Os03g0320800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein kinase domain containing protein.
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Os03g0320800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein kinase domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 139.01 | 0.554 | 3.08 | -0.639 | 0.149 | -0.621 | -0.596 | 1.84 | -0.0886 | 2.27 | 1.013 | 2 | -- | -- |
| 142.63 | 0.556 | 3.07 | -0.559 | 0.162 | -0.491 | -0.869 | -- | -0.0724 | 2.55 | 1.01 | 2 | -- | -- |
| 139.57 | 0.554 | 3.08 | -0.612 | 0.167 | -0.591 | -- | 2.1 | -0.0893 | 1.66 | 1.013 | 2 | -- | -- |
| 145.26 | 0.561 | 3.06 | -0.535 | 0.163 | -0.479 | -- | -- | -0.0671 | 1.81 | 1.034 | 2 | -- | -- |
| 141.16 | 0.556 | 3.08 | -0.613 | -- | -0.65 | -- | 2.14 | -0.0856 | -- | 1.013 | 2 | -- | -- |
| 150.07 | 0.574 | 3.07 | -0.503 | 0.299 | -- | -0.798 | -- | -0.0814 | 2.91 | -- | -- | -- | -- |
| 152.23 | 0.578 | 3.06 | -0.485 | 0.296 | -- | -- | -- | -0.0767 | 2.92 | -- | -- | -- | -- |
| 146.71 | 0.564 | 3.06 | -0.536 | -- | -0.546 | -- | -- | -0.0625 | -- | 1.067 | 2 | -- | -- |
| 152.73 | 0.576 | 3.05 | -- | 0.165 | -0.431 | -- | -- | -0.00907 | 1.93 | 1.059 | 2 | -- | -- |
| 157.27 | 0.586 | 3.06 | -0.472 | -- | -- | -- | -- | -0.0691 | -- | -- | -- | -- | -- |
| 158.42 | 0.589 | 3.05 | -- | 0.286 | -- | -- | -- | -0.0227 | 2.91 | -- | -- | -- | -- |
| 154.21 | 0.578 | 3.05 | -- | -- | -0.5 | -- | -- | -0.00437 | -- | 1.099 | 2 | -- | -- |
| 163.15 | 0.596 | 3.05 | -- | -- | -- | -- | -- | -0.0167 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 136.19 | temperature | 25.0 | 10 | < th | dose independent | rect. | 2 | 7 |
| 5 | 138.50 | temperature | 25.0 | 270 | < th | dose independent | rect. | 18 | 8 |
| 6 | 138.77 | radiation | 1.0 | 270 | > th | dose independent | rect. | 4 | 1 |
| 16 | 138.77 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 4 | 1 |
| 41 | 139.60 | temperature | 15.0 | 30 | > th | dose independent | rect. | 23 | 3 |
| 42 | 139.71 | humidity | 90.0 | 270 | < th | dose dependent | rect. | 4 | 2 |
| 44 | 139.74 | wind | 1.0 | 10 | > th | dose independent | rect. | 23 | 13 |
| 46 | 139.78 | humidity | 80.0 | 270 | < th | dose independent | rect. | 5 | 1 |
| 64 | 139.80 | temperature | 25.0 | 270 | < th | dose independent | rect. | 23 | 1 |
| 65 | 139.82 | wind | 1.0 | 10 | > th | dose independent | rect. | 23 | 15 |
| 66 | 139.85 | temperature | 25.0 | 30 | < th | dose independent | rect. | 23 | 3 |
| 71 | 139.97 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 80 | 140.25 | wind | 1.0 | 10 | > th | dose independent | rect. | 8 | 23 |
| 87 | 140.50 | wind | 5.0 | 10 | < th | dose dependent | rect. | 2 | 7 |
| 90 | 140.52 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 2 | 7 |
| 94 | 140.74 | wind | 1.0 | 10 | > th | dose independent | rect. | 23 | 6 |
| 111 | 141.02 | humidity | 70.0 | 90 | < th | dose independent | rect. | 19 | 13 |
| 112 | 141.02 | humidity | 70.0 | 90 | < th | dose dependent | rect. | 19 | 13 |
| 117 | 141.07 | temperature | 15.0 | 30 | > th | dose independent | rect. | 9 | 17 |
| 131 | 141.14 | wind | 1.0 | 10 | > th | dose independent | rect. | 9 | 20 |
| 132 | 141.17 | wind | 1.0 | 10 | < th | dose independent | rect. | 2 | 21 |
| 137 | 141.19 | humidity | 80.0 | 10 | < th | dose dependent | rect. | 23 | 9 |
| 140 | 141.20 | humidity | 80.0 | 10 | < th | dose dependent | rect. | 1 | 7 |
| 143 | 141.21 | radiation | 30.0 | 30 | > th | dose dependent | rect. | 7 | 2 |
| 146 | 141.21 | humidity | 80.0 | 10 | < th | dose dependent | rect. | 3 | 5 |
| 160 | 141.21 | radiation | 1.0 | 30 | > th | dose dependent | rect. | 17 | 15 |
| 164 | 141.22 | temperature | 25.0 | 270 | > th | dose independent | rect. | 14 | 13 |
| 231 | 141.23 | humidity | 70.0 | 10 | < th | dose independent | rect. | 7 | 1 |
| 234 | 141.23 | radiation | 20.0 | 90 | > th | dose independent | rect. | 6 | 1 |
| 306 | 141.23 | humidity | 70.0 | 10 | < th | dose dependent | rect. | 7 | 1 |
| 459 | 141.30 | humidity | 70.0 | 10 | < th | dose dependent | rect. | 16 | 17 |
| 483 | 141.33 | humidity | 70.0 | 90 | < th | dose independent | rect. | 16 | 16 |
| 517 | 141.44 | wind | 1.0 | 10 | < th | dose independent | rect. | 2 | 4 |
| 522 | 141.44 | wind | 5.0 | 30 | < th | dose independent | rect. | 2 | 7 |
| 605 | 141.59 | humidity | 70.0 | 10 | < th | dose independent | rect. | 16 | 17 |
| 607 | 141.60 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 24 | 8 |
| 642 | 141.63 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 2 | 6 |
| 647 | 141.66 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 24 | 3 |
| 650 | 141.66 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 24 | 3 |
| 654 | 141.66 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 24 | 3 |
| 664 | 141.66 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 24 | 3 |
| 665 | 141.66 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 24 | 3 |
| 686 | 141.66 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 3 | 21 |
| 689 | 141.66 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 2 | 21 |
| 690 | 141.66 | wind | 1.0 | 10 | > th | dose independent | rect. | 6 | 23 |
| 692 | 141.66 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 24 | 3 |
| 721 | 141.70 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 2 | 21 |
| 723 | 141.70 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 2 | 21 |
| 732 | 141.73 | humidity | 50.0 | 30 | > th | dose independent | rect. | 23 | 3 |
| 735 | 141.73 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 23 | 3 |
| 736 | 141.73 | radiation | 1.0 | 30 | < th | dose independent | rect. | 23 | 3 |
| 741 | 141.73 | temperature | 10.0 | 30 | > th | dose independent | rect. | 2 | 21 |
| 743 | 141.73 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 2 | 21 |
| 745 | 141.73 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 23 | 3 |
| 753 | 141.75 | wind | 9.0 | 30 | < th | dose independent | rect. | 23 | 3 |
| 756 | 141.76 | temperature | 25.0 | 270 | > th | dose independent | sin | 15 | NA |
| 757 | 141.76 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 23 | 3 |
| 760 | 141.76 | temperature | 20.0 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 763 | 141.76 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 23 | 3 |
| 769 | 141.78 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 2 | 7 |
| 784 | 141.84 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 23 | 3 |
| 826 | 141.89 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 2 | 7 |
| 828 | 141.90 | temperature | 25.0 | 270 | < th | dose independent | rect. | 8 | 18 |
| 838 | 141.92 | wind | 9.0 | 30 | < th | dose independent | rect. | 2 | 21 |
| 860 | 141.95 | wind | 3.0 | 10 | < th | dose dependent | rect. | 2 | 21 |
| 862 | 141.96 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 1 | 7 |
| 874 | 141.99 | wind | 9.0 | 30 | < th | dose dependent | rect. | 23 | 3 |
| 896 | 142.03 | wind | 9.0 | 30 | < th | dose dependent | rect. | 2 | 21 |
| 919 | 142.10 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 2 | 7 |
| 927 | 142.14 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 952 | 142.24 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 3 | 7 |
| 955 | 142.24 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 3 | 7 |
| 965 | 142.24 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 10 | 17 |
| 969 | 142.25 | wind | 3.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 971 | 142.25 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 23 | 3 |
| 989 | 142.28 | wind | 1.0 | 10 | > th | dose independent | sin | 5 | NA |
| 991 | 142.28 | temperature | 10.0 | 30 | > th | dose independent | rect. | 2 | 7 |
| 994 | 142.28 | humidity | 50.0 | 30 | > th | dose independent | rect. | 2 | 7 |
| 998 | 142.28 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 2 | 7 |