Os03g0336000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein prenyltransferase domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os03g0336000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Protein prenyltransferase domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 101.96 | 0.474 | 8.74 | 1.34 | 0.724 | 0.513 | -0.516 | 2.14 | -0.615 | 21.9 | 86 | 5544 | -- | -- |
| 100.96 | 0.468 | 8.75 | 1.44 | 0.665 | 0.974 | -0.269 | -- | -0.584 | 22.3 | 64.17 | 19495 | -- | -- |
| 102.86 | 0.472 | 8.74 | 1.35 | 0.74 | 0.502 | -- | 2.09 | -0.621 | 22 | 86.46 | 5707 | -- | -- |
| 99.21 | 0.464 | 8.7 | 1.63 | 0.734 | 1.23 | -- | -- | -0.474 | 22.1 | 61.88 | 19548 | -- | -- |
| 131.7 | 0.534 | 8.74 | 1.38 | -- | 0.883 | -- | 2.29 | -0.682 | -- | 87.38 | 5265 | -- | -- |
| 113.92 | 0.5 | 8.71 | 1.2 | 0.756 | -- | -0.365 | -- | -0.558 | 22 | -- | -- | -- | -- |
| 114.44 | 0.501 | 8.71 | 1.22 | 0.757 | -- | -- | -- | -0.557 | 22.1 | -- | -- | -- | -- |
| 131.88 | 0.535 | 8.68 | 1.68 | -- | 1.31 | -- | -- | -0.485 | -- | 63.22 | 19607 | -- | -- |
| 131.97 | 0.535 | 8.74 | -- | 0.732 | 0.945 | -- | -- | -0.653 | 21.7 | 41.79 | 9807 | -- | -- |
| 149.05 | 0.57 | 8.69 | 1.23 | -- | -- | -- | -- | -0.556 | -- | -- | -- | -- | -- |
| 153.57 | 0.58 | 8.74 | -- | 0.762 | -- | -- | -- | -0.693 | 22.2 | -- | -- | -- | -- |
| 163.28 | 0.595 | 8.73 | -- | -- | 1.07 | -- | -- | -0.707 | -- | 122.1 | 897 | -- | -- |
| 188.88 | 0.641 | 8.72 | -- | -- | -- | -- | -- | -0.692 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 93.81 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 6 |
| 2 | 93.81 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 6 |
| 3 | 93.84 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 6 |
| 4 | 94.02 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 3 |
| 5 | 94.02 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 3 |
| 6 | 94.05 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 6 |
| 11 | 94.21 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 3 |
| 18 | 94.37 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 3 |
| 61 | 96.02 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 66 | 96.36 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 7 |
| 74 | 96.49 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 4 |
| 123 | 97.64 | temperature | 25.0 | 14400 | < th | dose dependent | rect. | 8 | 2 |
| 124 | 97.65 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 9 | 1 |
| 126 | 97.71 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 150 | 98.10 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 7 | 3 |
| 152 | 98.11 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 7 | 7 |
| 163 | 98.22 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 201 | 98.63 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 214 | 98.70 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 222 | 98.76 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 7 | 7 |
| 233 | 98.84 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 244 | 98.91 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 245 | 98.91 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 7 | 4 |
| 272 | 99.01 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 7 | 1 |
| 284 | 99.09 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 1 |
| 286 | 99.09 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 1 |
| 297 | 99.12 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 325 | 99.19 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 328 | 99.19 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 2 | 20 |
| 347 | 99.26 | precipitation | 0.1 | 14400 | < th | dose independent | sin | 3 | NA |
| 351 | 99.26 | precipitation | 0.1 | 14400 | < th | dose dependent | sin | 3 | NA |
| 358 | 99.28 | precipitation | 0.1 | 14400 | > th | dose independent | sin | 3 | NA |
| 361 | 99.29 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 18 | 3 |
| 362 | 99.29 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 13 | 1 |
| 375 | 99.32 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 12 | 2 |
| 379 | 99.33 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 1 |
| 381 | 99.33 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 428 | 99.50 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 23 | NA |
| 466 | 99.63 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 22 |
| 493 | 99.72 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 501 | 99.74 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 7 | 15 |
| 515 | 99.77 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 537 | 99.80 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 554 | 99.84 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 565 | 99.90 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 12 | 2 |
| 588 | 99.94 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 18 | 7 |
| 638 | 100.04 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 8 | 7 |
| 656 | 100.07 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 658 | 100.07 | temperature | 25.0 | 14400 | < th | dose dependent | rect. | 15 | 1 |
| 660 | 100.08 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 10 | 5 |
| 673 | 100.10 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 8 | 7 |
| 682 | 100.11 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 683 | 100.11 | wind | 3.0 | 43200 | < th | dose independent | rect. | 5 | 2 |
| 802 | 100.27 | temperature | 25.0 | 14400 | < th | dose dependent | sin | 23 | NA |
| 814 | 100.29 | wind | 3.0 | 43200 | > th | dose independent | rect. | 5 | 2 |
| 853 | 100.33 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 16 | 18 |
| 892 | 100.38 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 910 | 100.39 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 15 | 13 |
| 987 | 100.47 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 12 | 17 |