Os03g0337200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os03g0337200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 82.33 | 0.426 | 8.85 | -1.71 | 1.63 | 0.994 | 0.25 | 0.613 | -0.0332 | 3.51 | 21.5 | 1385 | -- | -- |
| 83.49 | 0.426 | 8.87 | -1.73 | 1.63 | 0.947 | 0.385 | -- | -0.0802 | 3.54 | 21.7 | 1365 | -- | -- |
| 82.34 | 0.423 | 8.85 | -1.66 | 1.63 | 0.936 | -- | 0.665 | -0.0177 | 3.56 | 21.77 | 1349 | -- | -- |
| 83.04 | 0.424 | 8.87 | -1.8 | 1.62 | 0.861 | -- | -- | -0.0771 | 3.53 | 22 | 1352 | -- | -- |
| 223.07 | 0.696 | 8.88 | -1.62 | -- | 1.02 | -- | 0.547 | -0.0538 | -- | 22.26 | 1129 | -- | -- |
| 109.39 | 0.49 | 8.81 | -1.48 | 1.67 | -- | 0.192 | -- | 0.202 | 3.48 | -- | -- | -- | -- |
| 109.51 | 0.49 | 8.81 | -1.48 | 1.68 | -- | -- | -- | 0.201 | 3.49 | -- | -- | -- | -- |
| 211.93 | 0.678 | 8.92 | -1.8 | -- | 1.25 | -- | -- | -0.199 | -- | 24.8 | 1138 | -- | -- |
| 159.58 | 0.588 | 8.81 | -- | 1.62 | 0.407 | -- | -- | 0.25 | 3.55 | 22.5 | 1173 | -- | -- |
| 266.57 | 0.763 | 8.81 | -1.41 | -- | -- | -- | -- | 0.245 | -- | -- | -- | -- | -- |
| 167.6 | 0.606 | 8.77 | -- | 1.65 | -- | -- | -- | 0.366 | 3.5 | -- | -- | -- | -- |
| 292.95 | 0.797 | 8.84 | -- | -- | 0.842 | -- | -- | 0.131 | -- | 24.96 | 1113 | -- | -- |
| 319.32 | 0.834 | 8.78 | -- | -- | -- | -- | -- | 0.402 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 83.54 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 19 |
| 16 | 83.68 | temperature | 30 | 270 | < th | dose dependent | rect. | 20 | 22 |
| 21 | 83.72 | temperature | 25 | 1440 | < th | dose dependent | sin | 11 | NA |
| 26 | 83.73 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 13 |
| 81 | 83.89 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 6 |
| 104 | 83.95 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 3 |
| 124 | 84.00 | temperature | 25 | 1440 | < th | dose dependent | rect. | 23 | 1 |
| 133 | 84.03 | temperature | 25 | 720 | < th | dose dependent | rect. | 4 | 20 |
| 141 | 84.05 | temperature | 25 | 1440 | < th | dose dependent | rect. | 9 | 22 |
| 152 | 84.09 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 166 | 84.13 | temperature | 10 | 1440 | > th | dose dependent | rect. | 23 | 1 |
| 176 | 84.15 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 23 |
| 186 | 84.17 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 23 |
| 187 | 84.17 | temperature | 25 | 1440 | < th | dose dependent | rect. | 23 | 23 |
| 189 | 84.18 | temperature | 25 | 1440 | < th | dose dependent | rect. | 5 | 23 |
| 209 | 84.22 | temperature | 10 | 1440 | > th | dose dependent | rect. | 23 | 3 |
| 218 | 84.23 | temperature | 10 | 1440 | > th | dose dependent | rect. | 23 | 7 |
| 272 | 84.38 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 315 | 84.53 | temperature | 10 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 331 | 84.57 | temperature | 10 | 1440 | > th | dose dependent | rect. | 1 | 5 |
| 458 | 84.94 | temperature | 30 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 501 | 85.06 | temperature | 10 | 1440 | > th | dose dependent | rect. | 5 | 1 |
| 520 | 85.12 | temperature | 25 | 1440 | < th | dose dependent | rect. | 5 | 1 |
| 586 | 85.36 | temperature | 30 | 270 | < th | dose dependent | rect. | 4 | 23 |
| 612 | 85.45 | temperature | 30 | 270 | < th | dose dependent | rect. | 2 | 23 |
| 668 | 85.69 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 683 | 85.75 | temperature | 30 | 270 | < th | dose dependent | rect. | 8 | 23 |
| 710 | 85.86 | temperature | 10 | 1440 | > th | dose dependent | sin | 9 | NA |
| 721 | 85.89 | temperature | 30 | 270 | < th | dose dependent | rect. | 10 | 23 |
| 764 | 86.09 | temperature | 30 | 270 | < th | dose dependent | rect. | 12 | 23 |
| 856 | 86.40 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 887 | 86.53 | temperature | 15 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 977 | 86.84 | temperature | 15 | 10 | > th | dose dependent | rect. | 9 | 23 |