Os03g0353300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0353300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 270.59 | 0.766 | 3680 | -22500 | 0.212 | 923000 | 0.49 | -5640000 | -0.105 | 18.4 | 995 | 90 | -- | -- |
| 278.66 | 0.783 | 2.91 | -0.0476 | 0.232 | 3.7 | 0.558 | -- | -0.109 | 18.4 | 995 | 90 | -- | -- |
| 271.15 | 0.767 | 3680 | -22500 | 0.214 | 923000 | -- | -5640000 | -0.103 | 18.8 | 995 | 90 | -- | -- |
| 271.02 | 0.767 | 2.91 | -0.0659 | 0.231 | 4.01 | -- | -- | -0.11 | 18.8 | 994.9 | 90 | -- | -- |
| 273.53 | 0.77 | 3680 | -22500 | -- | 923000 | -- | -5640000 | -0.107 | -- | 995 | 90 | -- | -- |
| 293.59 | 0.803 | 2.91 | -0.0198 | 0.272 | -- | 0.724 | -- | -0.119 | 18.2 | -- | -- | -- | -- |
| 294.84 | 0.804 | 2.91 | -0.0282 | 0.277 | -- | -- | -- | -0.117 | 18.5 | -- | -- | -- | -- |
| 273.38 | 0.77 | 2.9 | -0.0723 | -- | 4.13 | -- | -- | -0.108 | -- | 994.9 | 89 | -- | -- |
| 271.14 | 0.767 | 2.91 | -- | 0.226 | 4.01 | -- | -- | -0.108 | 18.8 | 994.9 | 90 | -- | -- |
| 298.83 | 0.808 | 2.91 | -0.0351 | -- | -- | -- | -- | -0.123 | -- | -- | -- | -- | -- |
| 294.86 | 0.803 | 2.91 | -- | 0.277 | -- | -- | -- | -0.114 | 18.5 | -- | -- | -- | -- |
| 273.51 | 0.77 | 2.9 | -- | -- | 4.11 | -- | -- | -0.099 | -- | 994.9 | 91 | -- | -- |
| 298.86 | 0.807 | 2.9 | -- | -- | -- | -- | -- | -0.119 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 265.74 | atmosphere | 1000 | 90 | < th | dose dependent | rect. | 15 | 3 |
| 2 | 265.92 | atmosphere | 1000 | 90 | < th | dose independent | rect. | 16 | 2 |
| 4 | 266.34 | temperature | 30 | 90 | > th | dose independent | rect. | 16 | 1 |
| 5 | 266.74 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 16 | 2 |
| 6 | 266.74 | atmosphere | 1005 | 10 | < th | dose dependent | rect. | 16 | 2 |
| 28 | 267.81 | temperature | 30 | 90 | > th | dose independent | rect. | 16 | 3 |
| 53 | 268.23 | atmosphere | 1000 | 270 | < th | dose dependent | rect. | 14 | 1 |
| 86 | 270.30 | atmosphere | 995 | 10 | > th | dose independent | sin | 15 | NA |
| 99 | 270.56 | temperature | 30 | 270 | > th | dose dependent | rect. | 14 | 1 |
| 111 | 270.95 | atmosphere | 995 | 90 | > th | dose independent | rect. | 3 | 23 |
| 114 | 271.15 | atmosphere | 995 | 30 | < th | dose dependent | sin | 14 | NA |
| 115 | 271.16 | atmosphere | 995 | 30 | < th | dose independent | sin | 15 | NA |
| 121 | 271.18 | atmosphere | 995 | 90 | < th | dose dependent | sin | 17 | NA |
| 166 | 271.21 | atmosphere | 995 | 10 | < th | dose dependent | sin | 11 | NA |
| 201 | 271.37 | atmosphere | 1000 | 270 | < th | dose independent | rect. | 14 | 1 |
| 207 | 271.44 | atmosphere | 995 | 90 | < th | dose dependent | no | NA | NA |
| 406 | 271.54 | atmosphere | 995 | 10 | < th | dose independent | rect. | 17 | 23 |
| 412 | 271.62 | atmosphere | 995 | 90 | < th | dose independent | no | NA | NA |
| 639 | 271.90 | atmosphere | 995 | 10 | > th | dose independent | no | NA | NA |
| 641 | 271.90 | atmosphere | 995 | 10 | < th | dose independent | no | NA | NA |