Os03g0337100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0337100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 267.04 | 0.768 | 2.94 | 0.843 | 0.17 | -4.98 | 0.065 | 55.1 | -0.235 | 0.0428 | 33.01 | 88 | -- | -- |
| 289.25 | 0.798 | 3.04 | -0.0163 | 0.166 | 1.55 | 0.0748 | -- | -0.24 | 23.2 | 33.01 | 88 | -- | -- |
| 265.05 | 0.758 | 2.94 | 0.785 | 0.175 | -4.72 | -- | 57.7 | -0.232 | 1.03 | 33.64 | 131 | -- | -- |
| 275.18 | 0.773 | 3.08 | -0.0513 | 0.202 | 3.44 | -- | -- | -0.307 | 23.9 | 34.6 | 128 | -- | -- |
| 266.05 | 0.76 | 2.95 | 0.654 | -- | -5.33 | -- | 62.1 | -0.223 | -- | 33.96 | 133 | -- | -- |
| 297.22 | 0.808 | 3.05 | 0.02 | 0.14 | -- | 0.156 | -- | -0.257 | 21.3 | -- | -- | -- | -- |
| 297.29 | 0.807 | 3.05 | 0.0135 | 0.139 | -- | -- | -- | -0.258 | 21.9 | -- | -- | -- | -- |
| 268.36 | 0.763 | 3.04 | -0.0105 | -- | 4.8 | -- | -- | -0.226 | -- | 35.1 | 174 | -- | -- |
| 270.97 | 0.767 | 3.04 | -- | 0.156 | 4.8 | -- | -- | -0.242 | 0.54 | 35.1 | 145 | -- | -- |
| 298.45 | 0.807 | 3.04 | 0.015 | -- | -- | -- | -- | -0.258 | -- | -- | -- | -- | -- |
| 297.29 | 0.807 | 3.05 | -- | 0.139 | -- | -- | -- | -0.259 | 21.9 | -- | -- | -- | -- |
| 268.37 | 0.763 | 3.04 | -- | -- | 4.79 | -- | -- | -0.229 | -- | 35.1 | 174 | -- | -- |
| 298.45 | 0.806 | 3.05 | -- | -- | -- | -- | -- | -0.26 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 266.04 | temperature | 30 | 10 | > th | dose dependent | sin | 14 | NA |
| 3 | 266.43 | atmosphere | 1000 | 90 | < th | dose dependent | rect. | 13 | 3 |
| 10 | 268.38 | temperature | 30 | 10 | > th | dose dependent | rect. | 14 | 4 |
| 12 | 268.75 | temperature | 30 | 30 | > th | dose dependent | rect. | 16 | 1 |
| 28 | 268.83 | atmosphere | 1000 | 10 | < th | dose dependent | rect. | 12 | 5 |
| 30 | 268.85 | atmosphere | 1000 | 10 | < th | dose dependent | rect. | 14 | 2 |
| 39 | 269.70 | atmosphere | 1000 | 90 | < th | dose dependent | rect. | 14 | 1 |
| 40 | 269.71 | temperature | 30 | 10 | > th | dose dependent | rect. | 14 | 2 |
| 47 | 270.11 | atmosphere | 995 | 10 | > th | dose independent | sin | 6 | NA |
| 49 | 270.14 | humidity | 50 | 270 | < th | dose independent | rect. | 13 | 2 |
| 50 | 270.14 | humidity | 50 | 270 | < th | dose dependent | rect. | 13 | 2 |
| 54 | 270.22 | atmosphere | 1000 | 270 | < th | dose independent | rect. | 12 | 1 |
| 56 | 270.28 | atmosphere | 1000 | 270 | < th | dose dependent | rect. | 12 | 1 |
| 59 | 270.63 | atmosphere | 1000 | 10 | < th | dose dependent | rect. | 16 | 1 |
| 98 | 271.36 | atmosphere | 995 | 90 | < th | dose independent | rect. | 14 | 1 |
| 99 | 271.36 | atmosphere | 995 | 10 | < th | dose independent | rect. | 15 | 1 |
| 225 | 271.36 | atmosphere | 995 | 10 | < th | dose dependent | sin | 6 | NA |
| 353 | 271.37 | atmosphere | 995 | 10 | < th | dose independent | sin | 6 | NA |
| 386 | 272.09 | temperature | 30 | 90 | > th | dose dependent | rect. | 13 | 22 |
| 395 | 272.32 | temperature | 30 | 90 | > th | dose dependent | rect. | 11 | 6 |
| 422 | 272.49 | temperature | 30 | 90 | > th | dose dependent | rect. | 18 | 23 |
| 622 | 273.61 | temperature | 30 | 90 | > th | dose dependent | no | NA | NA |
| 764 | 274.06 | temperature | 30 | 270 | > th | dose dependent | rect. | 12 | 1 |
| 766 | 274.08 | temperature | 30 | 270 | > th | dose dependent | rect. | 11 | 3 |
| 959 | 275.82 | temperature | 30 | 270 | > th | dose dependent | sin | 5 | NA |