Os03g0335500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein kinase-like domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os03g0335500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Protein kinase-like domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 98.55 | 0.466 | 3.34 | -1.23 | 0.305 | 0.923 | -1.3 | -1.02 | -0.307 | 22.2 | 18.2 | 1093 | -- | -- |
| 99.61 | 0.465 | 3.35 | -1.27 | 0.307 | 1.21 | -1.18 | -- | -0.298 | 22.1 | 18.2 | 1145 | -- | -- |
| 103.77 | 0.474 | 3.34 | -1.18 | 0.249 | 1.12 | -- | -0.747 | -0.305 | 22.3 | 18 | 1375 | -- | -- |
| 104.12 | 0.475 | 3.35 | -1.23 | 0.256 | 1.31 | -- | -- | -0.309 | 22.1 | 18.08 | 1375 | -- | -- |
| 107.47 | 0.483 | 3.33 | -1.17 | -- | 1.14 | -- | -0.735 | -0.298 | -- | 18.04 | 1442 | -- | -- |
| 113.11 | 0.499 | 3.38 | -1.61 | 0.251 | -- | -1.13 | -- | -0.445 | 21.5 | -- | -- | -- | -- |
| 117.79 | 0.508 | 3.38 | -1.56 | 0.256 | -- | -- | -- | -0.444 | 21.5 | -- | -- | -- | -- |
| 107.88 | 0.484 | 3.35 | -1.22 | -- | 1.33 | -- | -- | -0.306 | -- | 18.03 | 1462 | -- | -- |
| 123.1 | 0.517 | 3.28 | -- | 0.251 | 1.47 | -- | -- | 0.0143 | 22.1 | 19.33 | 10226 | -- | -- |
| 121.64 | 0.515 | 3.38 | -1.56 | -- | -- | -- | -- | -0.444 | -- | -- | -- | -- | -- |
| 182.27 | 0.632 | 3.35 | -- | 0.256 | -- | -- | -- | -0.269 | 21 | -- | -- | -- | -- |
| 116.93 | 0.504 | 3.27 | -- | -- | 1.37 | -- | -- | 0.034 | -- | 18 | 47520 | -- | -- |
| 186.04 | 0.637 | 3.34 | -- | -- | -- | -- | -- | -0.271 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 98.08 | temperature | 10 | 90 | > th | dose dependent | rect. | 12 | 23 |
| 2 | 98.50 | temperature | 15 | 10 | > th | dose independent | rect. | 12 | 23 |
| 12 | 99.46 | temperature | 25 | 1440 | < th | dose dependent | rect. | 19 | 2 |
| 13 | 99.49 | temperature | 25 | 90 | < th | dose independent | rect. | 10 | 1 |
| 16 | 99.67 | temperature | 30 | 720 | < th | dose dependent | rect. | 24 | 21 |
| 19 | 99.73 | atmosphere | 1010 | 30 | < th | dose independent | rect. | 12 | 23 |
| 24 | 99.82 | temperature | 20 | 1440 | > th | dose independent | rect. | 19 | 3 |
| 26 | 99.85 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 22 |
| 27 | 99.86 | radiation | 1 | 10 | > th | dose dependent | rect. | 11 | 1 |
| 36 | 100.03 | temperature | 20 | 1440 | < th | dose independent | rect. | 19 | 3 |
| 47 | 100.21 | radiation | 20 | 30 | > th | dose independent | rect. | 11 | 1 |
| 49 | 100.21 | temperature | 20 | 1440 | < th | dose dependent | rect. | 12 | 18 |
| 50 | 100.22 | temperature | 25 | 1440 | < th | dose dependent | rect. | 14 | 10 |
| 52 | 100.24 | temperature | 25 | 1440 | < th | dose dependent | rect. | 12 | 12 |
| 72 | 100.32 | temperature | 10 | 720 | > th | dose dependent | rect. | 2 | 22 |
| 73 | 100.34 | temperature | 20 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 74 | 100.34 | temperature | 25 | 1440 | < th | dose dependent | sin | 16 | NA |
| 193 | 100.72 | temperature | 10 | 1440 | > th | dose dependent | rect. | 19 | 2 |
| 194 | 100.72 | temperature | 10 | 720 | > th | dose dependent | rect. | 2 | 15 |
| 201 | 100.73 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 21 |
| 204 | 100.74 | temperature | 20 | 720 | < th | dose independent | rect. | 6 | 1 |
| 276 | 100.85 | temperature | 25 | 1440 | < th | dose dependent | rect. | 18 | 23 |
| 278 | 100.86 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 347 | 100.94 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 20 |
| 394 | 101.02 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 22 |
| 407 | 101.05 | temperature | 30 | 10 | < th | dose independent | rect. | 11 | 2 |
| 514 | 101.20 | temperature | 20 | 1440 | < th | dose dependent | rect. | 3 | 2 |
| 527 | 101.21 | temperature | 10 | 720 | > th | dose dependent | rect. | 18 | 23 |
| 682 | 101.42 | temperature | 15 | 90 | > th | dose independent | rect. | 11 | 1 |
| 719 | 101.47 | temperature | 30 | 90 | < th | dose dependent | rect. | 10 | 16 |
| 736 | 101.50 | wind | 9 | 90 | < th | dose independent | rect. | 12 | 23 |
| 738 | 101.50 | temperature | 30 | 720 | < th | dose dependent | sin | 1 | NA |
| 774 | 101.54 | radiation | 1 | 14400 | < th | dose independent | rect. | 11 | 5 |
| 838 | 101.60 | radiation | 1 | 14400 | > th | dose independent | rect. | 11 | 5 |
| 859 | 101.62 | wind | 9 | 10 | < th | dose independent | rect. | 12 | 23 |
| 897 | 101.64 | temperature | 10 | 1440 | > th | dose dependent | rect. | 14 | 16 |
| 910 | 101.65 | temperature | 10 | 1440 | > th | dose dependent | rect. | 18 | 12 |
| 924 | 101.66 | temperature | 10 | 1440 | > th | dose dependent | sin | 14 | NA |
| 938 | 101.67 | temperature | 10 | 1440 | > th | dose dependent | rect. | 5 | 1 |
| 952 | 101.68 | temperature | 10 | 720 | > th | dose dependent | no | NA | NA |
| 985 | 101.70 | radiation | 1 | 14400 | > th | dose independent | rect. | 13 | 3 |