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Os03g0343700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Brix domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.5 (0.022) R2 : 0.43
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.986 (0.0568) R2dC : 0.378 R2C : 0.371
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.279 (0.0463) R2dN8 : 0.0585 R2N8 : 0.0518
σ : 0.415
deviance : 78.62
__
_____
C
peak time of C : 16.5
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
62.77 0.372 10.6 0.165 0.822 0.748 1.43 1.13 -0.303 17.6 13.45 114 -- --
64.36 0.374 10.5 0.176 0.834 0.627 1.61 -- -0.3 17.2 13.86 127 -- --
67.28 0.382 10.5 0.146 0.775 0.781 -- 1.35 -0.297 17.8 10.16 151 -- --
70.42 0.391 10.5 0.164 0.711 0.712 -- -- -0.308 17.9 5.259 212 -- --
76.62 0.408 10.5 0.121 -- 1.16 -- 1.36 -0.341 -- -0.006498 441 -- --
70.68 0.394 10.5 0.167 0.978 -- 1.62 -- -0.267 16.5 -- -- -- --
77.78 0.413 10.5 0.179 0.989 -- -- -- -0.259 16.5 -- -- -- --
79.79 0.416 10.5 0.102 -- 1.21 -- -- -0.378 -- -15.21 461 -- --
71.05 0.393 10.6 -- 0.726 0.687 -- -- -0.326 17.8 7.162 217 -- --
130.05 0.533 10.5 0.14 -- -- -- -- -0.285 -- -- -- -- --
78.62 0.415 10.5 -- 0.986 -- -- -- -0.279 16.5 -- -- -- --
80.06 0.417 10.6 -- -- 1.21 -- -- -0.389 -- -16.13 461 -- --
130.57 0.533 10.5 -- -- -- -- -- -0.3 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 55.11 radiation 40.0 10 < th dose dependent rect. 6 3
3 55.49 radiation 20.0 30 < th dose independent rect. 6 3
5 55.71 temperature 25.0 10 > th dose independent rect. 1 8
6 55.71 humidity 50.0 10 > th dose dependent rect. 6 3
8 55.81 wind 9.0 10 < th dose dependent rect. 6 3
13 55.93 wind 9.0 10 < th dose independent rect. 9 21
16 56.06 radiation 40.0 10 < th dose independent rect. 6 3
20 56.12 temperature 25.0 10 > th dose independent rect. 4 5
23 56.16 wind 7.0 10 < th dose independent rect. 6 3
25 56.16 temperature 10.0 10 > th dose independent rect. 6 3
27 56.16 temperature 30.0 10 < th dose independent rect. 6 3
28 56.16 humidity 50.0 10 > th dose independent rect. 6 3
30 56.16 atmosphere 995.0 10 > th dose independent rect. 6 3
31 56.16 atmosphere 1015.0 10 < th dose independent rect. 6 3
32 56.16 temperature 10.0 10 > th dose independent rect. 9 21
39 56.25 precipitation 0.1 10 < th dose independent rect. 6 3
40 56.25 precipitation 0.1 10 < th dose dependent rect. 6 3
55 56.35 precipitation 0.1 30 < th dose independent rect. 9 21
56 56.35 precipitation 0.1 30 < th dose dependent rect. 9 21
66 56.44 temperature 10.0 1440 > th dose independent rect. 7 3
69 56.44 atmosphere 995.0 1440 > th dose independent rect. 7 3
70 56.44 atmosphere 1015.0 1440 < th dose independent rect. 7 3
71 56.44 temperature 10.0 1440 > th dose independent rect. 10 21
75 56.50 atmosphere 995.0 10 > th dose independent rect. 9 21
77 56.53 temperature 10.0 10 > th dose dependent rect. 6 3
103 56.68 temperature 10.0 90 > th dose dependent rect. 6 2
107 56.70 wind 1.0 10 > th dose independent rect. 6 3
140 56.83 wind 9.0 1440 < th dose independent rect. 7 2
145 56.83 humidity 50.0 1440 > th dose independent rect. 7 2
199 57.13 temperature 25.0 10 > th dose independent rect. 23 10
207 57.20 humidity 90.0 10 < th dose independent rect. 4 5
210 57.21 radiation 1.0 10 > th dose independent rect. 6 3
219 57.26 atmosphere 1015.0 90 < th dose dependent rect. 6 1
234 57.34 radiation 40.0 10 < th dose dependent rect. 6 8
237 57.36 temperature 25.0 30 < th dose independent rect. 22 8
260 57.58 atmosphere 995.0 10 > th dose dependent rect. 6 3
289 57.81 radiation 40.0 10 < th dose dependent rect. 6 10
295 57.85 radiation 40.0 10 < th dose independent rect. 6 16
300 57.87 temperature 30.0 10 < th dose dependent rect. 22 8
308 57.94 humidity 50.0 30 > th dose independent rect. 9 21
322 58.13 temperature 30.0 90 < th dose dependent rect. 6 1
344 58.31 radiation 40.0 90 < th dose independent rect. 6 17
363 58.46 atmosphere 1015.0 30 < th dose dependent rect. 6 3
370 58.53 wind 1.0 90 > th dose dependent rect. 6 1
372 58.53 temperature 20.0 10 > th dose dependent rect. 21 12
373 58.53 atmosphere 995.0 30 > th dose dependent rect. 9 21
376 58.55 wind 1.0 270 > th dose independent rect. 4 3
377 58.56 humidity 60.0 10 > th dose dependent rect. 6 8
378 58.58 temperature 25.0 10 > th dose independent rect. 21 12
380 58.59 radiation 40.0 10 < th dose dependent rect. 6 18
383 58.61 radiation 40.0 90 < th dose dependent rect. 6 17
389 58.63 radiation 40.0 10 < th dose dependent rect. 6 16
391 58.64 wind 1.0 270 > th dose independent rect. 4 1
399 58.70 radiation 20.0 90 < th dose independent rect. 6 17
400 58.73 humidity 90.0 90 < th dose independent rect. 6 1
432 58.94 humidity 90.0 10 < th dose independent rect. 6 3
465 59.18 radiation 40.0 10 < th dose independent rect. 6 14
511 59.37 temperature 20.0 10 > th dose dependent rect. 23 10
520 59.40 atmosphere 1015.0 10 < th dose independent rect. 9 21
524 59.42 temperature 30.0 10 < th dose dependent rect. 20 10
573 59.71 wind 1.0 10 > th dose independent rect. 4 5
579 59.73 humidity 70.0 30 > th dose independent rect. 6 12
581 59.74 radiation 1.0 90 > th dose dependent rect. 6 1
583 59.75 humidity 70.0 30 > th dose independent rect. 6 8
625 59.95 temperature 25.0 10 > th dose independent rect. 19 14
634 59.98 temperature 30.0 30 < th dose dependent rect. 6 3
653 60.10 temperature 25.0 30 < th dose independent sin 8 NA
685 60.24 radiation 40.0 10 < th dose independent rect. 6 8
702 60.33 atmosphere 1000.0 10 > th dose independent rect. 22 8
709 60.37 radiation 1.0 90 > th dose independent rect. 18 14
712 60.39 radiation 10.0 270 < th dose independent rect. 4 4
716 60.39 humidity 70.0 30 > th dose independent rect. 6 16
722 60.41 humidity 50.0 10 > th dose dependent rect. 22 8
725 60.43 radiation 40.0 270 < th dose dependent rect. 4 13
740 60.48 radiation 20.0 270 < th dose dependent rect. 4 5
755 60.52 atmosphere 1005.0 270 > th dose dependent rect. 4 1
788 60.66 wind 9.0 10 < th dose independent rect. 22 8
789 60.66 temperature 10.0 10 > th dose independent rect. 22 8
791 60.66 humidity 50.0 10 > th dose independent rect. 22 8
795 60.66 radiation 20.0 10 < th dose independent rect. 22 8
799 60.66 temperature 10.0 10 > th dose independent rect. 6 16
801 60.66 atmosphere 1015.0 10 < th dose independent rect. 6 16
809 60.68 temperature 25.0 10 > th dose independent sin 8 NA
821 60.72 humidity 70.0 30 > th dose independent rect. 6 14
828 60.75 radiation 20.0 270 < th dose dependent rect. 4 9
861 60.82 precipitation 0.1 10 < th dose independent rect. 6 16
865 60.82 precipitation 0.1 10 < th dose dependent rect. 6 16
873 60.85 precipitation 0.1 30 < th dose independent rect. 22 8
876 60.85 precipitation 0.1 30 < th dose dependent rect. 22 8
888 60.88 temperature 10.0 1440 > th dose independent rect. 23 8
891 60.88 temperature 30.0 1440 < th dose independent rect. 23 8
895 60.88 humidity 50.0 1440 > th dose independent rect. 23 8
900 60.88 atmosphere 995.0 1440 > th dose independent rect. 23 8
901 60.88 radiation 40.0 1440 < th dose independent rect. 23 8
905 60.88 temperature 10.0 1440 > th dose independent rect. 7 16
929 60.93 radiation 40.0 270 < th dose dependent rect. 3 8
972 61.05 temperature 30.0 10 < th dose independent rect. 6 16
986 61.07 temperature 30.0 10 < th dose dependent rect. 18 12
988 61.08 radiation 20.0 270 < th dose independent rect. 3 7
997 61.09 humidity 50.0 10 > th dose dependent rect. 6 16