Os03g0341000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to AP2 domain containing protein RAP2.2 (Fragment).
FiT-DB / Search/ Help/ Sample detail
|
Os03g0341000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to AP2 domain containing protein RAP2.2 (Fragment).
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 344.2 | 0.872 | 4.07 | -0.0093 | 1.23 | -2.55 | -3.31 | 9.47 | -0.456 | 6.7 | 26.59 | 5811 | -- | -- |
| 340.73 | 0.86 | 4.13 | -0.381 | 1.23 | -2.83 | -3.31 | -- | 0.134 | 6.42 | 16.69 | 30477 | -- | -- |
| 370.48 | 0.896 | 4.09 | -0.18 | 1.25 | -2.53 | -- | 9.02 | -0.482 | 6.2 | 26.65 | 5808 | -- | -- |
| 363.74 | 0.888 | 4.13 | -0.434 | 1.21 | -2.86 | -- | -- | 0.16 | 5.96 | 16.8 | 30406 | -- | -- |
| 436.87 | 0.973 | 4.08 | -0.106 | -- | -2.46 | -- | 8.76 | -0.276 | -- | 26.3 | 6246 | -- | -- |
| 479.74 | 1.03 | 4.42 | -3.18 | 1.19 | -- | -3.21 | -- | -1.16 | 6.56 | -- | -- | -- | -- |
| 504.69 | 1.05 | 4.42 | -3.23 | 1.19 | -- | -- | -- | -1.15 | 6.19 | -- | -- | -- | -- |
| 438.13 | 0.975 | 4.15 | -0.398 | -- | -2.85 | -- | -- | 0.187 | -- | 16.64 | 30796 | -- | -- |
| 366.15 | 0.891 | 4.11 | -- | 1.22 | -2.97 | -- | -- | 0.26 | 5.92 | 15.96 | 31758 | -- | -- |
| 577.58 | 1.12 | 4.44 | -3.2 | -- | -- | -- | -- | -1.13 | -- | -- | -- | -- | -- |
| 780.42 | 1.31 | 4.34 | -- | 1.14 | -- | -- | -- | -0.792 | 6.33 | -- | -- | -- | -- |
| 439.52 | 0.976 | 4.12 | -- | -- | -3.11 | -- | -- | 0.289 | -- | 16.02 | 30813 | -- | -- |
| 847.96 | 1.36 | 4.36 | -- | -- | -- | -- | -- | -0.771 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 331.07 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 2 | 331.23 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 11 | 332.13 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 12 | 332.13 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 9 | 1 |
| 13 | 332.14 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 3 | 1 |
| 23 | 332.34 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 2 | 1 |
| 89 | 333.29 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 90 | 333.29 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 9 | 1 |
| 137 | 334.09 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 12 | 4 |
| 154 | 334.31 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 177 | 334.67 | temperature | 20.0 | 43200 | < th | dose independent | sin | 8 | NA |
| 189 | 334.79 | temperature | 20.0 | 43200 | > th | dose independent | sin | 7 | NA |
| 191 | 334.79 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 12 | 4 |
| 229 | 335.21 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 325 | 336.09 | temperature | 20.0 | 43200 | > th | dose dependent | rect. | 2 | 1 |
| 337 | 336.18 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 8 | 4 |
| 339 | 336.20 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 343 | 336.22 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 378 | 336.49 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 12 | 8 |
| 379 | 336.49 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 12 | 12 |
| 389 | 336.51 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 12 | 19 |
| 490 | 336.85 | temperature | 20.0 | 14400 | < th | dose dependent | rect. | 1 | 10 |
| 495 | 336.88 | temperature | 20.0 | 43200 | > th | dose dependent | rect. | 6 | 1 |
| 839 | 338.04 | temperature | 20.0 | 14400 | < th | dose dependent | sin | 6 | NA |
| 872 | 338.18 | temperature | 20.0 | 43200 | > th | dose dependent | sin | 9 | NA |
| 903 | 338.29 | temperature | 20.0 | 14400 | < th | dose dependent | rect. | 3 | 2 |
| 938 | 338.44 | temperature | 20.0 | 43200 | < th | dose independent | no | NA | NA |
| 992 | 338.66 | temperature | 30.0 | 14400 | < th | dose independent | sin | 15 | NA |