Os03g0342800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0342800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 221.96 | 0.7 | 7.04 | 0.425 | 1.21 | -1.17 | 0.823 | -2.28 | -0.796 | 16 | 21.6 | 1646 | -- | -- |
| 233.34 | 0.711 | 6.98 | 0.992 | 1.2 | -1 | 0.796 | -- | -0.694 | 16 | 21.8 | 1741 | -- | -- |
| 223.73 | 0.697 | 7.04 | 0.427 | 1.21 | -1.17 | -- | -2.3 | -0.793 | 16 | 21.56 | 1566 | -- | -- |
| 234.61 | 0.713 | 6.96 | 1.04 | 1.2 | -1.01 | -- | -- | -0.639 | 16 | 21.8 | 1627 | -- | -- |
| 299.18 | 0.806 | 7.04 | 0.454 | -- | -1.23 | -- | -2.26 | -0.778 | -- | 21.8 | 2563 | -- | -- |
| 265.52 | 0.764 | 7.03 | 0.598 | 1.21 | -- | 0.679 | -- | -0.957 | 16 | -- | -- | -- | -- |
| 266.85 | 0.765 | 7.03 | 0.606 | 1.21 | -- | -- | -- | -0.954 | 16 | -- | -- | -- | -- |
| 309.86 | 0.82 | 6.94 | 1.11 | -- | -1.11 | -- | -- | -0.621 | -- | 21.7 | 2555 | -- | -- |
| 257.14 | 0.747 | 7 | -- | 1.17 | -0.698 | -- | -- | -0.818 | 16 | 22.2 | 1495 | -- | -- |
| 347.13 | 0.871 | 7.03 | 0.557 | -- | -- | -- | -- | -0.986 | -- | -- | -- | -- | -- |
| 276.54 | 0.778 | 7.05 | -- | 1.2 | -- | -- | -- | -1.02 | 16 | -- | -- | -- | -- |
| 327.03 | 0.842 | 6.99 | -- | -- | -0.786 | -- | -- | -0.805 | -- | 22.39 | 1143 | -- | -- |
| 355.32 | 0.88 | 7.04 | -- | -- | -- | -- | -- | -1.05 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 212.16 | wind | 3.0 | 14400 | < th | dose independent | rect. | 5 | 2 |
| 2 | 212.58 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 5 | 2 |
| 4 | 212.96 | wind | 3.0 | 14400 | > th | dose independent | rect. | 5 | 2 |
| 6 | 213.01 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 10 | 214.30 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 20 | 12 |
| 15 | 214.60 | wind | 3.0 | 14400 | > th | dose independent | rect. | 5 | 4 |
| 18 | 214.78 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 21 | 214.86 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 23 | 3 |
| 42 | 215.88 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 1 | 1 |
| 52 | 216.19 | wind | 3.0 | 14400 | < th | dose independent | rect. | 1 | 1 |
| 54 | 216.31 | wind | 3.0 | 14400 | < th | dose dependent | sin | 8 | NA |
| 59 | 216.48 | wind | 3.0 | 14400 | < th | dose independent | rect. | 22 | 10 |
| 82 | 217.04 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 1 | 8 |
| 88 | 217.11 | wind | 3.0 | 14400 | > th | dose independent | rect. | 22 | 11 |
| 102 | 217.42 | wind | 3.0 | 14400 | < th | dose independent | rect. | 1 | 8 |
| 103 | 217.42 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 5 | 2 |
| 121 | 217.81 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 4 | 7 |
| 123 | 217.86 | wind | 3.0 | 14400 | > th | dose independent | rect. | 1 | 8 |
| 135 | 218.08 | wind | 3.0 | 14400 | > th | dose independent | rect. | 1 | 1 |
| 206 | 219.05 | wind | 3.0 | 14400 | < th | dose independent | sin | 8 | NA |
| 218 | 219.20 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 22 | 10 |
| 280 | 219.90 | wind | 3.0 | 14400 | > th | dose independent | sin | 8 | NA |
| 442 | 221.69 | wind | 3.0 | 14400 | < th | dose independent | rect. | 23 | 4 |
| 508 | 222.39 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 1 | 7 |
| 530 | 222.62 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 531 | 222.62 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 532 | 222.62 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 580 | 222.95 | wind | 3.0 | 14400 | > th | dose independent | rect. | 23 | 4 |
| 597 | 223.07 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 23 | 3 |
| 642 | 223.43 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 644 | 223.44 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 645 | 223.44 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 1 |
| 659 | 223.54 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 2 | 1 |
| 891 | 224.87 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 3 | 3 |
| 926 | 225.03 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 4 | 19 |