Os03g0350100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to SAR DNA-binding protein-like protein.
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Os03g0350100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to SAR DNA-binding protein-like protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 113.58 | 0.501 | 10.4 | 1.28 | 1.5 | -0.607 | 0.475 | -0.358 | 0.134 | 17.2 | 70 | 83 | -- | -- |
| 114.03 | 0.497 | 10.4 | 1.27 | 1.51 | -0.603 | 0.627 | -- | 0.132 | 17.2 | 70 | 81 | -- | -- |
| 114.07 | 0.497 | 10.4 | 1.28 | 1.5 | -0.609 | -- | -0.459 | 0.136 | 17.1 | 70 | 81 | -- | -- |
| 115.04 | 0.5 | 10.4 | 1.27 | 1.51 | -0.61 | -- | -- | 0.134 | 17.2 | 70.24 | 81 | -- | -- |
| 172.1 | 0.611 | 10.4 | 1.25 | -- | -1.38 | -- | -0.552 | 0.0373 | -- | 75 | 250 | -- | -- |
| 130.45 | 0.535 | 10.4 | 1.32 | 1.9 | -- | 0.708 | -- | 0.145 | 16.6 | -- | -- | -- | -- |
| 131.77 | 0.538 | 10.4 | 1.32 | 1.9 | -- | -- | -- | 0.149 | 16.6 | -- | -- | -- | -- |
| 174.11 | 0.615 | 10.4 | 1.17 | -- | -1.4 | -- | -- | 0.0591 | -- | 75.09 | 252 | -- | -- |
| 157.64 | 0.585 | 10.4 | -- | 1.43 | -0.683 | -- | -- | -0.00954 | 17.2 | 70.65 | 104 | -- | -- |
| 324.56 | 0.842 | 10.4 | 1.25 | -- | -- | -- | -- | 0.0985 | -- | -- | -- | -- | -- |
| 177.7 | 0.624 | 10.4 | -- | 1.88 | -- | -- | -- | 0.00148 | 16.6 | -- | -- | -- | -- |
| 209.3 | 0.674 | 10.4 | -- | -- | -1.46 | -- | -- | -0.0741 | -- | 75.36 | 278 | -- | -- |
| 365.56 | 0.892 | 10.4 | -- | -- | -- | -- | -- | -0.0398 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 100.49 | humidity | 60.0 | 90 | > th | dose dependent | rect. | 5 | 14 |
| 3 | 101.89 | humidity | 70.0 | 90 | > th | dose independent | rect. | 5 | 14 |
| 4 | 102.53 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 8 | 21 |
| 9 | 103.80 | humidity | 60.0 | 90 | > th | dose dependent | rect. | 5 | 12 |
| 13 | 104.16 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 5 | 14 |
| 21 | 105.16 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 3 | 13 |
| 22 | 105.21 | temperature | 30.0 | 90 | < th | dose independent | rect. | 5 | 14 |
| 30 | 105.71 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 3 | 8 |
| 43 | 106.19 | humidity | 60.0 | 90 | > th | dose dependent | rect. | 5 | 18 |
| 55 | 106.50 | radiation | 40.0 | 270 | < th | dose independent | rect. | 3 | 13 |
| 59 | 106.56 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 3 | 14 |
| 70 | 106.76 | humidity | 70.0 | 90 | > th | dose independent | rect. | 5 | 18 |
| 73 | 106.83 | humidity | 90.0 | 90 | < th | dose dependent | rect. | 8 | 7 |
| 102 | 107.35 | humidity | 60.0 | 90 | > th | dose dependent | sin | 1 | NA |
| 121 | 107.82 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 8 | 7 |
| 122 | 107.83 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 8 | 9 |
| 128 | 107.95 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 23 | 13 |
| 143 | 108.20 | wind | 9.0 | 90 | < th | dose independent | rect. | 8 | 21 |
| 144 | 108.21 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 5 | 3 |
| 150 | 108.35 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 8 | 21 |
| 151 | 108.35 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 8 | 21 |
| 160 | 108.47 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 8 | 7 |
| 173 | 108.64 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 5 | 4 |
| 176 | 108.69 | radiation | 10.0 | 270 | < th | dose independent | rect. | 3 | 6 |
| 184 | 108.81 | humidity | 70.0 | 90 | > th | dose independent | rect. | 5 | 6 |
| 196 | 108.90 | radiation | 20.0 | 270 | < th | dose independent | rect. | 3 | 14 |
| 199 | 108.91 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 5 | 6 |
| 202 | 108.93 | humidity | 90.0 | 270 | < th | dose independent | rect. | 7 | 8 |
| 210 | 109.00 | radiation | 40.0 | 90 | < th | dose independent | rect. | 5 | 18 |
| 222 | 109.10 | radiation | 40.0 | 90 | < th | dose independent | rect. | 5 | 14 |
| 228 | 109.16 | wind | 1.0 | 90 | > th | dose independent | rect. | 5 | 3 |
| 231 | 109.18 | wind | 9.0 | 90 | < th | dose independent | rect. | 5 | 3 |
| 232 | 109.18 | temperature | 10.0 | 90 | > th | dose independent | rect. | 5 | 3 |
| 234 | 109.18 | temperature | 30.0 | 90 | < th | dose independent | rect. | 5 | 3 |
| 235 | 109.18 | humidity | 50.0 | 90 | > th | dose independent | rect. | 5 | 3 |
| 237 | 109.18 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 5 | 3 |
| 240 | 109.18 | temperature | 10.0 | 90 | > th | dose independent | rect. | 8 | 21 |
| 249 | 109.20 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 24 | 15 |
| 251 | 109.22 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 5 | 3 |
| 252 | 109.22 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 5 | 3 |
| 254 | 109.22 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 5 | 18 |
| 259 | 109.25 | humidity | 90.0 | 90 | < th | dose dependent | rect. | 8 | 9 |
| 263 | 109.28 | radiation | 40.0 | 90 | < th | dose independent | rect. | 5 | 3 |
| 266 | 109.29 | humidity | 70.0 | 90 | > th | dose independent | sin | 2 | NA |
| 276 | 109.36 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 5 | 6 |
| 277 | 109.37 | humidity | 60.0 | 10 | > th | dose dependent | sin | 23 | NA |
| 289 | 109.46 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 15 | 22 |
| 310 | 109.55 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 21 | 23 |
| 324 | 109.64 | humidity | 80.0 | 270 | < th | dose independent | rect. | 8 | 4 |
| 330 | 109.67 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 5 | 4 |
| 332 | 109.67 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 5 | 23 |
| 340 | 109.71 | wind | 1.0 | 43200 | < th | dose dependent | no | NA | NA |
| 354 | 109.77 | radiation | 10.0 | 270 | < th | dose independent | rect. | 3 | 11 |
| 398 | 109.94 | radiation | 40.0 | 270 | < th | dose independent | rect. | 10 | 22 |
| 406 | 109.97 | humidity | 90.0 | 90 | < th | dose dependent | sin | 1 | NA |
| 407 | 109.98 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 24 | 23 |
| 426 | 110.05 | radiation | 10.0 | 270 | > th | dose independent | rect. | 16 | 22 |
| 428 | 110.05 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 11 | 23 |
| 432 | 110.06 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 9 | 23 |
| 438 | 110.09 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 7 | 23 |
| 471 | 110.20 | radiation | 30.0 | 90 | < th | dose independent | rect. | 5 | 6 |
| 478 | 110.24 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 8 | 13 |
| 480 | 110.25 | humidity | 50.0 | 270 | > th | dose independent | rect. | 15 | 16 |
| 483 | 110.26 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 8 | 13 |
| 495 | 110.30 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 3 | 23 |
| 496 | 110.31 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 8 | 10 |
| 500 | 110.32 | wind | 1.0 | 43200 | > th | dose independent | rect. | 17 | 19 |
| 507 | 110.35 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 3 | 5 |
| 517 | 110.39 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 8 | 4 |
| 531 | 110.45 | temperature | 30.0 | 270 | < th | dose independent | rect. | 15 | 16 |
| 533 | 110.45 | humidity | 90.0 | 270 | < th | dose dependent | rect. | 8 | 4 |
| 583 | 110.63 | wind | 1.0 | 43200 | < th | dose independent | rect. | 17 | 20 |
| 619 | 110.77 | wind | 9.0 | 90 | < th | dose dependent | rect. | 5 | 3 |
| 624 | 110.78 | humidity | 70.0 | 90 | < th | dose independent | sin | 2 | NA |
| 628 | 110.79 | wind | 1.0 | 43200 | < th | dose independent | rect. | 19 | 18 |
| 646 | 110.83 | temperature | 30.0 | 90 | < th | dose independent | rect. | 17 | 15 |
| 651 | 110.83 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 19 | 19 |
| 671 | 110.89 | temperature | 30.0 | 270 | < th | dose independent | rect. | 13 | 19 |
| 683 | 110.93 | radiation | 40.0 | 270 | < th | dose dependent | sin | 5 | NA |
| 685 | 110.94 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 21 | 17 |
| 686 | 110.94 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 11 | 21 |
| 706 | 110.98 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 8 | 18 |
| 717 | 111.01 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 8 | 21 |
| 727 | 111.03 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 13 | 19 |
| 734 | 111.04 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 8 | 21 |
| 770 | 111.12 | humidity | 60.0 | 90 | > th | dose independent | rect. | 17 | 15 |
| 790 | 111.15 | radiation | 20.0 | 90 | < th | dose independent | rect. | 5 | 18 |
| 795 | 111.16 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 15 | 17 |
| 811 | 111.20 | temperature | 30.0 | 90 | < th | dose dependent | sin | 1 | NA |
| 838 | 111.27 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 3 | 4 |
| 874 | 111.34 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 5 | 3 |
| 880 | 111.35 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 5 | 19 |
| 884 | 111.37 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 5 | 8 |
| 914 | 111.44 | radiation | 40.0 | 10 | < th | dose independent | rect. | 5 | 15 |
| 922 | 111.46 | temperature | 30.0 | 90 | < th | dose independent | rect. | 5 | 18 |
| 925 | 111.46 | temperature | 10.0 | 90 | > th | dose dependent | sin | 2 | NA |
| 958 | 111.52 | radiation | 40.0 | 10 | < th | dose independent | rect. | 5 | 19 |
| 961 | 111.53 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 22 |
| 965 | 111.53 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 22 |
| 969 | 111.55 | wind | 7.0 | 270 | < th | dose independent | rect. | 3 | 4 |
| 988 | 111.58 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 5 | 3 |
| 991 | 111.59 | radiation | 1.0 | 90 | > th | dose dependent | rect. | 8 | 11 |