Os03g0355500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os03g0355500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 280.72 | 0.787 | 4.55 | 2.1 | 1.25 | -2.78 | 0.247 | 4.96 | 0.165 | 22.3 | 26.24 | 4307 | -- | -- |
| 280.61 | 0.78 | 4.6 | 1.25 | 1.18 | -2.39 | 0.37 | -- | 0.407 | 22.1 | 22.6 | 5860 | -- | -- |
| 280.96 | 0.781 | 4.55 | 2.1 | 1.25 | -2.78 | -- | 4.98 | 0.166 | 22.3 | 26.24 | 4305 | -- | -- |
| 280.88 | 0.781 | 4.61 | 1.19 | 1.17 | -2.37 | -- | -- | 0.36 | 22.1 | 22.7 | 5860 | -- | -- |
| 367.46 | 0.893 | 4.55 | 2.08 | -- | -2.71 | -- | 5.19 | 0.0568 | -- | 26.6 | 4498 | -- | -- |
| 456.01 | 1 | 4.82 | -0.143 | 1.14 | -- | 0.3 | -- | -0.605 | 21.8 | -- | -- | -- | -- |
| 456.36 | 1 | 4.82 | -0.155 | 1.13 | -- | -- | -- | -0.605 | 21.8 | -- | -- | -- | -- |
| 363.2 | 0.888 | 4.58 | 1.17 | -- | -2.34 | -- | -- | 0.346 | -- | 22.66 | 5873 | -- | -- |
| 309.83 | 0.82 | 4.66 | -- | 1.16 | -1.97 | -- | -- | 0.149 | 22.1 | 22.72 | 5037 | -- | -- |
| 533.18 | 1.08 | 4.79 | -0.143 | -- | -- | -- | -- | -0.606 | -- | -- | -- | -- | -- |
| 456.99 | 1 | 4.82 | -- | 1.13 | -- | -- | -- | -0.588 | 21.8 | -- | -- | -- | -- |
| 391.03 | 0.921 | 4.64 | -- | -- | -1.9 | -- | -- | 0.0594 | -- | 22.8 | 5859 | -- | -- |
| 533.72 | 1.08 | 4.79 | -- | -- | -- | -- | -- | -0.59 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 260.43 | radiation | 1 | 43200 | < th | dose dependent | rect. | 18 | 11 |
| 2 | 260.72 | radiation | 1 | 43200 | < th | dose dependent | rect. | 18 | 5 |
| 3 | 260.74 | radiation | 1 | 43200 | < th | dose dependent | rect. | 18 | 2 |
| 12 | 262.12 | humidity | 80 | 43200 | < th | dose independent | rect. | 13 | 5 |
| 13 | 262.13 | humidity | 80 | 43200 | < th | dose independent | rect. | 11 | 7 |
| 19 | 263.38 | humidity | 90 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 24 | 263.76 | humidity | 80 | 43200 | > th | dose dependent | rect. | 17 | 2 |
| 25 | 263.80 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 16 | 1 |
| 27 | 263.84 | radiation | 1 | 14400 | < th | dose dependent | sin | 2 | NA |
| 30 | 263.96 | humidity | 80 | 43200 | > th | dose independent | rect. | 11 | 8 |
| 32 | 264.07 | humidity | 90 | 43200 | < th | dose independent | rect. | 16 | 8 |
| 36 | 264.20 | humidity | 90 | 43200 | > th | dose independent | rect. | 16 | 9 |
| 39 | 264.26 | radiation | 1 | 14400 | < th | dose dependent | rect. | 5 | 10 |
| 40 | 264.30 | humidity | 90 | 43200 | < th | dose independent | rect. | 16 | 6 |
| 44 | 264.38 | radiation | 1 | 14400 | < th | dose dependent | rect. | 5 | 21 |
| 45 | 264.39 | radiation | 1 | 14400 | < th | dose dependent | rect. | 5 | 19 |
| 51 | 264.42 | radiation | 1 | 14400 | < th | dose dependent | rect. | 5 | 16 |
| 54 | 264.44 | radiation | 1 | 14400 | < th | dose dependent | rect. | 16 | 23 |
| 68 | 264.57 | humidity | 80 | 43200 | > th | dose independent | rect. | 13 | 5 |
| 80 | 264.67 | radiation | 1 | 14400 | < th | dose dependent | rect. | 19 | 20 |
| 84 | 264.68 | radiation | 1 | 14400 | < th | dose dependent | no | NA | NA |
| 87 | 264.68 | radiation | 1 | 14400 | < th | dose dependent | rect. | 1 | 23 |
| 89 | 264.68 | radiation | 1 | 14400 | < th | dose dependent | rect. | 22 | 23 |
| 122 | 264.72 | radiation | 1 | 14400 | < th | dose dependent | rect. | 13 | 23 |
| 140 | 264.77 | radiation | 1 | 14400 | < th | dose dependent | rect. | 11 | 23 |
| 156 | 264.86 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 209 | 265.28 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 210 | 265.28 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 5 |
| 258 | 265.54 | radiation | 1 | 14400 | < th | dose dependent | rect. | 5 | 1 |
| 301 | 265.73 | radiation | 1 | 14400 | < th | dose dependent | sin | 10 | NA |
| 333 | 265.99 | radiation | 1 | 14400 | < th | dose dependent | rect. | 5 | 5 |
| 420 | 266.63 | humidity | 90 | 43200 | > th | dose independent | rect. | 19 | 3 |
| 428 | 266.69 | temperature | 10 | 14400 | > th | dose dependent | rect. | 2 | 1 |
| 431 | 266.71 | humidity | 90 | 43200 | > th | dose independent | rect. | 11 | 15 |
| 443 | 266.78 | temperature | 30 | 14400 | < th | dose dependent | rect. | 2 | 1 |
| 450 | 266.81 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 21 |
| 457 | 266.87 | humidity | 80 | 43200 | > th | dose independent | rect. | 14 | 1 |
| 469 | 266.95 | humidity | 90 | 43200 | < th | dose independent | sin | 18 | NA |
| 496 | 267.18 | humidity | 90 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 582 | 267.70 | radiation | 1 | 14400 | > th | dose independent | rect. | 7 | 12 |
| 614 | 267.84 | radiation | 1 | 14400 | < th | dose dependent | rect. | 13 | 13 |
| 616 | 267.85 | humidity | 90 | 43200 | > th | dose independent | sin | 18 | NA |
| 618 | 267.85 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 21 |
| 638 | 267.93 | radiation | 1 | 14400 | < th | dose dependent | rect. | 13 | 8 |
| 791 | 268.49 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 888 | 268.90 | radiation | 1 | 14400 | < th | dose independent | rect. | 6 | 17 |
| 894 | 268.91 | radiation | 1 | 14400 | < th | dose independent | rect. | 6 | 15 |
| 929 | 269.10 | temperature | 30 | 14400 | < th | dose dependent | rect. | 5 | 1 |
| 961 | 269.26 | temperature | 10 | 14400 | > th | dose dependent | rect. | 5 | 1 |