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Os03g0355100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein of unknown function DUF1618 domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.5 (0.0195) R2 : 0.00371
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0535 (0.0411) R2dN8 : 0.00479 R2N8 : 0.00371
σ : 0.368
deviance : 62.07
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
26.37 0.241 11.4 1.45 0.565 -0.724 -0.446 2.44 0.453 18.3 19.7 1855 -- --
29.27 0.252 11.4 1.08 0.424 -0.773 -0.56 -- 0.379 18 11.42 11346 -- --
26.84 0.241 11.4 1.43 0.55 -0.715 -- 2.35 0.446 18.3 19.57 1767 -- --
28.78 0.25 11.4 1.08 0.495 -0.885 -- -- 0.402 18.5 11.82 10861 -- --
39 0.291 11.3 1.51 -- -0.72 -- 2.32 0.464 -- 17.75 2789 -- --
41.2 0.301 11.5 0.542 0.505 -- -0.356 -- 0.125 18.2 -- -- -- --
41.51 0.302 11.5 0.545 0.503 -- -- -- 0.124 18.2 -- -- -- --
41.03 0.298 11.4 1.11 -- -0.91 -- -- 0.413 -- 10.16 11339 -- --
45.19 0.313 11.5 -- 0.473 -0.334 -- -- 0.124 18.6 21.45 1312 -- --
54.62 0.345 11.5 0.532 -- -- -- -- 0.113 -- -- -- -- --
49.35 0.329 11.5 -- 0.495 -- -- -- 0.0628 18.3 -- -- -- --
56.9 0.351 11.5 -- -- -0.366 -- -- 0.128 -- 21.8 1340 -- --
62.07 0.368 11.5 -- -- -- -- -- 0.0535 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 23.63 radiation 1 14400 > th dose independent rect. 18 11
2 23.71 radiation 1 14400 > th dose independent rect. 18 1
13 24.14 radiation 1 14400 < th dose independent rect. 18 11
16 24.39 radiation 1 14400 < th dose independent rect. 18 2
18 24.39 radiation 1 14400 < th dose independent rect. 18 8
25 24.61 humidity 90 14400 > th dose dependent rect. 21 5
26 24.74 humidity 90 14400 > th dose dependent rect. 20 7
33 24.87 humidity 90 14400 > th dose dependent rect. 16 12
40 24.98 humidity 90 14400 > th dose dependent sin 13 NA
63 25.14 radiation 1 14400 < th dose dependent rect. 18 10
65 25.15 radiation 1 14400 < th dose dependent rect. 18 2
66 25.15 radiation 1 14400 < th dose dependent rect. 18 7
92 25.25 temperature 20 1440 > th dose dependent rect. 18 4
103 25.30 humidity 90 14400 > th dose independent rect. 18 10
108 25.34 humidity 90 43200 > th dose independent rect. 9 1
118 25.39 humidity 90 43200 < th dose independent rect. 9 1
122 25.40 humidity 80 43200 < th dose dependent rect. 22 1
138 25.45 radiation 1 14400 < th dose independent rect. 5 1
143 25.46 radiation 1 14400 > th dose independent rect. 5 1
212 25.65 humidity 90 14400 > th dose dependent rect. 20 20
216 25.66 wind 5 43200 < th dose dependent rect. 11 1
220 25.67 humidity 90 43200 > th dose independent rect. 5 5
241 25.71 humidity 90 14400 < th dose independent rect. 18 10
244 25.71 radiation 1 14400 < th dose dependent rect. 5 1
254 25.73 wind 3 43200 > th dose independent rect. 8 6
261 25.74 humidity 90 14400 > th dose independent sin 13 NA
264 25.74 wind 3 43200 > th dose dependent rect. 5 11
291 25.77 wind 1 43200 > th dose dependent rect. 6 9
296 25.78 wind 3 43200 < th dose independent rect. 8 5
308 25.80 humidity 80 43200 < th dose independent rect. 23 1
314 25.80 humidity 90 43200 > th dose independent rect. 5 19
342 25.86 humidity 80 43200 > th dose dependent rect. 10 1
349 25.87 humidity 90 43200 < th dose independent rect. 5 18
350 25.87 humidity 90 14400 > th dose dependent no NA NA
356 25.88 humidity 90 43200 < th dose independent rect. 5 6
364 25.89 humidity 90 43200 > th dose dependent rect. 6 1
383 25.91 wind 9 43200 < th dose dependent rect. 6 9
393 25.93 humidity 90 43200 > th dose independent rect. 3 13
398 25.94 humidity 90 14400 < th dose independent rect. 20 5
407 25.94 temperature 20 1440 > th dose dependent rect. 15 18
415 25.95 radiation 1 14400 < th dose dependent rect. 23 7
425 25.96 humidity 90 43200 > th dose independent rect. 3 16
430 25.96 radiation 1 14400 < th dose dependent rect. 1 5
437 25.96 humidity 90 14400 > th dose dependent rect. 5 23
439 25.97 humidity 90 43200 > th dose independent sin 2 NA
440 25.97 humidity 90 43200 > th dose independent rect. 22 1
444 25.97 radiation 30 14400 > th dose independent rect. 16 16
466 25.98 radiation 1 1440 < th dose dependent rect. 18 10
495 26.01 humidity 90 43200 > th dose dependent rect. 5 5
508 26.02 wind 9 43200 < th dose independent rect. 18 21
510 26.02 radiation 1 1440 < th dose dependent rect. 18 2
518 26.02 humidity 90 43200 > th dose dependent rect. 4 16
521 26.03 humidity 90 43200 < th dose independent sin 2 NA
535 26.04 humidity 80 43200 > th dose independent rect. 24 1
536 26.04 radiation 30 14400 > th dose independent rect. 7 1
537 26.04 wind 3 43200 > th dose independent rect. 11 2
559 26.04 wind 5 43200 < th dose dependent rect. 8 5
593 26.06 humidity 90 43200 > th dose dependent rect. 5 11
616 26.09 wind 3 43200 < th dose independent rect. 11 1
623 26.09 wind 3 43200 > th dose dependent sin 1 NA
647 26.10 humidity 90 14400 > th dose dependent rect. 3 23
682 26.13 humidity 80 43200 < th dose independent rect. 23 9
717 26.15 humidity 80 43200 > th dose independent rect. 23 8
725 26.15 temperature 20 1440 > th dose dependent sin 14 NA
734 26.16 humidity 80 43200 > th dose independent rect. 23 5
763 26.17 humidity 90 43200 < th dose independent rect. 5 10
764 26.17 wind 9 43200 > th dose independent rect. 19 20
784 26.18 radiation 1 14400 < th dose independent rect. 23 7
813 26.20 radiation 1 14400 < th dose independent rect. 3 3
839 26.21 humidity 90 43200 > th dose dependent sin 1 NA
868 26.23 humidity 90 14400 < th dose independent sin 14 NA
869 26.23 humidity 90 43200 < th dose independent sin 21 NA
871 26.23 humidity 80 43200 > th dose independent rect. 3 1
880 26.23 wind 9 43200 < th dose dependent sin 2 NA
897 26.24 wind 1 43200 > th dose dependent rect. 11 2
931 26.26 humidity 90 43200 < th dose independent rect. 17 4
986 26.29 humidity 90 43200 > th dose independent sin 21 NA
988 26.29 wind 3 43200 < th dose independent rect. 8 2