41 | temperature | 30.0 | 720 | < th | dose independent | rect. | 1 | 12 |
| 633 | 25.42 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 5 | 10 |
| 672 | 25.45 | radiation | 10.0 | 270 | < th | dose dependent | sin | 14 | NA |
| 700 | 25.48 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 6 | 9 |
| 729 | 25.50 | temperature | 30.0 | 720 | < th | dose independent | rect. | 18 | 18 |
| 753 | 25.52 | wind | 1.0 | 43200 | > th | dose independent | rect. | 4 | 1 |
| 762 | 25.52 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 20 | 14 |
| 788 | 25.54 | temperature | 30.0 | 720 | < th | dose independent | rect. | 3 | 18 |
| 809 | 25.55 | wind | 5.0 | 14400 | > th | dose independent | rect. | 11 | 20 |
| 810 | 25.55 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 14 | 1 |
| 851 | 25.57 | temperature | 20.0 | 270 | > th | dose independent | rect. | 13 | 19 |
| 852 | 25.57 | radiation | 1.0 | 270 | < th | dose independent | rect. | 8 | 20 |
| 869 | 25.58 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 20 | 1 |
| 877 | 25.59 | temperature | 20.0 | 270 | > th | dose dependent | no | NA | NA |
| 888 | 25.60 | temperature | 30.0 | 720 | < th | dose independent | rect. | 24 | 15 |
| 889 | 25.60 | wind | 5.0 | 14400 | < th | dose independent | rect. | 11 | 20 |
| 940 | 25.62 | temperature | 30.0 | 720 | < th | dose independent | sin | 0 | NA |
| 941 | 25.62 | wind | 7.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 942 | 25.62 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 982 | 25.62 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 2 | 23 |
| 983 | 25.63 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 992 | 25.63 | temperature | 30.0 | 270 | > th | dose dependent | sin | 14 | NA |