Os03g0333300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Eukaryotic translation initiation factor 2 beta subunit (eIF-2-beta) (P38).
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Os03g0333300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Eukaryotic translation initiation factor 2 beta subunit (eIF-2-beta) (P38).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 25.01 | 0.235 | 11.8 | 0.0315 | 0.373 | -0.203 | 0.0799 | -2.03 | -0.207 | 15.9 | 30.65 | 2576 | -- | -- |
| 25.28 | 0.234 | 11.8 | 0.354 | 0.396 | -0.424 | 0.0889 | -- | -0.207 | 15.9 | 31.36 | 5110 | -- | -- |
| 25.03 | 0.233 | 11.8 | 0.0271 | 0.373 | -0.199 | -- | -2.07 | -0.206 | 15.9 | 30.7 | 2575 | -- | -- |
| 25.2 | 0.234 | 11.8 | 0.344 | 0.38 | -0.433 | -- | -- | -0.199 | 16 | 30.73 | 2588 | -- | -- |
| 32.57 | 0.266 | 11.8 | -0.0533 | -- | -0.191 | -- | -2.57 | -0.225 | -- | 30.79 | 2591 | -- | -- |
| 32.63 | 0.268 | 11.7 | 0.242 | 0.415 | -- | 0.165 | -- | -0.128 | 15.6 | -- | -- | -- | -- |
| 32.72 | 0.268 | 11.7 | 0.245 | 0.415 | -- | -- | -- | -0.127 | 15.6 | -- | -- | -- | -- |
| 32.82 | 0.267 | 11.8 | 0.353 | -- | -0.488 | -- | -- | -0.226 | -- | 30.54 | 2591 | -- | -- |
| 28.4 | 0.248 | 11.8 | -- | 0.384 | -0.385 | -- | -- | -0.241 | 15.9 | 30.6 | 2572 | -- | -- |
| 42.3 | 0.304 | 11.7 | 0.228 | -- | -- | -- | -- | -0.138 | -- | -- | -- | -- | -- |
| 34.3 | 0.274 | 11.8 | -- | 0.41 | -- | -- | -- | -0.154 | 15.6 | -- | -- | -- | -- |
| 35.97 | 0.279 | 11.8 | -- | -- | -0.43 | -- | -- | -0.252 | -- | 30.7 | 2580 | -- | -- |
| 43.67 | 0.308 | 11.8 | -- | -- | -- | -- | -- | -0.163 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 25.29 | temperature | 30 | 1440 | > th | dose dependent | rect. | 10 | 1 |
| 37 | 25.37 | temperature | 30 | 1440 | > th | dose dependent | sin | 7 | NA |
| 42 | 25.39 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 2 |
| 60 | 25.42 | temperature | 30 | 1440 | > th | dose independent | rect. | 9 | 2 |
| 90 | 25.49 | temperature | 30 | 1440 | < th | dose independent | rect. | 4 | 8 |
| 94 | 25.49 | temperature | 30 | 1440 | < th | dose independent | rect. | 20 | 16 |
| 143 | 25.52 | temperature | 30 | 4320 | > th | dose dependent | rect. | 14 | 5 |
| 173 | 25.53 | temperature | 30 | 4320 | > th | dose dependent | rect. | 15 | 2 |
| 231 | 25.56 | temperature | 30 | 1440 | > th | dose independent | rect. | 18 | 19 |
| 236 | 25.56 | temperature | 25 | 1440 | > th | dose dependent | rect. | 3 | 5 |
| 264 | 25.57 | temperature | 30 | 4320 | > th | dose dependent | sin | 13 | NA |
| 281 | 25.58 | temperature | 30 | 1440 | < th | dose independent | sin | 8 | NA |
| 303 | 25.59 | temperature | 30 | 1440 | > th | dose dependent | no | NA | NA |
| 411 | 25.60 | temperature | 30 | 1440 | > th | dose independent | sin | 8 | NA |
| 424 | 25.60 | temperature | 25 | 720 | > th | dose dependent | rect. | 16 | 17 |
| 433 | 25.61 | temperature | 25 | 1440 | > th | dose dependent | rect. | 5 | 2 |
| 811 | 25.82 | temperature | 30 | 4320 | < th | dose independent | rect. | 16 | 1 |
| 849 | 25.86 | temperature | 25 | 4320 | > th | dose dependent | rect. | 22 | 1 |
| 920 | 25.90 | temperature | 30 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 941 | 25.93 | temperature | 30 | 1440 | > th | dose independent | no | NA | NA |
| 943 | 25.93 | temperature | 30 | 1440 | > th | dose independent | rect. | 8 | 11 |