Os03g0338200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0338200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 69.79 | 0.393 | 8.12 | 0.216 | 0.715 | -1 | 0.264 | -1.23 | 0.22 | 2.23 | 25.2 | 91 | -- | -- |
| 71.81 | 0.395 | 8.14 | 0.0554 | 0.713 | -0.911 | -0.0698 | -- | 0.189 | 2.2 | 25.3 | 81 | -- | -- |
| 69.95 | 0.39 | 8.12 | 0.178 | 0.709 | -0.988 | -- | -1.05 | 0.215 | 2.26 | 25.14 | 110 | -- | -- |
| 71.74 | 0.394 | 8.14 | 0.0364 | 0.704 | -0.887 | -- | -- | 0.177 | 2.26 | 25.33 | 99 | -- | -- |
| 87.07 | 0.435 | 8.12 | 0.157 | -- | -0.937 | -- | -0.799 | 0.215 | -- | 25.44 | 1060 | -- | -- |
| 83.06 | 0.427 | 8.1 | 0.241 | 0.525 | -- | -0.149 | -- | 0.361 | 2.27 | -- | -- | -- | -- |
| 83.15 | 0.427 | 8.1 | 0.245 | 0.525 | -- | -- | -- | 0.362 | 2.27 | -- | -- | -- | -- |
| 87.77 | 0.436 | 8.14 | 0.0096 | -- | -0.869 | -- | -- | 0.184 | -- | 25.7 | 1051 | -- | -- |
| 71.73 | 0.394 | 8.14 | -- | 0.697 | -0.897 | -- | -- | 0.179 | 2.3 | 25.33 | 109 | -- | -- |
| 99.53 | 0.466 | 8.1 | 0.267 | -- | -- | -- | -- | 0.375 | -- | -- | -- | -- | -- |
| 84.73 | 0.431 | 8.11 | -- | 0.53 | -- | -- | -- | 0.335 | 2.28 | -- | -- | -- | -- |
| 87.77 | 0.436 | 8.14 | -- | -- | -0.875 | -- | -- | 0.181 | -- | 25.7 | 1047 | -- | -- |
| 101.41 | 0.47 | 8.1 | -- | -- | -- | -- | -- | 0.345 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 66.04 | wind | 3.0 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 2 | 66.10 | wind | 3.0 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 3 | 66.17 | wind | 3.0 | 14400 | < th | dose independent | rect. | 20 | 11 |
| 11 | 66.61 | wind | 3.0 | 14400 | < th | dose independent | rect. | 4 | 3 |
| 12 | 66.62 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 2 | 2 |
| 14 | 66.65 | wind | 3.0 | 14400 | > th | dose independent | rect. | 20 | 11 |
| 17 | 66.67 | wind | 3.0 | 14400 | > th | dose independent | rect. | 4 | 3 |
| 41 | 66.97 | wind | 3.0 | 14400 | < th | dose independent | sin | 9 | NA |
| 52 | 67.09 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 20 | 11 |
| 53 | 67.11 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 70 | 67.26 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 93 | 67.37 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 21 | 16 |
| 94 | 67.38 | wind | 9.0 | 14400 | < th | dose independent | rect. | 10 | 3 |
| 98 | 67.40 | wind | 3.0 | 14400 | > th | dose independent | sin | 9 | NA |
| 120 | 67.51 | wind | 3.0 | 14400 | < th | dose dependent | sin | 8 | NA |
| 122 | 67.53 | wind | 9.0 | 14400 | < th | dose independent | rect. | 6 | 7 |
| 133 | 67.59 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 22 | 4 |
| 134 | 67.60 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 163 | 67.70 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 5 | 1 |
| 174 | 67.76 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 3 | 5 |
| 223 | 67.93 | wind | 9.0 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 251 | 68.02 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 254 | 68.04 | wind | 3.0 | 14400 | > th | dose independent | rect. | 22 | 15 |
| 261 | 68.06 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 3 | 10 |
| 398 | 68.52 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 12 | 1 |
| 421 | 68.62 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 10 | 21 |
| 427 | 68.64 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 13 |
| 430 | 68.64 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 13 |
| 437 | 68.66 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 13 |
| 447 | 68.70 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 10 | 3 |
| 465 | 68.75 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 22 | 10 |
| 523 | 68.89 | wind | 9.0 | 14400 | > th | dose independent | rect. | 10 | 3 |
| 593 | 69.04 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 22 | 15 |
| 616 | 69.10 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 1 | 7 |
| 625 | 69.12 | wind | 9.0 | 14400 | > th | dose independent | rect. | 6 | 7 |
| 646 | 69.15 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 22 | 15 |
| 668 | 69.20 | wind | 1.0 | 14400 | > th | dose dependent | sin | 7 | NA |
| 680 | 69.22 | wind | 7.0 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 699 | 69.25 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 6 | 7 |
| 701 | 69.25 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 13 |
| 725 | 69.31 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 1 | 12 |
| 781 | 69.39 | wind | 9.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 783 | 69.39 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 821 | 69.46 | wind | 9.0 | 14400 | < th | dose independent | rect. | 1 | 12 |
| 829 | 69.47 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 23 | 23 |
| 833 | 69.48 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 3 | 10 |
| 878 | 69.56 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 3 | 3 |
| 886 | 69.57 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 3 | 5 |
| 923 | 69.65 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 3 | 10 |
| 930 | 69.66 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 21 | 22 |
| 931 | 69.67 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 3 | 3 |
| 934 | 69.67 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 3 | 3 |
| 935 | 69.67 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 19 | 23 |
| 987 | 69.78 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 3 | 5 |
| 991 | 69.79 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 3 | 3 |
| 997 | 69.80 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 3 | 5 |
| 998 | 69.80 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 3 | 5 |