Os03g0331600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0331600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 41.9 | 0.304 | 14.9 | -0.00272 | 0.877 | 0.817 | 0.0545 | -1.37 | -0.359 | 21 | 25.38 | 97 | -- | -- |
| 42.48 | 0.304 | 14.9 | 0.132 | 0.901 | 0.683 | 0.0751 | -- | -0.327 | 20.9 | 25.53 | 56 | -- | -- |
| 41.91 | 0.302 | 14.9 | -0.00488 | 0.878 | 0.816 | -- | -1.38 | -0.357 | 21 | 25.4 | 96 | -- | -- |
| 42.46 | 0.303 | 14.9 | 0.158 | 0.903 | 0.697 | -- | -- | -0.315 | 20.9 | 25.59 | 56 | -- | -- |
| 67.92 | 0.384 | 14.9 | -0.182 | -- | 1.21 | -- | -1.62 | -0.463 | -- | 24.5 | 543 | -- | -- |
| 50.26 | 0.332 | 14.9 | 0.264 | 0.97 | -- | 0.0465 | -- | -0.274 | 19.9 | -- | -- | -- | -- |
| 50.26 | 0.332 | 14.9 | 0.263 | 0.97 | -- | -- | -- | -0.274 | 19.9 | -- | -- | -- | -- |
| 69.92 | 0.389 | 14.9 | 0.0565 | -- | 1.04 | -- | -- | -0.38 | -- | 24.5 | 557 | -- | -- |
| 43.07 | 0.306 | 14.9 | -- | 0.903 | 0.733 | -- | -- | -0.333 | 21 | 25.5 | 56 | -- | -- |
| 101.33 | 0.47 | 14.9 | 0.252 | -- | -- | -- | -- | -0.287 | -- | -- | -- | -- | -- |
| 52.09 | 0.338 | 14.9 | -- | 0.968 | -- | -- | -- | -0.303 | 19.9 | -- | -- | -- | -- |
| 70 | 0.39 | 14.9 | -- | -- | 1.06 | -- | -- | -0.388 | -- | 24.5 | 558 | -- | -- |
| 103.01 | 0.474 | 14.9 | -- | -- | -- | -- | -- | -0.315 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 37.30 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 19 | 20 |
| 9 | 37.98 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 7 | 8 |
| 34 | 38.81 | temperature | 25.0 | 270 | > th | dose dependent | sin | 4 | NA |
| 50 | 39.38 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 7 | 9 |
| 84 | 40.02 | temperature | 25.0 | 90 | > th | dose dependent | sin | 0 | NA |
| 100 | 40.30 | temperature | 30.0 | 90 | < th | dose independent | rect. | 5 | 16 |
| 117 | 40.52 | temperature | 30.0 | 270 | > th | dose independent | rect. | 8 | 6 |
| 147 | 40.67 | temperature | 30.0 | 270 | < th | dose independent | sin | 5 | NA |
| 151 | 40.69 | temperature | 30.0 | 270 | < th | dose independent | rect. | 2 | 12 |
| 160 | 40.78 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 8 | 22 |
| 173 | 40.87 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 179 | 40.89 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 8 | 18 |
| 184 | 40.92 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 6 | 12 |
| 185 | 40.92 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 4 | 14 |
| 186 | 40.92 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 4 | 14 |
| 188 | 40.92 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 4 | 14 |
| 190 | 40.93 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 6 | 12 |
| 192 | 40.93 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 6 | 12 |
| 197 | 40.97 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 8 | 16 |
| 205 | 41.00 | temperature | 30.0 | 270 | < th | dose independent | rect. | 3 | 17 |
| 251 | 41.14 | wind | 5.0 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 288 | 41.22 | wind | 5.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 294 | 41.23 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 6 | 16 |
| 321 | 41.26 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 6 | 16 |
| 326 | 41.26 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 6 | 16 |
| 353 | 41.31 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 6 | 13 |
| 392 | 41.38 | precipitation | 0.1 | 14400 | > th | dose dependent | sin | 0 | NA |
| 414 | 41.41 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 432 | 41.43 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 21 | 2 |
| 439 | 41.43 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 17 |
| 440 | 41.44 | precipitation | 0.1 | 14400 | > th | dose independent | sin | 23 | NA |
| 447 | 41.45 | temperature | 30.0 | 270 | > th | dose independent | sin | 6 | NA |
| 457 | 41.45 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 6 | 20 |
| 460 | 41.46 | precipitation | 0.1 | 14400 | < th | dose independent | sin | 23 | NA |
| 462 | 41.46 | precipitation | 0.1 | 14400 | < th | dose dependent | sin | 23 | NA |
| 546 | 41.56 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 20 | 2 |
| 568 | 41.58 | precipitation | 0.1 | 4320 | > th | dose independent | sin | 1 | NA |
| 590 | 41.60 | temperature | 30.0 | 90 | < th | dose independent | sin | 2 | NA |
| 591 | 41.60 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 17 | 5 |
| 623 | 41.63 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 12 | 10 |
| 627 | 41.63 | radiation | 40.0 | 270 | < th | dose independent | rect. | 1 | 22 |
| 631 | 41.64 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 645 | 41.65 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 16 | 2 |
| 692 | 41.69 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 12 | 7 |
| 704 | 41.71 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 13 | 6 |
| 709 | 41.71 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 13 | 6 |
| 751 | 41.75 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 21 | 1 |
| 757 | 41.76 | wind | 3.0 | 14400 | > th | dose dependent | rect. | 7 | 2 |
| 830 | 41.83 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 832 | 41.83 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 4 |
| 840 | 41.83 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 20 | 23 |
| 855 | 41.84 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 23 | 20 |
| 874 | 41.87 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 2 |
| 876 | 41.87 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 4 |
| 882 | 41.87 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 9 | 14 |
| 884 | 41.87 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 4 |
| 891 | 41.87 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 21 | 21 |
| 911 | 41.89 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 2 |
| 917 | 41.89 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 2 |
| 929 | 41.90 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 12 | 11 |
| 965 | 41.92 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 17 | 6 |
| 970 | 41.92 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 10 | 12 |
| 979 | 41.93 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 14 | 8 |