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Os03g0336300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Peptidase M16, C-terminal domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.8 (0.0114) R2 : 0.0385
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.102 (0.0239) R2dN8 : 0.0498 R2N8 : 0.0385
σ : 0.214
deviance : 21
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
12.57 0.167 11.8 -0.262 0.244 -0.27 -0.434 0.272 0.136 1.21 10 1304 -- --
12.71 0.166 11.8 -0.296 0.247 -0.267 -0.396 -- 0.122 1.13 10 1280 -- --
13.32 0.17 11.8 -0.258 0.249 -0.274 -- 0.177 0.14 1.09 10 1303 -- --
13.36 0.17 11.8 -0.285 0.245 -0.267 -- -- 0.125 1.09 10 1303 -- --
14.39 0.177 11.8 -0.24 -- -0.384 -- 0.628 0.149 -- -14.87 1775 -- --
15.15 0.182 11.8 -0.344 0.195 -- -0.445 -- 0.0599 1.53 -- -- -- --
15.95 0.187 11.8 -0.329 0.195 -- -- -- 0.0624 1.49 -- -- -- --
14.84 0.179 11.8 -0.295 -- -0.376 -- -- 0.13 -- -18.45 1775 -- --
15.45 0.183 11.8 -- 0.234 -0.267 -- -- 0.147 0.985 10.04 1304 -- --
18.28 0.2 11.8 -0.321 -- -- -- -- 0.0666 -- -- -- -- --
18.8 0.203 11.8 -- 0.189 -- -- -- 0.0991 1.43 -- -- -- --
17.12 0.193 11.8 -- -- -0.399 -- -- 0.168 -- -9.273 1773 -- --
21 0.214 11.8 -- -- -- -- -- 0.102 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 11.87 radiation 20 4320 > th dose dependent rect. 6 2
16 11.95 radiation 1 1440 < th dose independent rect. 13 1
17 11.95 radiation 1 1440 < th dose dependent rect. 13 1
22 11.99 radiation 20 4320 > th dose independent rect. 6 2
46 12.10 radiation 1 1440 > th dose independent rect. 13 1
49 12.14 radiation 30 4320 < th dose independent rect. 22 10
54 12.18 radiation 30 4320 < th dose independent rect. 5 3
56 12.19 radiation 30 4320 < th dose independent rect. 7 1
86 12.40 radiation 20 1440 < th dose dependent rect. 11 1
114 12.51 radiation 1 1440 > th dose dependent rect. 11 2
124 12.59 humidity 90 720 > th dose dependent rect. 20 1
125 12.59 radiation 40 1440 < th dose dependent rect. 11 2
131 12.65 radiation 20 1440 < th dose dependent rect. 11 21
139 12.71 humidity 50 1440 > th dose dependent rect. 12 1
140 12.71 radiation 1 1440 > th dose dependent rect. 11 22
144 12.72 humidity 90 1440 < th dose dependent rect. 12 1
148 12.74 humidity 80 1440 < th dose independent rect. 7 7
153 12.74 radiation 20 1440 < th dose dependent rect. 11 6
174 12.76 radiation 20 1440 < th dose dependent rect. 11 12
209 12.78 radiation 10 1440 < th dose dependent sin 22 NA
211 12.78 radiation 40 1440 < th dose dependent rect. 11 4
256 12.81 radiation 20 1440 < th dose independent rect. 11 2
260 12.81 radiation 1 1440 > th dose dependent sin 21 NA
271 12.82 humidity 80 1440 > th dose independent rect. 6 9
273 12.82 radiation 10 1440 > th dose independent rect. 11 22
283 12.82 radiation 40 1440 < th dose dependent rect. 11 6
288 12.83 humidity 70 1440 < th dose independent rect. 11 2
292 12.83 humidity 90 720 > th dose dependent rect. 20 3
293 12.83 radiation 40 1440 > th dose dependent rect. 10 4
297 12.83 radiation 1 1440 > th dose dependent rect. 8 7
305 12.83 radiation 1 1440 > th dose dependent rect. 7 10
311 12.83 radiation 40 1440 < th dose dependent rect. 11 12
339 12.83 radiation 1 1440 > th dose dependent rect. 16 23
340 12.84 humidity 80 1440 < th dose independent sin 3 NA
346 12.84 radiation 20 1440 < th dose independent rect. 11 22
409 12.85 humidity 60 14400 > th dose independent rect. 1 7
412 12.85 radiation 1 1440 > th dose dependent no NA NA
440 12.85 humidity 80 1440 < th dose dependent rect. 23 15
535 12.86 humidity 70 1440 < th dose independent rect. 9 4
544 12.86 radiation 40 1440 < th dose dependent sin 22 NA
646 12.87 radiation 10 1440 < th dose dependent rect. 7 11
648 12.87 humidity 80 1440 < th dose dependent rect. 2 12
669 12.87 radiation 10 1440 < th dose dependent rect. 7 17
681 12.88 humidity 80 1440 > th dose independent sin 2 NA
697 12.88 humidity 80 1440 < th dose dependent rect. 7 7
706 12.88 humidity 80 1440 < th dose dependent rect. 4 10
714 12.88 radiation 40 1440 < th dose dependent rect. 7 11
754 12.88 radiation 40 1440 < th dose dependent rect. 7 16
810 12.88 radiation 40 1440 < th dose dependent rect. 7 20
849 12.88 radiation 1 1440 > th dose dependent rect. 14 23
860 12.89 humidity 70 1440 > th dose independent rect. 9 5
863 12.89 radiation 10 1440 > th dose independent rect. 16 22
865 12.89 radiation 40 1440 > th dose dependent sin 18 NA
946 12.89 radiation 40 1440 < th dose dependent rect. 2 21
967 12.89 radiation 40 1440 < th dose dependent rect. 16 23
987 12.90 radiation 40 1440 < th dose dependent no NA NA