Os03g0313800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os03g0313800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 165.19 | 0.604 | 5.4 | 0.704 | 3.31 | 1.84 | -0.926 | -0.491 | 0.0688 | 11 | 1.148 | 216 | 4.1 | 9.43 |
| 165.41 | 0.599 | 5.4 | 0.707 | 3.31 | 1.88 | -0.999 | -- | 0.0648 | 10.9 | 1.123 | 212 | 4.12 | 9.57 |
| 168.56 | 0.605 | 5.4 | 0.681 | 3.3 | 1.86 | -- | -0.958 | 0.0672 | 10.9 | 1.142 | 215 | 4.08 | 9.6 |
| 169.29 | 0.606 | 5.41 | 0.654 | 3.31 | 2.09 | -- | -- | 0.0451 | 10.9 | 0.7032 | 209 | 4.2 | 9.5 |
| 202.51 | 0.663 | 5.47 | 0.389 | -- | 3.51 | -- | -0.499 | 0.107 | -- | 22.09 | 755 | 2.21 | 5.3 |
| 197.85 | 0.659 | 5.38 | 0.618 | 3.58 | -- | -1.24 | -- | 0.0848 | 10.4 | -- | -- | -- | -- |
| 204.1 | 0.669 | 5.39 | 0.568 | 3.59 | -- | -- | -- | 0.0814 | 10.4 | -- | -- | -- | -- |
| 191.65 | 0.645 | 5.49 | 0.549 | -- | 3.28 | -- | -- | 0.0133 | -- | 61.2 | 802 | 1.12 | 5.9 |
| 181.19 | 0.627 | 5.42 | -- | 3.31 | 1.98 | -- | -- | -0.0185 | 10.9 | 0.9779 | 204 | 4.2 | 9.1 |
| 990.17 | 1.47 | 5.48 | 0.509 | -- | -- | -- | -- | 0.0691 | -- | -- | -- | -- | -- |
| 212.61 | 0.682 | 5.4 | -- | 3.58 | -- | -- | -- | 0.0181 | 10.4 | -- | -- | -- | -- |
| 198.97 | 0.657 | 5.5 | -- | -- | 3.31 | -- | -- | -0.036 | -- | 38.25 | 805 | 1.07 | 5.94 |
| 997.02 | 1.47 | 5.49 | -- | -- | -- | -- | -- | 0.0126 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 168.01 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 4 | 9 |
| 8 | 169.21 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 7 | 4 |
| 12 | 169.54 | radiation | 1.0 | 270 | < th | dose independent | rect. | 3 | 11 |
| 17 | 169.89 | humidity | 90.0 | 270 | < th | dose independent | rect. | 7 | 4 |
| 22 | 170.13 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 8 | 6 |
| 28 | 170.43 | humidity | 90.0 | 270 | < th | dose independent | rect. | 23 | 13 |
| 49 | 171.52 | temperature | 20.0 | 270 | > th | dose independent | rect. | 7 | 4 |
| 50 | 171.62 | humidity | 90.0 | 10 | < th | dose independent | rect. | 8 | 6 |
| 51 | 171.70 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 4 | 9 |
| 61 | 172.06 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 4 | 11 |
| 69 | 172.17 | temperature | 15.0 | 90 | > th | dose independent | rect. | 8 | 20 |
| 92 | 173.17 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 22 | 14 |
| 95 | 173.22 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 8 | 6 |
| 98 | 173.26 | temperature | 15.0 | 270 | > th | dose independent | rect. | 6 | 21 |
| 120 | 173.63 | radiation | 30.0 | 90 | < th | dose dependent | rect. | 4 | 4 |
| 128 | 173.74 | humidity | 90.0 | 270 | < th | dose independent | sin | 5 | NA |
| 131 | 173.79 | radiation | 10.0 | 270 | > th | dose independent | rect. | 6 | 6 |
| 145 | 173.80 | humidity | 90.0 | 90 | < th | dose dependent | rect. | 7 | 6 |
| 146 | 173.80 | humidity | 80.0 | 270 | > th | dose dependent | rect. | 2 | 12 |
| 155 | 173.91 | wind | 7.0 | 10 | < th | dose independent | rect. | 8 | 6 |
| 156 | 173.93 | radiation | 10.0 | 270 | > th | dose independent | rect. | 7 | 4 |
| 160 | 173.98 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 5 | 7 |
| 174 | 174.12 | wind | 7.0 | 90 | < th | dose independent | rect. | 8 | 20 |
| 192 | 174.16 | radiation | 20.0 | 90 | < th | dose independent | rect. | 4 | 4 |
| 218 | 174.42 | humidity | 80.0 | 90 | > th | dose independent | rect. | 4 | 9 |
| 221 | 174.42 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 4 | 7 |
| 226 | 174.51 | temperature | 25.0 | 10 | > th | dose independent | rect. | 8 | 6 |
| 234 | 174.62 | humidity | 80.0 | 90 | > th | dose independent | rect. | 4 | 11 |
| 238 | 174.67 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 8 | 20 |
| 240 | 174.67 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 8 | 20 |
| 254 | 174.83 | wind | 5.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 262 | 174.88 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 4 | 4 |
| 273 | 174.97 | radiation | 10.0 | 270 | > th | dose independent | sin | 8 | NA |
| 277 | 175.00 | wind | 9.0 | 1440 | < th | dose independent | rect. | 5 | 4 |
| 278 | 175.00 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 5 | 4 |
| 281 | 175.00 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 5 | 4 |
| 283 | 175.00 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 5 | 4 |
| 284 | 175.00 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 5 | 4 |
| 285 | 175.00 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 9 | 20 |
| 292 | 175.02 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 5 | 11 |
| 304 | 175.09 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 21 |
| 307 | 175.09 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 21 |
| 310 | 175.12 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 4 | 12 |
| 344 | 175.38 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 8 | 20 |
| 355 | 175.44 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 4 | 4 |
| 364 | 175.49 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 1 | 12 |
| 384 | 175.62 | humidity | 70.0 | 90 | > th | dose independent | rect. | 4 | 4 |
| 391 | 175.66 | humidity | 90.0 | 90 | < th | dose dependent | rect. | 2 | 11 |
| 402 | 175.74 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 5 | 23 |
| 403 | 175.74 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 5 | 23 |
| 405 | 175.75 | temperature | 10.0 | 90 | > th | dose independent | rect. | 4 | 4 |
| 407 | 175.75 | temperature | 30.0 | 90 | < th | dose independent | rect. | 4 | 4 |
| 408 | 175.75 | humidity | 50.0 | 90 | > th | dose independent | rect. | 4 | 4 |
| 410 | 175.75 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 4 | 4 |
| 418 | 175.78 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 4 | 4 |
| 419 | 175.78 | humidity | 70.0 | 90 | > th | dose dependent | sin | 3 | NA |
| 421 | 175.78 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 4 | 4 |
| 433 | 175.85 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 4 | 4 |
| 440 | 175.90 | wind | 9.0 | 90 | < th | dose dependent | rect. | 8 | 20 |
| 464 | 175.97 | radiation | 1.0 | 270 | < th | dose independent | sin | 3 | NA |
| 471 | 175.99 | radiation | 1.0 | 270 | > th | dose independent | sin | 3 | NA |
| 483 | 176.03 | humidity | 90.0 | 270 | > th | dose independent | rect. | 2 | 12 |
| 508 | 176.16 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 4 | 9 |
| 514 | 176.18 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 8 | 21 |
| 517 | 176.18 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 8 | 21 |
| 530 | 176.27 | wind | 7.0 | 10 | < th | dose independent | rect. | 8 | 21 |
| 596 | 176.51 | wind | 9.0 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 613 | 176.59 | radiation | 1.0 | 270 | < th | dose dependent | sin | 3 | NA |
| 639 | 176.70 | wind | 5.0 | 270 | < th | dose independent | rect. | 4 | 1 |
| 724 | 176.88 | radiation | 20.0 | 10 | < th | dose independent | rect. | 5 | 3 |
| 808 | 177.17 | wind | 1.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 819 | 177.19 | temperature | 10.0 | 270 | > th | dose independent | rect. | 4 | 1 |
| 821 | 177.19 | temperature | 30.0 | 270 | < th | dose independent | rect. | 4 | 1 |
| 822 | 177.19 | humidity | 50.0 | 270 | > th | dose independent | rect. | 4 | 1 |
| 825 | 177.19 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 4 | 1 |
| 826 | 177.19 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 4 | 1 |
| 828 | 177.19 | radiation | 20.0 | 270 | < th | dose independent | rect. | 4 | 1 |
| 850 | 177.23 | radiation | 1.0 | 270 | < th | dose independent | rect. | 4 | 1 |
| 856 | 177.24 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 8 | 20 |
| 868 | 177.26 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 22 | 16 |
| 911 | 177.36 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 4 | 4 |
| 913 | 177.36 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 2 | 13 |
| 920 | 177.38 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 2 | 5 |
| 956 | 177.47 | humidity | 90.0 | 270 | > th | dose independent | sin | 5 | NA |
| 957 | 177.47 | wind | 7.0 | 270 | < th | dose independent | rect. | 6 | 7 |
| 960 | 177.48 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 4 | 1 |
| 962 | 177.48 | radiation | 1.0 | 10 | > th | dose independent | rect. | 8 | 6 |
| 963 | 177.48 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 4 | 1 |