Os03g0317300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Peptidase A1, pepsin family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os03g0317300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Peptidase A1, pepsin family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 97.92 | 0.465 | 8.85 | 0.447 | 1.42 | 1.12 | 1.21 | 0.782 | 0.723 | 22.1 | 81.32 | 83 | -- | -- |
| 99.48 | 0.465 | 8.86 | 0.491 | 1.44 | 1.1 | 1.52 | -- | 0.731 | 22.3 | 82.22 | 66 | -- | -- |
| 102.31 | 0.471 | 8.85 | 0.368 | 1.38 | 1.12 | -- | 1.27 | 0.72 | 22.2 | 81.58 | 63 | -- | -- |
| 108.02 | 0.484 | 8.85 | 0.421 | 1.42 | 1.16 | -- | -- | 0.75 | 22.2 | 82.64 | 67 | -- | -- |
| 180.34 | 0.625 | 8.83 | 0.462 | -- | 1.53 | -- | 1.62 | 0.656 | -- | 69.13 | 2 | -- | -- |
| 133.95 | 0.543 | 8.89 | 0.604 | 1.78 | -- | 1.72 | -- | 0.559 | 23.9 | -- | -- | -- | -- |
| 146.74 | 0.567 | 8.89 | 0.534 | 1.78 | -- | -- | -- | 0.551 | 23.9 | -- | -- | -- | -- |
| 188.27 | 0.639 | 8.83 | 0.526 | -- | 1.6 | -- | -- | 0.695 | -- | 69 | 2 | -- | -- |
| 112.53 | 0.494 | 8.86 | -- | 1.44 | 1.19 | -- | -- | 0.731 | 22.3 | 83.64 | 64 | -- | -- |
| 345.62 | 0.869 | 8.86 | 0.588 | -- | -- | -- | -- | 0.574 | -- | -- | -- | -- | -- |
| 154.27 | 0.581 | 8.91 | -- | 1.78 | -- | -- | -- | 0.491 | 23.9 | -- | -- | -- | -- |
| 195.53 | 0.651 | 8.84 | -- | -- | 1.6 | -- | -- | 0.64 | -- | 69.44 | 2 | -- | -- |
| 354.75 | 0.879 | 8.87 | -- | -- | -- | -- | -- | 0.509 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 92.99 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 1 | 22 |
| 3 | 94.02 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 1 | 20 |
| 5 | 94.27 | humidity | 70.0 | 10 | > th | dose dependent | sin | 5 | NA |
| 8 | 94.71 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 1 | 18 |
| 42 | 96.52 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 11 | 21 |
| 54 | 96.83 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 2 | 17 |
| 63 | 97.00 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 13 | 19 |
| 69 | 97.08 | radiation | 20.0 | 90 | < th | dose dependent | sin | 4 | NA |
| 99 | 97.58 | humidity | 90.0 | 90 | > th | dose independent | rect. | 1 | 22 |
| 157 | 98.46 | radiation | 20.0 | 90 | < th | dose dependent | rect. | 3 | 14 |
| 160 | 98.47 | humidity | 60.0 | 270 | > th | dose dependent | rect. | 13 | 17 |
| 178 | 98.65 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 19 | 23 |
| 179 | 98.67 | humidity | 80.0 | 90 | > th | dose dependent | no | NA | NA |
| 192 | 98.77 | humidity | 90.0 | 30 | < th | dose independent | rect. | 21 | 17 |
| 204 | 98.82 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 17 | 23 |
| 219 | 98.99 | humidity | 90.0 | 90 | < th | dose independent | rect. | 19 | 20 |
| 221 | 99.01 | humidity | 90.0 | 90 | > th | dose independent | rect. | 1 | 20 |
| 258 | 99.40 | humidity | 80.0 | 30 | > th | dose dependent | rect. | 15 | 23 |
| 280 | 99.57 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 7 | 23 |
| 285 | 99.59 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 21 | 23 |
| 316 | 99.88 | radiation | 10.0 | 90 | < th | dose independent | rect. | 2 | 15 |
| 345 | 100.12 | humidity | 90.0 | 30 | < th | dose independent | sin | 3 | NA |
| 363 | 100.23 | humidity | 70.0 | 270 | > th | dose dependent | rect. | 23 | 7 |
| 366 | 100.25 | humidity | 90.0 | 90 | > th | dose independent | rect. | 1 | 18 |
| 376 | 100.31 | humidity | 90.0 | 90 | < th | dose independent | rect. | 19 | 16 |
| 383 | 100.35 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 1 | 8 |
| 396 | 100.41 | humidity | 90.0 | 270 | < th | dose independent | rect. | 17 | 18 |
| 458 | 100.72 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 1 | 10 |
| 518 | 101.17 | humidity | 90.0 | 90 | > th | dose independent | rect. | 3 | 18 |
| 526 | 101.20 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 22 | 21 |
| 527 | 101.21 | humidity | 70.0 | 270 | > th | dose dependent | rect. | 17 | 13 |
| 556 | 101.39 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 23 |
| 558 | 101.39 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 23 |
| 664 | 102.03 | humidity | 90.0 | 90 | > th | dose independent | rect. | 3 | 16 |
| 677 | 102.11 | radiation | 10.0 | 90 | < th | dose independent | sin | 4 | NA |
| 709 | 102.29 | radiation | 10.0 | 90 | > th | dose independent | sin | 4 | NA |
| 711 | 102.29 | humidity | 90.0 | 90 | < th | dose independent | rect. | 6 | 23 |
| 724 | 102.33 | wind | 9.0 | 270 | < th | dose dependent | rect. | 5 | 8 |
| 734 | 102.37 | humidity | 90.0 | 10 | < th | dose dependent | sin | 7 | NA |
| 735 | 102.38 | humidity | 80.0 | 30 | > th | dose dependent | rect. | 3 | 23 |
| 767 | 102.49 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 5 | 20 |
| 769 | 102.49 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 5 | 20 |
| 804 | 102.64 | humidity | 70.0 | 270 | > th | dose dependent | rect. | 1 | 4 |
| 828 | 102.72 | radiation | 1.0 | 270 | > th | dose independent | rect. | 17 | 21 |
| 900 | 102.99 | humidity | 90.0 | 90 | < th | dose independent | rect. | 3 | 23 |
| 915 | 103.05 | humidity | 90.0 | 30 | < th | dose independent | rect. | 1 | 13 |
| 936 | 103.13 | wind | 5.0 | 270 | < th | dose independent | rect. | 5 | 8 |
| 969 | 103.22 | humidity | 90.0 | 90 | > th | dose independent | sin | 6 | NA |
| 970 | 103.22 | humidity | 90.0 | 90 | < th | dose independent | no | NA | NA |
| 975 | 103.23 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 17 |
| 978 | 103.23 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 17 |