Os03g0327700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0327700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 69.33 | 0.391 | 11.6 | 0.404 | 1.3 | -0.789 | 1.45 | 0.288 | 0.588 | 16.3 | 24.37 | 1618 | -- | -- |
| 69.42 | 0.388 | 11.6 | 0.521 | 1.33 | -0.685 | 1.52 | -- | 0.621 | 16.2 | 23.8 | 1472 | -- | -- |
| 75.14 | 0.404 | 11.6 | 0.414 | 1.31 | -0.787 | -- | 0.283 | 0.594 | 16.3 | 24.4 | 1618 | -- | -- |
| 75.3 | 0.404 | 11.6 | 0.491 | 1.3 | -0.758 | -- | -- | 0.638 | 16.2 | 24.3 | 1628 | -- | -- |
| 128.6 | 0.531 | 11.6 | 0.733 | -- | -0.766 | -- | -0.455 | 0.572 | -- | 25.3 | 1794 | -- | -- |
| 89.81 | 0.444 | 11.5 | 0.797 | 1.31 | -- | 1.44 | -- | 0.921 | 16.3 | -- | -- | -- | -- |
| 95.53 | 0.458 | 11.5 | 0.811 | 1.32 | -- | -- | -- | 0.929 | 16.3 | -- | -- | -- | -- |
| 129.59 | 0.533 | 11.6 | 0.609 | -- | -0.779 | -- | -- | 0.533 | -- | 25.3 | 1794 | -- | -- |
| 81.84 | 0.421 | 11.6 | -- | 1.31 | -0.838 | -- | -- | 0.539 | 16.3 | 24.38 | 1657 | -- | -- |
| 189.31 | 0.643 | 11.5 | 0.758 | -- | -- | -- | -- | 0.894 | -- | -- | -- | -- | -- |
| 112.84 | 0.497 | 11.5 | -- | 1.3 | -- | -- | -- | 0.838 | 16.3 | -- | -- | -- | -- |
| 139.28 | 0.551 | 11.6 | -- | -- | -0.81 | -- | -- | 0.451 | -- | 25.3 | 1794 | -- | -- |
| 204.47 | 0.667 | 11.5 | -- | -- | -- | -- | -- | 0.81 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 67.54 | temperature | 30 | 270 | < th | dose dependent | rect. | 23 | 22 |
| 2 | 67.56 | temperature | 15 | 90 | > th | dose dependent | rect. | 5 | 23 |
| 6 | 67.95 | temperature | 15 | 270 | > th | dose dependent | rect. | 5 | 20 |
| 15 | 68.73 | temperature | 25 | 1440 | > th | dose independent | rect. | 10 | 10 |
| 22 | 68.87 | temperature | 25 | 1440 | > th | dose independent | rect. | 10 | 3 |
| 24 | 68.88 | temperature | 25 | 1440 | < th | dose independent | rect. | 10 | 12 |
| 30 | 69.02 | temperature | 25 | 720 | < th | dose dependent | rect. | 4 | 17 |
| 44 | 69.15 | temperature | 30 | 270 | < th | dose dependent | rect. | 1 | 16 |
| 81 | 69.50 | temperature | 25 | 1440 | > th | dose independent | sin | 21 | NA |
| 84 | 69.52 | temperature | 25 | 720 | < th | dose dependent | sin | 0 | NA |
| 91 | 69.58 | temperature | 25 | 1440 | < th | dose independent | sin | 21 | NA |
| 129 | 69.78 | temperature | 20 | 270 | > th | dose dependent | rect. | 17 | 22 |
| 130 | 69.79 | temperature | 25 | 1440 | < th | dose independent | rect. | 15 | 4 |
| 132 | 69.80 | temperature | 25 | 1440 | > th | dose independent | rect. | 14 | 5 |
| 167 | 70.05 | temperature | 25 | 1440 | < th | dose independent | rect. | 10 | 3 |
| 170 | 70.05 | temperature | 10 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 194 | 70.19 | temperature | 25 | 1440 | > th | dose independent | rect. | 5 | 14 |
| 200 | 70.22 | temperature | 25 | 1440 | < th | dose independent | rect. | 5 | 17 |
| 212 | 70.30 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 23 |
| 224 | 70.37 | temperature | 25 | 1440 | > th | dose independent | rect. | 5 | 17 |
| 246 | 70.49 | temperature | 25 | 1440 | < th | dose dependent | rect. | 9 | 17 |
| 255 | 70.51 | temperature | 25 | 1440 | < th | dose dependent | rect. | 9 | 21 |
| 263 | 70.55 | temperature | 25 | 1440 | < th | dose dependent | rect. | 19 | 5 |
| 283 | 70.58 | temperature | 25 | 1440 | < th | dose dependent | sin | 16 | NA |
| 307 | 70.62 | temperature | 25 | 1440 | < th | dose dependent | rect. | 15 | 10 |
| 312 | 70.63 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 2 |
| 364 | 70.70 | temperature | 25 | 1440 | < th | dose dependent | rect. | 13 | 23 |
| 365 | 70.70 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 23 |
| 366 | 70.71 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 425 | 70.77 | temperature | 25 | 1440 | < th | dose dependent | rect. | 13 | 17 |
| 447 | 70.80 | humidity | 60 | 43200 | > th | dose independent | rect. | 8 | 2 |
| 450 | 70.80 | temperature | 30 | 90 | < th | dose dependent | rect. | 13 | 23 |
| 451 | 70.81 | humidity | 60 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 542 | 70.93 | humidity | 60 | 43200 | < th | dose independent | rect. | 23 | 12 |
| 555 | 70.95 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 561 | 70.97 | humidity | 60 | 43200 | < th | dose independent | rect. | 1 | 10 |
| 574 | 70.98 | temperature | 20 | 270 | > th | dose dependent | sin | 6 | NA |
| 575 | 70.98 | temperature | 30 | 90 | < th | dose dependent | no | NA | NA |
| 606 | 71.02 | humidity | 60 | 43200 | < th | dose dependent | rect. | 10 | 2 |
| 651 | 71.09 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 20 |
| 678 | 71.15 | humidity | 60 | 43200 | > th | dose independent | rect. | 6 | 4 |
| 687 | 71.16 | temperature | 25 | 1440 | < th | dose independent | rect. | 8 | 6 |
| 711 | 71.19 | temperature | 30 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 712 | 71.20 | humidity | 60 | 43200 | < th | dose independent | rect. | 8 | 3 |
| 764 | 71.28 | humidity | 60 | 43200 | < th | dose dependent | rect. | 5 | 7 |
| 776 | 71.29 | temperature | 30 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 789 | 71.31 | humidity | 60 | 43200 | < th | dose dependent | rect. | 23 | 13 |
| 838 | 71.38 | temperature | 30 | 10 | < th | dose dependent | no | NA | NA |
| 848 | 71.39 | temperature | 10 | 720 | > th | dose dependent | rect. | 20 | 21 |
| 877 | 71.43 | humidity | 60 | 43200 | < th | dose dependent | rect. | 19 | 18 |
| 890 | 71.45 | temperature | 30 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 909 | 71.48 | wind | 7 | 43200 | > th | dose dependent | rect. | 15 | 1 |
| 934 | 71.51 | temperature | 30 | 270 | < th | dose dependent | sin | 5 | NA |
| 971 | 71.55 | temperature | 30 | 10 | < th | dose dependent | rect. | 19 | 23 |