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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os03g0333700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3 (0.0201) R2 : 0.0105
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0935 (0.0424) R2dN8 : 0.0136 R2N8 : 0.0105
σ : 0.379
deviance : 66.07
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
63.11 0.373 3.01 0.0475 0.154 -0.245 0.193 0.993 0.0958 20.6 1 16 -- --
63.92 0.372 3 0.0907 0.146 -0.179 0.182 -- 0.108 20.5 1 11 -- --
63.23 0.37 3.01 0.0463 0.152 -0.244 -- 0.988 0.0982 20.7 1.01 16 -- --
64.01 0.373 3 0.0858 0.144 -0.168 -- -- 0.107 21 1.021 11 -- --
64.53 0.374 3 0.0485 -- -0.208 -- 0.914 0.0953 -- 1.066 16 -- --
64.61 0.377 3 0.107 0.137 -- 0.114 -- 0.105 21.9 -- -- -- --
64.66 0.377 3 0.102 0.136 -- -- -- 0.105 22.2 -- -- -- --
65.2 0.376 3 0.0866 -- -0.148 -- -- 0.106 -- 1.095 11 -- --
64.2 0.373 3 -- 0.146 -0.178 -- -- 0.0982 20.9 1 10 -- --
65.78 0.379 3 0.104 -- -- -- -- 0.105 -- -- -- -- --
64.93 0.377 3 -- 0.137 -- -- -- 0.0934 22.3 -- -- -- --
65.39 0.377 3 -- -- -0.158 -- -- 0.0963 -- 1.018 11 -- --
66.07 0.379 3 -- -- -- -- -- 0.0935 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 58.25 temperature 25.0 10 > th dose dependent rect. 22 1
2 58.67 atmosphere 1000.0 10 < th dose independent rect. 21 1
9 58.67 atmosphere 1000.0 10 < th dose dependent rect. 21 1
28 59.67 wind 3.0 10 > th dose independent rect. 21 2
32 60.31 atmosphere 1010.0 30 < th dose dependent rect. 22 1
33 60.38 temperature 25.0 10 > th dose independent rect. 22 1
37 60.50 humidity 90.0 10 < th dose dependent rect. 22 1
39 60.55 wind 1.0 10 > th dose dependent rect. 22 1
43 60.70 temperature 20.0 10 < th dose independent rect. 11 1
49 60.70 humidity 90.0 90 > th dose independent rect. 10 1
51 60.70 precipitation 0.1 90 > th dose independent rect. 10 1
66 60.70 temperature 20.0 90 < th dose dependent rect. 10 1
67 60.70 temperature 20.0 10 < th dose dependent rect. 11 1
73 60.70 humidity 90.0 90 > th dose dependent rect. 10 1
75 60.70 precipitation 0.1 90 > th dose dependent rect. 10 1
112 60.86 humidity 90.0 10 < th dose independent rect. 22 1
137 61.03 temperature 20.0 10 > th dose dependent rect. 2 1
140 61.04 wind 1.0 30 < th dose dependent rect. 2 1
145 61.07 wind 1.0 30 < th dose independent rect. 2 1
146 61.07 temperature 20.0 30 > th dose independent rect. 2 1
147 61.07 humidity 90.0 30 > th dose independent rect. 2 1
156 61.08 atmosphere 1005.0 30 > th dose independent rect. 2 1
161 61.09 wind 9.0 30 < th dose independent rect. 2 1
162 61.09 temperature 10.0 30 > th dose independent rect. 2 1
164 61.09 temperature 25.0 30 < th dose independent rect. 2 1
166 61.09 humidity 50.0 30 > th dose independent rect. 2 1
169 61.09 atmosphere 995.0 30 > th dose independent rect. 2 1
171 61.09 atmosphere 1010.0 30 < th dose independent rect. 2 1
173 61.09 radiation 1.0 30 < th dose independent rect. 2 1
178 61.09 precipitation 0.1 30 < th dose independent rect. 2 1
179 61.09 temperature 10.0 30 > th dose independent rect. 3 23
181 61.09 humidity 50.0 30 > th dose dependent rect. 2 1
185 61.09 atmosphere 995.0 30 > th dose dependent rect. 2 1
189 61.09 radiation 1.0 30 < th dose dependent rect. 2 1
194 61.09 precipitation 0.1 30 < th dose dependent rect. 2 1
200 61.10 atmosphere 1015.0 30 < th dose dependent rect. 2 1
211 61.13 temperature 30.0 30 < th dose dependent rect. 2 1
215 61.14 wind 1.0 30 > th dose independent rect. 2 1
248 61.16 precipitation 0.1 30 < th dose independent rect. 3 23
249 61.16 precipitation 0.1 30 < th dose dependent rect. 3 23
258 61.22 wind 9.0 30 < th dose independent rect. 3 23
263 61.25 precipitation 0.1 30 < th dose independent rect. 22 1
264 61.25 atmosphere 995.0 30 > th dose independent rect. 3 23
265 61.25 precipitation 0.1 30 < th dose dependent rect. 22 1
276 61.29 wind 5.0 30 < th dose independent rect. 22 1
279 61.29 temperature 10.0 30 > th dose independent rect. 22 1
281 61.29 temperature 30.0 30 < th dose independent rect. 22 1
282 61.29 humidity 50.0 30 > th dose independent rect. 22 1
285 61.29 atmosphere 995.0 30 > th dose independent rect. 22 1
286 61.29 atmosphere 1010.0 30 < th dose independent rect. 22 1
288 61.29 radiation 1.0 30 < th dose independent rect. 22 1
293 61.29 temperature 10.0 30 > th dose independent rect. 23 23
295 61.29 radiation 1.0 30 < th dose dependent rect. 22 1
319 61.39 atmosphere 1005.0 30 > th dose dependent rect. 22 1
321 61.40 humidity 50.0 30 > th dose dependent rect. 22 1
322 61.41 wind 9.0 1440 < th dose independent rect. 23 1
323 61.41 temperature 10.0 1440 > th dose independent rect. 23 1
326 61.41 temperature 30.0 1440 < th dose independent rect. 23 1
330 61.41 humidity 50.0 1440 > th dose independent rect. 23 1
340 61.41 atmosphere 995.0 1440 > th dose independent rect. 23 1
341 61.41 radiation 1.0 1440 < th dose independent rect. 23 1
362 61.41 temperature 10.0 1440 > th dose independent rect. 24 23
366 61.41 radiation 1.0 1440 < th dose dependent rect. 23 1
374 61.44 wind 9.0 30 < th dose dependent rect. 22 1
377 61.45 radiation 10.0 43200 < th dose dependent rect. 3 1
379 61.46 wind 9.0 1440 < th dose independent rect. 3 1
380 61.46 temperature 10.0 1440 > th dose independent rect. 3 1
383 61.46 temperature 30.0 1440 < th dose independent rect. 3 1
387 61.46 humidity 50.0 1440 > th dose independent rect. 3 1
396 61.46 atmosphere 995.0 1440 > th dose independent rect. 3 1
397 61.46 radiation 1.0 1440 < th dose independent rect. 3 1
418 61.46 temperature 10.0 1440 > th dose independent rect. 4 23
421 61.46 radiation 1.0 1440 < th dose dependent rect. 3 1
444 61.51 atmosphere 995.0 30 > th dose dependent rect. 22 1
450 61.56 atmosphere 1005.0 30 > th dose independent rect. 22 1
481 61.62 atmosphere 1000.0 270 < th dose dependent rect. 18 4
492 61.72 wind 9.0 30 < th dose independent rect. 23 23
503 61.80 temperature 30.0 30 < th dose dependent rect. 22 1
527 61.95 atmosphere 1000.0 270 < th dose independent rect. 18 1
533 61.99 temperature 20.0 30 > th dose dependent rect. 21 6
541 62.03 wind 3.0 30 < th dose dependent rect. 24 3
594 62.12 humidity 90.0 90 > th dose independent rect. 14 1
598 62.12 humidity 90.0 90 > th dose dependent rect. 14 1
622 62.20 radiation 10.0 90 < th dose independent rect. 14 13
626 62.21 atmosphere 1015.0 30 < th dose independent rect. 3 23
634 62.23 wind 1.0 10 > th dose independent rect. 23 22
637 62.24 atmosphere 995.0 720 > th dose independent rect. 23 16
642 62.26 humidity 70.0 90 > th dose independent rect. 10 17
644 62.27 radiation 1.0 10 < th dose independent rect. 15 1
683 62.30 temperature 15.0 720 > th dose independent rect. 23 16
685 62.31 atmosphere 995.0 720 > th dose independent rect. 3 21
687 62.31 radiation 20.0 90 < th dose dependent rect. 14 13
707 62.33 radiation 30.0 90 < th dose dependent rect. 11 16
721 62.37 temperature 30.0 270 > th dose independent rect. 18 1
762 62.44 radiation 10.0 90 < th dose dependent rect. 14 1
768 62.45 radiation 1.0 10 < th dose dependent rect. 15 1
792 62.48 temperature 25.0 270 > th dose independent rect. 23 1
793 62.48 humidity 90.0 90 > th dose independent rect. 10 6
826 62.51 temperature 25.0 270 > th dose dependent rect. 23 1
835 62.54 humidity 50.0 30 > th dose independent rect. 3 23
843 62.56 humidity 90.0 90 > th dose dependent rect. 10 6
845 62.57 temperature 15.0 720 > th dose independent rect. 3 8
940 62.68 humidity 90.0 90 < th dose independent rect. 2 1
951 62.69 atmosphere 995.0 1440 > th dose independent rect. 15 10
952 62.69 atmosphere 995.0 720 > th dose independent rect. 15 22
958 62.70 temperature 25.0 270 > th dose independent rect. 22 4
962 62.70 radiation 1.0 10 < th dose independent rect. 13 14
968 62.70 humidity 50.0 720 > th dose independent rect. 15 21
979 62.70 temperature 25.0 10 > th dose dependent rect. 21 9
981 62.70 temperature 10.0 30 > th dose dependent rect. 3 18
989 62.71 radiation 1.0 10 < th dose independent rect. 15 12
991 62.71 humidity 70.0 90 > th dose independent rect. 14 13