Os03g0310600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF247, plant family protein.
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Os03g0310600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF247, plant family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 227.77 | 0.709 | 7.92 | 1.61 | 0.826 | -2.15 | -0.326 | 1.85 | -0.106 | 3.26 | 30.15 | 1160 | -- | -- |
| 227.86 | 0.703 | 7.94 | 1.35 | 0.843 | -1.96 | -0.3 | -- | -0.00704 | 3.18 | 29.01 | 1183 | -- | -- |
| 228.06 | 0.703 | 7.92 | 1.6 | 0.827 | -2.15 | -- | 1.76 | -0.106 | 3.21 | 30.32 | 1151 | -- | -- |
| 228.13 | 0.703 | 7.93 | 1.36 | 0.839 | -1.98 | -- | -- | 0.000204 | 3.13 | 28.96 | 1182 | -- | -- |
| 263.78 | 0.756 | 7.9 | 1.65 | -- | -2.24 | -- | 2.44 | -0.0474 | -- | 30.64 | 1013 | -- | -- |
| 403.69 | 0.942 | 7.87 | 0.82 | 0.599 | -- | -0.954 | -- | 0.254 | 4.32 | -- | -- | -- | -- |
| 406.19 | 0.944 | 7.87 | 0.829 | 0.593 | -- | -- | -- | 0.259 | 4.32 | -- | -- | -- | -- |
| 263.93 | 0.757 | 7.95 | 1.29 | -- | -1.96 | -- | -- | -0.0457 | -- | 30.85 | 1013 | -- | -- |
| 271.51 | 0.767 | 7.96 | -- | 0.777 | -1.8 | -- | -- | -0.196 | 2.92 | 31.24 | 1113 | -- | -- |
| 425.1 | 0.963 | 7.87 | 0.853 | -- | -- | -- | -- | 0.275 | -- | -- | -- | -- | -- |
| 424.31 | 0.964 | 7.89 | -- | 0.608 | -- | -- | -- | 0.167 | 4.29 | -- | -- | -- | -- |
| 306.01 | 0.815 | 7.97 | -- | -- | -1.85 | -- | -- | -0.146 | -- | 31.4 | 967 | -- | -- |
| 444.27 | 0.984 | 7.89 | -- | -- | -- | -- | -- | 0.18 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 231.96 | temperature | 30 | 1440 | > th | dose dependent | rect. | 15 | 1 |
| 4 | 232.56 | temperature | 30 | 720 | < th | dose independent | rect. | 16 | 15 |
| 21 | 233.86 | temperature | 25 | 720 | > th | dose dependent | rect. | 16 | 17 |
| 42 | 235.55 | temperature | 30 | 1440 | > th | dose dependent | sin | 14 | NA |
| 44 | 235.72 | temperature | 30 | 720 | < th | dose independent | sin | 12 | NA |
| 67 | 236.50 | humidity | 70 | 720 | > th | dose independent | rect. | 17 | 14 |
| 123 | 238.34 | humidity | 70 | 720 | > th | dose independent | rect. | 17 | 6 |
| 127 | 238.55 | temperature | 30 | 720 | < th | dose independent | rect. | 16 | 7 |
| 188 | 240.51 | temperature | 30 | 1440 | > th | dose dependent | no | NA | NA |
| 306 | 241.07 | temperature | 30 | 720 | > th | dose independent | sin | 12 | NA |
| 310 | 241.25 | temperature | 30 | 720 | > th | dose independent | rect. | 16 | 3 |
| 395 | 242.72 | humidity | 70 | 720 | < th | dose independent | rect. | 16 | 4 |
| 427 | 243.27 | humidity | 80 | 720 | < th | dose dependent | rect. | 16 | 5 |
| 450 | 243.56 | humidity | 80 | 1440 | < th | dose dependent | rect. | 16 | 3 |
| 748 | 247.97 | humidity | 80 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 831 | 249.03 | humidity | 70 | 720 | < th | dose independent | sin | 12 | NA |
| 858 | 249.30 | humidity | 70 | 720 | > th | dose independent | sin | 12 | NA |
| 862 | 249.38 | temperature | 30 | 1440 | < th | dose independent | rect. | 15 | 12 |
| 867 | 249.40 | radiation | 10 | 1440 | > th | dose dependent | rect. | 16 | 15 |
| 877 | 249.50 | temperature | 30 | 1440 | < th | dose independent | rect. | 15 | 4 |
| 884 | 249.68 | humidity | 80 | 720 | < th | dose dependent | rect. | 16 | 16 |
| 900 | 249.83 | temperature | 30 | 1440 | < th | dose independent | rect. | 11 | 13 |
| 902 | 249.84 | temperature | 30 | 1440 | < th | dose independent | rect. | 11 | 16 |
| 903 | 249.84 | temperature | 30 | 1440 | < th | dose independent | rect. | 11 | 21 |
| 910 | 249.88 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 15 |
| 913 | 249.88 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 18 |
| 915 | 249.88 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 23 |
| 917 | 249.89 | temperature | 30 | 1440 | < th | dose independent | rect. | 11 | 8 |
| 925 | 249.92 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 10 |
| 951 | 250.18 | radiation | 30 | 1440 | > th | dose independent | rect. | 7 | 1 |