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Os03g0327800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : No apical meristem (NAM) protein domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.79 (0.0664) R2 : 0.684
β1 : 6.95 (0.247) R2dD : 0.593 R2D : 0.381
β2 : 1.84 (0.178) R2dC : 0.0834 R2C : 0.0115
β3 : -4.51 (0.274) R2dE : 0.203 R2E : -0.0183
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 1.38 (0.142) R2dN8 : 0.0859 R2N8 : -0.0258
σ : 1.24
deviance : 708.25
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C
peak time of C : 5.29
E
wheather : temperature
threshold : 25.14
memory length : 664
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 17.7
open length of G : 15.3

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
689.84 1.23 7.69 8.2 1.88 -5.32 -2.13 8.17 1.58 5.06 25.19 660 17.7 15.3
706.08 1.24 7.75 7.12 1.81 -4.19 -2.62 -- 1.51 5.2 25.1 659 17.7 15.8
701.12 1.23 7.69 8.16 1.88 -5.37 -- 7.87 1.56 5.05 25.22 659 17.7 15.3
708.25 1.24 7.79 6.95 1.84 -4.51 -- -- 1.38 5.29 25.14 664 17.7 15.3
805.42 1.32 7.71 8.38 -- -4.58 -- 7.39 1.66 -- 25.4 618 17.3 16.9
1088.83 1.55 7.88 6.25 1.33 -- -2.65 -- 1.09 6.4 -- -- -- --
1104.91 1.56 7.87 6.22 1.32 -- -- -- 1.11 6.84 -- -- -- --
812.64 1.33 7.78 7 -- -3.91 -- -- 1.36 -- 25.4 613 17.3 16.9
1975.75 2.07 7.75 -- 2.11 -3.47 -- -- 1.16 5.36 25 647 18.2 14.6
1196.34 1.62 7.9 6.25 -- -- -- -- 1.13 -- -- -- -- --
2125.36 2.16 8.03 -- 1.4 -- -- -- 0.413 6.57 -- -- -- --
2058.35 2.11 8.05 -- -- -2.45 -- -- 0.362 -- 25.61 611 17.1 17
2227.11 2.2 8.05 -- -- -- -- -- 0.437 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 707.44 temperature 25.0 720 > th dose dependent rect. 17 16
2 712.89 temperature 25.0 720 > th dose dependent sin 11 NA
5 715.83 precipitation 0.1 43200 > th dose dependent rect. 5 13
9 718.93 temperature 25.0 14400 > th dose dependent rect. 19 4
11 719.13 humidity 70.0 14400 < th dose independent rect. 19 1
14 720.19 temperature 25.0 14400 > th dose dependent rect. 21 1
22 721.17 wind 3.0 43200 > th dose dependent rect. 5 7
26 721.84 precipitation 0.1 43200 < th dose independent rect. 16 2
27 721.84 precipitation 0.1 43200 < th dose dependent rect. 16 2
28 721.86 wind 5.0 43200 < th dose independent rect. 5 7
30 722.09 temperature 25.0 14400 > th dose dependent rect. 18 12
31 722.28 precipitation 0.1 43200 > th dose independent rect. 16 2
38 722.79 wind 5.0 43200 > th dose independent rect. 5 7
41 722.84 precipitation 0.1 43200 > th dose dependent rect. 5 16
42 722.96 wind 5.0 43200 > th dose independent rect. 5 9
43 723.02 precipitation 0.1 43200 > th dose dependent rect. 13 5
57 723.81 temperature 25.0 14400 > th dose independent rect. 19 8
58 723.85 precipitation 0.1 43200 > th dose dependent rect. 10 8
61 723.95 precipitation 0.1 43200 > th dose dependent rect. 17 7
66 724.20 temperature 25.0 14400 > th dose independent rect. 22 2
80 724.71 precipitation 0.1 43200 > th dose dependent rect. 17 5
85 724.82 temperature 25.0 14400 > th dose independent rect. 19 10
88 724.95 wind 5.0 43200 > th dose independent rect. 9 3
98 725.27 wind 5.0 43200 < th dose independent sin 5 NA
114 725.91 temperature 25.0 14400 < th dose independent rect. 19 8
121 726.03 temperature 25.0 14400 < th dose independent rect. 23 1
126 726.17 wind 5.0 43200 < th dose independent rect. 9 3
127 726.24 wind 5.0 43200 > th dose independent sin 4 NA
153 727.24 temperature 25.0 14400 < th dose independent rect. 19 10
172 727.67 wind 5.0 43200 < th dose independent rect. 19 19
175 727.74 radiation 20.0 1440 < th dose independent rect. 16 15
184 728.03 humidity 70.0 14400 < th dose independent rect. 19 12
192 728.22 wind 5.0 43200 > th dose independent rect. 20 19
200 728.47 temperature 25.0 14400 > th dose dependent sin 11 NA
213 728.61 precipitation 0.1 43200 > th dose independent rect. 17 4
217 728.74 precipitation 0.1 43200 < th dose independent rect. 17 4
218 728.74 precipitation 0.1 43200 < th dose dependent rect. 17 4
224 728.88 radiation 20.0 1440 > th dose independent rect. 16 15
225 728.90 wind 5.0 43200 < th dose independent rect. 5 2
252 729.27 radiation 10.0 14400 < th dose independent rect. 16 7
255 729.30 radiation 10.0 14400 < th dose independent rect. 16 5
262 729.33 precipitation 0.1 43200 > th dose dependent rect. 17 15
284 729.68 wind 3.0 43200 > th dose dependent rect. 20 17
285 729.68 precipitation 0.1 43200 > th dose dependent rect. 17 17
293 729.80 wind 5.0 43200 > th dose independent rect. 5 2
306 730.08 humidity 70.0 14400 > th dose independent rect. 19 1
316 730.27 wind 3.0 43200 > th dose dependent sin 6 NA
332 730.69 wind 3.0 43200 > th dose dependent rect. 24 14
338 730.76 precipitation 0.1 43200 > th dose independent rect. 19 2
342 730.85 radiation 10.0 14400 > th dose dependent rect. 16 14
360 731.27 radiation 10.0 14400 > th dose dependent rect. 16 2
373 731.30 temperature 25.0 14400 > th dose independent rect. 20 1
375 731.34 temperature 25.0 14400 > th dose independent sin 11 NA
376 731.36 precipitation 0.1 43200 < th dose independent rect. 19 2
377 731.36 precipitation 0.1 43200 < th dose dependent rect. 19 2
381 731.47 radiation 30.0 14400 > th dose independent rect. 7 1
457 732.13 radiation 20.0 1440 < th dose independent rect. 16 7
472 732.53 radiation 20.0 14400 < th dose dependent rect. 16 7
477 732.58 radiation 20.0 14400 < th dose dependent rect. 16 5
482 732.63 humidity 70.0 14400 > th dose independent rect. 19 4
493 732.69 radiation 20.0 14400 < th dose dependent rect. 16 13
496 732.76 wind 3.0 43200 > th dose dependent rect. 9 2
497 732.76 radiation 40.0 14400 < th dose dependent rect. 16 7
505 732.84 humidity 70.0 14400 > th dose independent rect. 19 12
506 732.84 radiation 40.0 14400 < th dose dependent rect. 16 5
526 732.98 temperature 25.0 14400 < th dose independent sin 11 NA
534 733.02 humidity 70.0 14400 > th dose independent rect. 19 8
542 733.08 temperature 25.0 14400 < th dose independent rect. 20 1
567 733.47 wind 9.0 43200 < th dose independent rect. 20 10
588 733.84 temperature 25.0 1440 > th dose dependent sin 7 NA
592 733.91 wind 7.0 43200 < th dose dependent rect. 8 1
608 734.06 radiation 20.0 1440 < th dose independent rect. 16 1
640 734.74 precipitation 0.1 43200 > th dose dependent sin 20 NA
688 735.32 temperature 25.0 1440 > th dose dependent rect. 7 7
693 735.39 radiation 20.0 1440 > th dose independent rect. 16 1
737 735.77 radiation 30.0 14400 < th dose independent rect. 15 17
758 736.05 temperature 30.0 1440 > th dose independent rect. 11 3
799 736.54 temperature 30.0 1440 > th dose independent rect. 13 1
803 736.60 temperature 30.0 1440 < th dose independent rect. 11 3
805 736.63 temperature 25.0 14400 > th dose independent rect. 4 4
811 736.66 temperature 25.0 720 > th dose dependent rect. 16 9
832 736.95 radiation 10.0 14400 > th dose independent rect. 16 1
845 737.06 temperature 25.0 1440 > th dose dependent rect. 7 18
970 738.38 radiation 10.0 14400 > th dose independent rect. 16 14
996 738.58 temperature 25.0 1440 > th dose dependent no NA NA