Os03g0310000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Lipolytic enzyme, G-D-S-L family protein.
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Os03g0310000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Lipolytic enzyme, G-D-S-L family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 269.78 | 0.772 | 6.96 | 1.59 | 1.34 | -2.15 | -1.59 | -3.6 | -0.337 | 6.46 | 27.68 | 1294 | -- | -- |
| 272.95 | 0.769 | 6.9 | 2.31 | 1.36 | -2.46 | -1.17 | -- | -0.275 | 6.42 | 28.04 | 1299 | -- | -- |
| 275.74 | 0.773 | 6.96 | 1.5 | 1.34 | -2.16 | -- | -3.93 | -0.311 | 6.36 | 27.35 | 1293 | -- | -- |
| 277.9 | 0.776 | 6.86 | 2.4 | 1.32 | -2.56 | -- | -- | -0.194 | 6.33 | 27.64 | 1293 | -- | -- |
| 347.82 | 0.869 | 6.94 | 1.63 | -- | -2.73 | -- | -4.02 | -0.134 | -- | 26.28 | 2120 | -- | -- |
| 568.34 | 1.12 | 6.83 | 1.64 | 1.25 | -- | -1.67 | -- | -0.104 | 7.3 | -- | -- | -- | -- |
| 575.64 | 1.12 | 6.83 | 1.61 | 1.25 | -- | -- | -- | -0.0989 | 7.5 | -- | -- | -- | -- |
| 348.45 | 0.869 | 6.83 | 2.51 | -- | -3.15 | -- | -- | 0.054 | -- | 26.3 | 2122 | -- | -- |
| 422.33 | 0.957 | 6.84 | -- | 1.4 | -2.13 | -- | -- | -0.297 | 6.26 | 27.81 | 1284 | -- | -- |
| 658.96 | 1.2 | 6.86 | 1.63 | -- | -- | -- | -- | -0.0793 | -- | -- | -- | -- | -- |
| 643.92 | 1.19 | 6.87 | -- | 1.26 | -- | -- | -- | -0.278 | 7.41 | -- | -- | -- | -- |
| 494.78 | 1.04 | 6.94 | -- | -- | -2.57 | -- | -- | -0.431 | -- | 27.68 | 976 | -- | -- |
| 728.92 | 1.26 | 6.9 | -- | -- | -- | -- | -- | -0.26 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 265.89 | temperature | 30 | 14400 | > th | dose dependent | rect. | 16 | 3 |
| 15 | 266.28 | temperature | 30 | 14400 | > th | dose dependent | sin | 12 | NA |
| 33 | 266.90 | temperature | 30 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 119 | 271.22 | temperature | 25 | 14400 | > th | dose dependent | rect. | 19 | 1 |
| 137 | 271.70 | temperature | 25 | 14400 | > th | dose dependent | rect. | 19 | 4 |
| 142 | 271.88 | radiation | 30 | 1440 | < th | dose dependent | rect. | 16 | 15 |
| 144 | 272.05 | temperature | 25 | 14400 | > th | dose dependent | rect. | 22 | 1 |
| 186 | 272.95 | temperature | 30 | 14400 | < th | dose independent | rect. | 16 | 11 |
| 189 | 273.00 | temperature | 30 | 14400 | < th | dose independent | rect. | 16 | 9 |
| 190 | 273.00 | temperature | 30 | 14400 | < th | dose independent | rect. | 16 | 13 |
| 195 | 273.04 | temperature | 30 | 14400 | < th | dose independent | rect. | 16 | 15 |
| 196 | 273.04 | temperature | 30 | 14400 | > th | dose dependent | no | NA | NA |
| 292 | 273.11 | temperature | 30 | 14400 | < th | dose independent | rect. | 16 | 3 |
| 294 | 273.16 | radiation | 1 | 1440 | > th | dose dependent | rect. | 16 | 15 |
| 323 | 273.67 | temperature | 30 | 14400 | > th | dose independent | rect. | 16 | 3 |
| 402 | 275.24 | temperature | 30 | 14400 | < th | dose independent | sin | 12 | NA |
| 408 | 275.61 | temperature | 30 | 14400 | > th | dose independent | sin | 12 | NA |
| 409 | 275.61 | temperature | 30 | 14400 | < th | dose independent | rect. | 16 | 20 |
| 414 | 275.76 | radiation | 40 | 1440 | < th | dose dependent | rect. | 15 | 17 |
| 427 | 276.32 | temperature | 30 | 14400 | > th | dose independent | rect. | 16 | 21 |
| 451 | 276.60 | temperature | 30 | 1440 | < th | dose independent | rect. | 17 | 21 |
| 459 | 276.87 | temperature | 30 | 14400 | > th | dose independent | rect. | 10 | 9 |
| 479 | 276.97 | temperature | 30 | 14400 | < th | dose independent | rect. | 10 | 3 |
| 480 | 277.00 | temperature | 30 | 14400 | < th | dose independent | rect. | 10 | 17 |
| 481 | 277.01 | temperature | 30 | 14400 | < th | dose independent | rect. | 10 | 14 |
| 487 | 277.02 | temperature | 30 | 14400 | < th | dose independent | rect. | 10 | 21 |
| 489 | 277.02 | radiation | 30 | 1440 | > th | dose dependent | rect. | 14 | 19 |
| 495 | 277.04 | temperature | 30 | 14400 | < th | dose independent | rect. | 10 | 9 |
| 546 | 277.49 | temperature | 30 | 14400 | > th | dose independent | rect. | 10 | 3 |
| 587 | 277.78 | radiation | 1 | 1440 | > th | dose dependent | rect. | 15 | 17 |
| 620 | 278.16 | temperature | 30 | 1440 | > th | dose independent | rect. | 16 | 22 |
| 631 | 278.22 | temperature | 30 | 14400 | > th | dose independent | no | NA | NA |
| 727 | 278.28 | temperature | 30 | 14400 | < th | dose independent | rect. | 6 | 21 |
| 732 | 278.30 | temperature | 30 | 14400 | < th | dose independent | rect. | 6 | 17 |
| 754 | 278.31 | temperature | 30 | 14400 | < th | dose independent | rect. | 2 | 22 |
| 758 | 278.32 | temperature | 30 | 14400 | < th | dose independent | no | NA | NA |
| 759 | 278.32 | temperature | 30 | 14400 | < th | dose independent | rect. | 6 | 13 |
| 770 | 278.32 | temperature | 30 | 14400 | < th | dose independent | rect. | 22 | 21 |
| 805 | 278.34 | temperature | 30 | 14400 | < th | dose independent | rect. | 2 | 17 |
| 837 | 278.71 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 15 |
| 838 | 278.71 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 18 |
| 839 | 278.72 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 20 |
| 842 | 278.74 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 22 |
| 854 | 278.80 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 11 |
| 888 | 279.11 | temperature | 30 | 1440 | > th | dose independent | rect. | 9 | 10 |
| 946 | 279.46 | temperature | 30 | 1440 | > th | dose independent | sin | 16 | NA |
| 947 | 279.48 | temperature | 30 | 1440 | < th | dose independent | rect. | 2 | 22 |
| 949 | 279.49 | temperature | 30 | 1440 | < th | dose independent | rect. | 6 | 18 |
| 951 | 279.49 | temperature | 30 | 1440 | < th | dose independent | rect. | 6 | 21 |
| 953 | 279.50 | temperature | 30 | 1440 | < th | dose independent | rect. | 4 | 20 |
| 957 | 279.50 | temperature | 30 | 1440 | < th | dose independent | rect. | 4 | 23 |
| 958 | 279.50 | temperature | 30 | 1440 | < th | dose independent | rect. | 6 | 23 |
| 991 | 279.54 | temperature | 30 | 1440 | < th | dose independent | no | NA | NA |
| 998 | 279.54 | temperature | 30 | 1440 | < th | dose independent | rect. | 21 | 23 |