Os03g0328000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Dedicator of cytokinesis family protein.
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Os03g0328000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Dedicator of cytokinesis family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 70.56 | 0.395 | 10.9 | 1.92 | 1.37 | -1.86 | -0.218 | -0.495 | 0.482 | 1.74 | 0.3451 | 93 | 5.95 | -- |
| 70.89 | 0.392 | 10.9 | 1.9 | 1.36 | -1.85 | -0.673 | -- | 0.506 | 1.79 | 0.3626 | 91 | 5.84 | -- |
| 70.47 | 0.391 | 10.9 | 1.93 | 1.37 | -1.85 | -- | -0.678 | 0.482 | 1.78 | 0.3518 | 94 | 5.96 | -- |
| 72.77 | 0.397 | 10.9 | 1.92 | 1.37 | -1.85 | -- | -- | 0.482 | 1.76 | 0.31 | 94 | 5.95 | -- |
| 87.5 | 0.436 | 10.8 | 1.92 | -- | -0.797 | -- | -0.654 | 0.584 | -- | 0.2805 | 61 | 6.14 | -- |
| 102.65 | 0.475 | 10.8 | 1.95 | 0.774 | -- | 0.706 | -- | 0.579 | 10.8 | -- | -- | -- | -- |
| 104.72 | 0.479 | 10.8 | 1.98 | 0.772 | -- | -- | -- | 0.581 | 10.7 | -- | -- | -- | -- |
| 89.29 | 0.44 | 10.8 | 1.92 | -- | -0.793 | -- | -- | 0.587 | -- | 0.26 | 61 | 6.82 | -- |
| 170.99 | 0.609 | 10.9 | -- | 1.3 | -1.74 | -- | -- | 0.409 | 1.68 | 0.05664 | 87 | 6.21 | -- |
| 141.51 | 0.556 | 10.8 | 1.97 | -- | -- | -- | -- | 0.577 | -- | -- | -- | -- | -- |
| 208.32 | 0.675 | 10.9 | -- | 0.758 | -- | -- | -- | 0.36 | 10.5 | -- | -- | -- | -- |
| 188.53 | 0.64 | 10.9 | -- | -- | -0.819 | -- | -- | 0.358 | -- | 0.009991 | 45 | 6.75 | -- |
| 243.62 | 0.729 | 10.9 | -- | -- | -- | -- | -- | 0.358 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 63.83 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 8 | 19 |
| 2 | 63.92 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 6 | 21 |
| 4 | 64.42 | radiation | 1.0 | 270 | < th | dose independent | rect. | 8 | 19 |
| 10 | 65.57 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 13 | 14 |
| 17 | 66.18 | radiation | 1.0 | 270 | < th | dose independent | rect. | 13 | 14 |
| 49 | 68.84 | humidity | 50.0 | 270 | > th | dose independent | rect. | 7 | 19 |
| 52 | 69.15 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 15 | 16 |
| 53 | 69.15 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 15 | 16 |
| 54 | 69.16 | temperature | 30.0 | 270 | < th | dose independent | rect. | 18 | 9 |
| 57 | 69.31 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 16 |
| 58 | 69.31 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 16 |
| 59 | 69.36 | humidity | 70.0 | 270 | > th | dose independent | rect. | 18 | 9 |
| 64 | 69.42 | humidity | 50.0 | 270 | > th | dose independent | rect. | 6 | 21 |
| 72 | 69.79 | temperature | 15.0 | 270 | > th | dose independent | rect. | 3 | 15 |
| 75 | 70.06 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 17 | 9 |
| 77 | 70.35 | humidity | 60.0 | 270 | > th | dose dependent | rect. | 2 | 5 |
| 84 | 70.56 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 8 | 18 |
| 87 | 70.81 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 2 | 5 |
| 98 | 71.19 | wind | 9.0 | 270 | < th | dose independent | rect. | 3 | 15 |
| 104 | 71.26 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 2 | 5 |
| 106 | 71.26 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 2 | 5 |
| 113 | 71.35 | humidity | 80.0 | 270 | > th | dose independent | rect. | 2 | 5 |
| 115 | 71.40 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 18 | 9 |
| 118 | 71.43 | wind | 9.0 | 270 | < th | dose independent | rect. | 18 | 9 |
| 119 | 71.43 | temperature | 10.0 | 270 | > th | dose independent | rect. | 18 | 9 |
| 125 | 71.43 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 3 | 15 |
| 129 | 71.47 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 3 | 3 |
| 133 | 71.55 | wind | 1.0 | 270 | > th | dose independent | rect. | 7 | 7 |
| 150 | 71.59 | temperature | 10.0 | 270 | > th | dose independent | rect. | 7 | 8 |
| 151 | 71.59 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 7 | 8 |
| 152 | 71.59 | temperature | 10.0 | 270 | > th | dose independent | rect. | 15 | 16 |
| 156 | 71.62 | radiation | 20.0 | 270 | < th | dose independent | rect. | 2 | 5 |
| 158 | 71.62 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 7 | 7 |
| 162 | 71.67 | wind | 7.0 | 270 | < th | dose independent | rect. | 2 | 5 |
| 164 | 71.68 | wind | 9.0 | 270 | < th | dose independent | rect. | 14 | 17 |
| 165 | 71.68 | wind | 9.0 | 270 | < th | dose dependent | rect. | 2 | 5 |
| 167 | 71.69 | temperature | 10.0 | 270 | > th | dose independent | rect. | 2 | 5 |
| 169 | 71.69 | temperature | 30.0 | 270 | < th | dose independent | rect. | 2 | 5 |
| 170 | 71.69 | humidity | 50.0 | 270 | > th | dose independent | rect. | 2 | 5 |
| 173 | 71.69 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 2 | 5 |
| 174 | 71.69 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 2 | 5 |
| 177 | 71.69 | temperature | 10.0 | 270 | > th | dose independent | rect. | 7 | 19 |
| 179 | 71.72 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 7 |
| 180 | 71.72 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 7 |
| 183 | 71.74 | humidity | 50.0 | 270 | > th | dose independent | rect. | 7 | 7 |
| 184 | 71.74 | radiation | 40.0 | 270 | < th | dose independent | rect. | 15 | 16 |
| 187 | 71.79 | radiation | 1.0 | 90 | < th | dose dependent | sin | 12 | NA |
| 189 | 71.85 | humidity | 80.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 202 | 72.15 | radiation | 10.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 203 | 72.15 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 3 |
| 205 | 72.15 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 214 | 72.23 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 2 | 5 |
| 216 | 72.25 | wind | 9.0 | 270 | < th | dose independent | rect. | 7 | 7 |
| 222 | 72.32 | wind | 9.0 | 270 | < th | dose independent | rect. | 7 | 19 |
| 247 | 72.65 | wind | 9.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 248 | 72.65 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 250 | 72.65 | temperature | 30.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 251 | 72.65 | humidity | 50.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 254 | 72.65 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 255 | 72.65 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 259 | 72.65 | temperature | 10.0 | 270 | > th | dose independent | rect. | 6 | 21 |
| 262 | 72.66 | radiation | 1.0 | 270 | < th | dose dependent | sin | 14 | NA |
| 265 | 72.69 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 279 | 72.83 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 7 | 19 |
| 306 | 73.01 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 4 | 16 |
| 337 | 73.19 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 19 | 8 |
| 338 | 73.19 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 19 | 8 |
| 350 | 73.36 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 15 | 16 |
| 354 | 73.40 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 19 | 7 |
| 370 | 73.56 | wind | 9.0 | 270 | < th | dose independent | rect. | 6 | 21 |
| 375 | 73.60 | radiation | 1.0 | 270 | > th | dose independent | rect. | 15 | 15 |
| 420 | 73.84 | radiation | 1.0 | 270 | < th | dose independent | sin | 14 | NA |
| 431 | 73.97 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 14 | 17 |
| 436 | 74.03 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 13 | 8 |
| 437 | 74.04 | wind | 9.0 | 90 | < th | dose dependent | rect. | 4 | 15 |
| 445 | 74.15 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 3 | 15 |
| 456 | 74.23 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 8 | 17 |
| 488 | 74.33 | radiation | 1.0 | 270 | > th | dose independent | rect. | 7 | 7 |
| 493 | 74.41 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 2 | 18 |
| 512 | 74.60 | radiation | 1.0 | 270 | > th | dose independent | sin | 14 | NA |
| 513 | 74.61 | radiation | 1.0 | 90 | < th | dose independent | sin | 12 | NA |
| 517 | 74.62 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 19 |
| 518 | 74.62 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 19 |
| 525 | 74.67 | radiation | 1.0 | 90 | > th | dose independent | sin | 12 | NA |
| 536 | 74.77 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 7 | 19 |
| 599 | 75.24 | wind | 7.0 | 10 | < th | dose independent | rect. | 4 | 16 |
| 600 | 75.25 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 13 | 8 |
| 602 | 75.25 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 13 | 8 |
| 667 | 75.61 | radiation | 1.0 | 90 | > th | dose independent | rect. | 17 | 14 |
| 726 | 75.79 | wind | 1.0 | 270 | > th | dose independent | rect. | 7 | 19 |
| 819 | 76.25 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 21 |
| 822 | 76.25 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 21 |
| 918 | 76.47 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 3 | 3 |
| 954 | 76.55 | wind | 1.0 | 270 | > th | dose independent | rect. | 19 | 8 |