Os03g0341200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0341200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 34.86 | 0.277 | 9.45 | 0.829 | 0.431 | -0.649 | -0.249 | -0.367 | 0.364 | 16.6 | 26 | 125 | -- | -- |
| 35.07 | 0.276 | 9.45 | 0.789 | 0.448 | -0.613 | -0.154 | -- | 0.362 | 16.4 | 25.89 | 133 | -- | -- |
| 35 | 0.276 | 9.45 | 0.814 | 0.439 | -0.634 | -- | -0.248 | 0.362 | 16.5 | 25.9 | 124 | -- | -- |
| 35.08 | 0.276 | 9.46 | 0.772 | 0.44 | -0.618 | -- | -- | 0.353 | 16.5 | 25.9 | 124 | -- | -- |
| 42.53 | 0.304 | 9.45 | 0.727 | -- | -1.03 | -- | -0.172 | 0.341 | -- | 35.2 | 109 | -- | -- |
| 40.54 | 0.299 | 9.43 | 0.926 | 0.564 | -- | -0.0687 | -- | 0.485 | 16.1 | -- | -- | -- | -- |
| 40.56 | 0.298 | 9.43 | 0.925 | 0.563 | -- | -- | -- | 0.484 | 16.1 | -- | -- | -- | -- |
| 42.55 | 0.304 | 9.45 | 0.704 | -- | -1.03 | -- | -- | 0.333 | -- | 90.46 | 109 | -- | -- |
| 49.18 | 0.327 | 9.49 | -- | 0.366 | -0.913 | -- | -- | 0.201 | 16.8 | 26.14 | 119 | -- | -- |
| 57.8 | 0.355 | 9.42 | 0.902 | -- | -- | -- | -- | 0.469 | -- | -- | -- | -- | -- |
| 63.11 | 0.372 | 9.45 | -- | 0.545 | -- | -- | -- | 0.381 | 16.1 | -- | -- | -- | -- |
| 53.14 | 0.34 | 9.49 | -- | -- | -1.13 | -- | -- | 0.17 | -- | 28.25 | 135 | -- | -- |
| 79.27 | 0.416 | 9.45 | -- | -- | -- | -- | -- | 0.369 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 32.75 | temperature | 10 | 90 | > th | dose dependent | sin | 7 | NA |
| 5 | 32.90 | temperature | 15 | 270 | > th | dose dependent | rect. | 20 | 14 |
| 6 | 32.99 | temperature | 30 | 90 | < th | dose dependent | sin | 7 | NA |
| 29 | 33.51 | humidity | 80 | 1440 | < th | dose dependent | rect. | 21 | 8 |
| 55 | 33.85 | temperature | 25 | 90 | < th | dose dependent | rect. | 2 | 11 |
| 58 | 33.87 | temperature | 25 | 90 | < th | dose dependent | rect. | 1 | 22 |
| 66 | 33.92 | temperature | 20 | 270 | > th | dose independent | rect. | 21 | 15 |
| 87 | 34.05 | temperature | 15 | 10 | > th | dose dependent | rect. | 22 | 14 |
| 171 | 34.51 | temperature | 20 | 10 | > th | dose dependent | rect. | 21 | 17 |
| 185 | 34.55 | temperature | 30 | 270 | < th | dose dependent | rect. | 23 | 10 |
| 224 | 34.70 | temperature | 25 | 90 | < th | dose independent | sin | 7 | NA |
| 283 | 34.89 | temperature | 25 | 90 | > th | dose independent | sin | 7 | NA |
| 288 | 34.90 | temperature | 20 | 10 | > th | dose independent | rect. | 21 | 15 |
| 432 | 35.14 | temperature | 25 | 90 | < th | dose independent | rect. | 13 | 22 |
| 469 | 35.20 | temperature | 25 | 270 | < th | dose independent | rect. | 11 | 21 |
| 477 | 35.20 | temperature | 30 | 270 | < th | dose dependent | rect. | 11 | 20 |
| 485 | 35.21 | temperature | 15 | 90 | > th | dose dependent | rect. | 6 | 21 |
| 486 | 35.21 | temperature | 25 | 90 | < th | dose dependent | rect. | 20 | 23 |
| 496 | 35.23 | temperature | 25 | 10 | < th | dose dependent | rect. | 24 | 22 |
| 507 | 35.25 | temperature | 20 | 270 | > th | dose independent | rect. | 4 | 22 |
| 511 | 35.25 | temperature | 15 | 10 | > th | dose dependent | rect. | 6 | 21 |
| 523 | 35.26 | temperature | 15 | 10 | > th | dose dependent | rect. | 6 | 23 |
| 576 | 35.31 | temperature | 25 | 90 | < th | dose dependent | rect. | 20 | 17 |
| 582 | 35.31 | temperature | 25 | 90 | < th | dose dependent | rect. | 16 | 23 |
| 585 | 35.32 | temperature | 20 | 90 | < th | dose independent | rect. | 1 | 12 |
| 590 | 35.32 | temperature | 25 | 90 | < th | dose dependent | rect. | 16 | 21 |
| 609 | 35.34 | temperature | 20 | 10 | > th | dose independent | rect. | 21 | 17 |
| 647 | 35.37 | temperature | 25 | 90 | < th | dose independent | rect. | 15 | 18 |
| 651 | 35.37 | temperature | 25 | 90 | < th | dose dependent | no | NA | NA |
| 659 | 35.37 | temperature | 30 | 90 | < th | dose dependent | rect. | 13 | 22 |
| 678 | 35.38 | temperature | 25 | 90 | < th | dose dependent | rect. | 9 | 23 |
| 697 | 35.40 | temperature | 30 | 90 | < th | dose dependent | rect. | 16 | 16 |
| 699 | 35.40 | temperature | 30 | 90 | < th | dose dependent | rect. | 15 | 18 |
| 793 | 35.49 | temperature | 25 | 270 | < th | dose independent | rect. | 23 | 9 |
| 826 | 35.51 | temperature | 20 | 270 | < th | dose independent | rect. | 23 | 13 |
| 858 | 35.54 | temperature | 20 | 10 | < th | dose independent | rect. | 2 | 11 |
| 891 | 35.56 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 6 |
| 905 | 35.57 | wind | 1 | 1440 | > th | dose dependent | rect. | 7 | 3 |
| 934 | 35.60 | wind | 9 | 1440 | < th | dose dependent | rect. | 7 | 3 |
| 945 | 35.60 | temperature | 30 | 10 | < th | dose dependent | rect. | 3 | 23 |