Os03g0327100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to CUC1.
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Os03g0327100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to CUC1.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 143.71 | 0.563 | 9.01 | 1.83 | 1.51 | 2.52 | 1.71 | 0.425 | 0.633 | 17 | 28.33 | 6681 | -- | -- |
| 143.83 | 0.559 | 9 | 1.91 | 1.52 | 2.46 | 1.71 | -- | 0.645 | 17 | 28.67 | 6636 | -- | -- |
| 150.94 | 0.572 | 9.01 | 1.82 | 1.53 | 2.51 | -- | 0.454 | 0.631 | 16.8 | 28.49 | 6602 | -- | -- |
| 151.02 | 0.572 | 8.98 | 1.96 | 1.54 | 2.46 | -- | -- | 0.7 | 16.7 | 29.2 | 7553 | -- | -- |
| 268.64 | 0.763 | 9 | 1.77 | -- | 2.68 | -- | 0.831 | 0.635 | -- | 29.3 | 6988 | -- | -- |
| 236.96 | 0.722 | 9.14 | 0.652 | 1.57 | -- | 1.63 | -- | 0.0127 | 16.7 | -- | -- | -- | -- |
| 243.76 | 0.731 | 9.14 | 0.661 | 1.58 | -- | -- | -- | 0.0212 | 16.6 | -- | -- | -- | -- |
| 269.18 | 0.764 | 8.97 | 1.92 | -- | 2.58 | -- | -- | 0.668 | -- | 29.8 | 6988 | -- | -- |
| 206.91 | 0.67 | 9.1 | -- | 1.48 | 1.57 | -- | -- | 0.18 | 16.7 | 63.26 | 1413 | -- | -- |
| 376.5 | 0.907 | 9.12 | 0.6 | -- | -- | -- | -- | -0.0203 | -- | -- | -- | -- | -- |
| 255.28 | 0.747 | 9.15 | -- | 1.57 | -- | -- | -- | -0.0524 | 16.6 | -- | -- | -- | -- |
| 315.13 | 0.827 | 9.08 | -- | -- | 1.9 | -- | -- | 0.175 | -- | 64.72 | 1258 | -- | -- |
| 386 | 0.917 | 9.14 | -- | -- | -- | -- | -- | -0.0868 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 136.35 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 2 | 136.76 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 2 |
| 4 | 136.97 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 2 |
| 5 | 136.97 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 2 |
| 6 | 137.06 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 20 | 2 |
| 9 | 138.26 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 16 | 3 |
| 10 | 138.29 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 21 | 1 |
| 12 | 138.49 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 18 | 4 |
| 16 | 138.72 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 24 | 139.03 | temperature | 15.0 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 25 | 139.03 | temperature | 25.0 | 14400 | < th | dose dependent | rect. | 5 | 1 |
| 79 | 139.67 | temperature | 15.0 | 14400 | > th | dose dependent | rect. | 20 | 11 |
| 109 | 139.79 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 21 | 10 |
| 220 | 140.13 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 17 | 2 |
| 242 | 140.19 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 17 | 2 |
| 344 | 140.52 | temperature | 15.0 | 14400 | > th | dose dependent | sin | 10 | NA |
| 403 | 140.75 | temperature | 30.0 | 14400 | < th | dose dependent | sin | 10 | NA |
| 409 | 140.78 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 16 | 5 |
| 421 | 140.83 | temperature | 20.0 | 14400 | > th | dose dependent | rect. | 20 | 1 |
| 458 | 140.99 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 16 | 6 |
| 475 | 141.06 | temperature | 20.0 | 14400 | > th | dose dependent | rect. | 18 | 4 |