Os03g0348800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Lipase, class 3 family protein.
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Os03g0348800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Lipase, class 3 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 44.28 | 0.313 | 10.1 | 0.859 | 1.04 | -0.467 | -0.624 | 2.72 | 0.476 | 23.7 | 18.7 | 2527 | -- | -- |
| 49.66 | 0.328 | 10.2 | 0.393 | 1.03 | -0.617 | -0.452 | -- | 0.405 | 23.7 | 13.62 | 18466 | -- | -- |
| 45.73 | 0.315 | 10.1 | 0.858 | 1.02 | -0.428 | -- | 2.55 | 0.464 | 23.7 | 18.47 | 2893 | -- | -- |
| 50.25 | 0.33 | 10.2 | 0.403 | 1.01 | -0.619 | -- | -- | 0.421 | 23.7 | 12.26 | 14165 | -- | -- |
| 87.5 | 0.438 | 10.1 | 0.58 | -- | -1.22 | -- | 2.43 | 0.468 | -- | 17.16 | 4590 | -- | -- |
| 54.95 | 0.348 | 10.2 | -0.0745 | 0.995 | -- | -0.443 | -- | 0.174 | 23.6 | -- | -- | -- | -- |
| 55.8 | 0.35 | 10.2 | -0.0567 | 0.997 | -- | -- | -- | 0.176 | 23.7 | -- | -- | -- | -- |
| 93.41 | 0.452 | 10.2 | 0.211 | -- | -1.31 | -- | -- | 0.362 | -- | 11.14 | 16052 | -- | -- |
| 51.13 | 0.333 | 10.2 | -- | 1.02 | -0.433 | -- | -- | 0.293 | 23.7 | 10.86 | 9801 | -- | -- |
| 118.29 | 0.508 | 10.2 | -0.0285 | -- | -- | -- | -- | 0.188 | -- | -- | -- | -- | -- |
| 55.89 | 0.35 | 10.2 | -- | 0.996 | -- | -- | -- | 0.182 | 23.7 | -- | -- | -- | -- |
| 94.51 | 0.454 | 10.2 | -- | -- | -1.25 | -- | -- | 0.332 | -- | 11.14 | 16052 | -- | -- |
| 118.31 | 0.508 | 10.2 | -- | -- | -- | -- | -- | 0.191 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 38.31 | humidity | 80 | 43200 | > th | dose independent | rect. | 20 | 11 |
| 8 | 38.59 | humidity | 80 | 43200 | < th | dose dependent | rect. | 20 | 9 |
| 9 | 38.60 | humidity | 90 | 43200 | < th | dose dependent | rect. | 4 | 1 |
| 15 | 38.69 | humidity | 80 | 43200 | < th | dose independent | rect. | 20 | 8 |
| 24 | 38.79 | humidity | 80 | 43200 | < th | dose dependent | rect. | 23 | 1 |
| 25 | 38.79 | radiation | 10 | 43200 | < th | dose dependent | rect. | 9 | 1 |
| 30 | 38.83 | humidity | 80 | 43200 | < th | dose dependent | rect. | 23 | 3 |
| 41 | 38.94 | humidity | 80 | 43200 | < th | dose dependent | rect. | 23 | 6 |
| 52 | 39.00 | wind | 3 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 59 | 39.02 | wind | 3 | 43200 | < th | dose independent | rect. | 5 | 12 |
| 60 | 39.02 | wind | 3 | 43200 | > th | dose independent | rect. | 5 | 13 |
| 63 | 39.03 | wind | 3 | 43200 | > th | dose independent | rect. | 4 | 17 |
| 64 | 39.03 | wind | 3 | 43200 | > th | dose independent | rect. | 1 | 20 |
| 74 | 39.07 | wind | 3 | 43200 | > th | dose independent | rect. | 4 | 15 |
| 91 | 39.12 | humidity | 80 | 43200 | < th | dose independent | rect. | 23 | 10 |
| 92 | 39.12 | wind | 3 | 43200 | < th | dose independent | rect. | 4 | 17 |
| 105 | 39.15 | wind | 3 | 43200 | < th | dose independent | rect. | 2 | 19 |
| 117 | 39.18 | wind | 1 | 43200 | < th | dose dependent | rect. | 8 | 4 |
| 127 | 39.22 | wind | 3 | 43200 | > th | dose independent | sin | 0 | NA |
| 128 | 39.22 | wind | 3 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 140 | 39.25 | wind | 3 | 43200 | > th | dose independent | rect. | 11 | 21 |
| 141 | 39.26 | humidity | 80 | 43200 | > th | dose independent | sin | 10 | NA |
| 142 | 39.26 | humidity | 80 | 43200 | < th | dose independent | sin | 10 | NA |
| 153 | 39.29 | wind | 3 | 43200 | < th | dose independent | sin | 0 | NA |
| 197 | 39.37 | humidity | 80 | 43200 | < th | dose independent | rect. | 23 | 1 |
| 199 | 39.37 | wind | 3 | 43200 | > th | dose independent | rect. | 9 | 23 |
| 209 | 39.39 | wind | 3 | 43200 | > th | dose independent | rect. | 5 | 22 |
| 219 | 39.40 | wind | 3 | 43200 | < th | dose dependent | rect. | 6 | 9 |
| 250 | 39.46 | radiation | 10 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 252 | 39.46 | wind | 3 | 43200 | < th | dose independent | rect. | 11 | 23 |
| 261 | 39.48 | wind | 3 | 43200 | < th | dose independent | rect. | 11 | 21 |
| 263 | 39.49 | humidity | 90 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 275 | 39.50 | wind | 3 | 43200 | > th | dose independent | no | NA | NA |
| 281 | 39.51 | wind | 3 | 43200 | < th | dose independent | rect. | 9 | 23 |
| 286 | 39.52 | radiation | 10 | 43200 | > th | dose independent | rect. | 9 | 4 |
| 294 | 39.52 | wind | 3 | 43200 | > th | dose independent | rect. | 20 | 23 |
| 295 | 39.52 | wind | 3 | 43200 | < th | dose independent | rect. | 4 | 23 |
| 338 | 39.60 | wind | 3 | 43200 | > th | dose independent | rect. | 18 | 23 |
| 341 | 39.60 | wind | 5 | 43200 | < th | dose dependent | rect. | 5 | 14 |
| 342 | 39.61 | wind | 3 | 43200 | < th | dose independent | no | NA | NA |
| 347 | 39.61 | wind | 3 | 43200 | < th | dose independent | rect. | 20 | 23 |
| 370 | 39.65 | wind | 3 | 43200 | < th | dose independent | rect. | 18 | 23 |
| 387 | 39.70 | humidity | 80 | 43200 | > th | dose independent | rect. | 24 | 1 |
| 430 | 39.76 | wind | 5 | 43200 | < th | dose dependent | rect. | 5 | 21 |
| 444 | 39.79 | wind | 5 | 43200 | < th | dose dependent | rect. | 11 | 21 |
| 479 | 39.86 | radiation | 1 | 43200 | > th | dose independent | rect. | 4 | 3 |
| 496 | 39.87 | humidity | 80 | 43200 | > th | dose independent | rect. | 4 | 2 |
| 506 | 39.88 | radiation | 1 | 43200 | < th | dose independent | rect. | 4 | 3 |
| 538 | 39.92 | humidity | 80 | 43200 | > th | dose independent | rect. | 24 | 6 |
| 565 | 39.96 | radiation | 1 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 566 | 39.96 | radiation | 1 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 569 | 39.96 | wind | 5 | 43200 | < th | dose dependent | sin | 0 | NA |
| 593 | 39.99 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 2 | 1 |
| 607 | 40.00 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 2 | 2 |
| 624 | 40.01 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 1 | 4 |
| 653 | 40.06 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 1 | 3 |
| 657 | 40.06 | wind | 5 | 43200 | < th | dose dependent | rect. | 1 | 20 |
| 675 | 40.08 | wind | 5 | 43200 | < th | dose dependent | rect. | 23 | 22 |
| 689 | 40.11 | humidity | 80 | 43200 | < th | dose independent | rect. | 3 | 1 |
| 723 | 40.14 | wind | 1 | 43200 | > th | dose dependent | rect. | 13 | 19 |
| 751 | 40.17 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 4 | 1 |
| 764 | 40.18 | wind | 5 | 43200 | < th | dose dependent | no | NA | NA |
| 786 | 40.20 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 1 | 11 |
| 792 | 40.20 | wind | 1 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 840 | 40.25 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 8 | 4 |
| 843 | 40.25 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 1 | 11 |
| 857 | 40.27 | wind | 3 | 43200 | > th | dose independent | sin | 14 | NA |
| 868 | 40.28 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 8 | 4 |
| 943 | 40.34 | wind | 3 | 43200 | < th | dose dependent | rect. | 19 | 21 |
| 944 | 40.35 | humidity | 90 | 14400 | < th | dose independent | rect. | 21 | 1 |