Os03g0308600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0308600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 136.28 | 0.548 | 5.66 | 1.36 | 1.62 | 0.937 | -0.362 | -3.23 | -0.15 | 0.726 | 1.2 | 15 | -- | -- |
| 146.44 | 0.564 | 5.7 | 1.22 | 1.61 | 0.695 | -0.122 | -- | -0.204 | 0.648 | 1.2 | 13 | -- | -- |
| 136.81 | 0.545 | 5.66 | 1.37 | 1.62 | 0.94 | -- | -3.11 | -0.15 | 0.743 | 1.148 | 15 | -- | -- |
| 146.14 | 0.563 | 5.7 | 1.21 | 1.62 | 0.705 | -- | -- | -0.191 | 0.646 | 1.155 | 10 | -- | -- |
| 290 | 0.793 | 5.65 | 1.34 | -- | 0.228 | -- | -2.37 | -0.125 | -- | 1.2 | 20 | -- | -- |
| 159.03 | 0.591 | 5.7 | 1.12 | 1.49 | -- | -0.251 | -- | -0.176 | 0.161 | -- | -- | -- | -- |
| 159.3 | 0.591 | 5.7 | 1.13 | 1.49 | -- | -- | -- | -0.175 | 0.176 | -- | -- | -- | -- |
| 282.68 | 0.783 | 5.68 | 0.977 | -- | -0.584 | -- | -- | -0.183 | -- | 4.5 | 26 | -- | -- |
| 184.98 | 0.633 | 5.73 | -- | 1.6 | 0.513 | -- | -- | -0.249 | 0.614 | 1.1 | 10 | -- | -- |
| 299.52 | 0.809 | 5.67 | 1.18 | -- | -- | -- | -- | -0.153 | -- | -- | -- | -- | -- |
| 192.99 | 0.65 | 5.73 | -- | 1.51 | -- | -- | -- | -0.301 | 0.217 | -- | -- | -- | -- |
| 305.75 | 0.814 | 5.7 | -- | -- | -0.792 | -- | -- | -0.278 | -- | 4.691 | 13 | -- | -- |
| 336.18 | 0.856 | 5.7 | -- | -- | -- | -- | -- | -0.283 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 134.14 | wind | 3.0 | 10 | < th | dose dependent | rect. | 2 | 1 |
| 3 | 134.42 | wind | 1.0 | 10 | < th | dose independent | rect. | 2 | 1 |
| 4 | 134.55 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 23 | 4 |
| 7 | 134.80 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 2 | 1 |
| 8 | 134.86 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 2 | 1 |
| 12 | 135.06 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 1 | 3 |
| 14 | 135.10 | temperature | 20.0 | 10 | > th | dose independent | rect. | 2 | 1 |
| 17 | 135.22 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 2 | 1 |
| 18 | 135.22 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 3 | 1 |
| 24 | 135.30 | wind | 1.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 33 | 135.41 | wind | 9.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 34 | 135.41 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 37 | 135.41 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 41 | 135.41 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 50 | 135.41 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 51 | 135.41 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 71 | 135.41 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 4 | 23 |
| 81 | 135.43 | temperature | 25.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 85 | 135.46 | wind | 9.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 86 | 135.46 | temperature | 10.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 89 | 135.46 | humidity | 50.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 92 | 135.46 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 94 | 135.46 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 96 | 135.46 | radiation | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 101 | 135.46 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 2 | 1 |
| 102 | 135.46 | temperature | 10.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 103 | 135.46 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 108 | 135.46 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 114 | 135.51 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 123 | 135.58 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 129 | 135.69 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 135 | 135.95 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 136 | 135.96 | wind | 1.0 | 10 | > th | dose independent | sin | 12 | NA |
| 175 | 136.48 | wind | 1.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 181 | 136.92 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 3 | 23 |
| 182 | 136.92 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 204 | 138.58 | wind | 3.0 | 30 | < th | dose dependent | rect. | 2 | 3 |
| 205 | 138.68 | wind | 1.0 | 10 | > th | dose independent | no | NA | NA |
| 206 | 138.77 | temperature | 20.0 | 10 | > th | dose independent | rect. | 2 | 16 |
| 207 | 138.85 | wind | 3.0 | 10 | < th | dose dependent | rect. | 24 | 6 |
| 210 | 138.92 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 15 | 12 |
| 213 | 139.10 | wind | 1.0 | 30 | < th | dose independent | rect. | 24 | 3 |
| 215 | 139.14 | wind | 9.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 218 | 139.21 | wind | 3.0 | 10 | < th | dose dependent | rect. | 24 | 8 |
| 241 | 139.84 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 243 | 139.91 | temperature | 20.0 | 10 | > th | dose independent | rect. | 1 | 11 |
| 245 | 140.01 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 20 | 7 |
| 248 | 140.05 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 17 | 10 |
| 259 | 140.28 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 1 | 5 |
| 265 | 140.37 | wind | 3.0 | 10 | < th | dose dependent | sin | 9 | NA |
| 274 | 140.45 | temperature | 25.0 | 720 | > th | dose independent | rect. | 15 | 12 |
| 275 | 140.46 | wind | 1.0 | 10 | > th | dose independent | rect. | 5 | 23 |
| 295 | 140.81 | temperature | 25.0 | 270 | > th | dose independent | rect. | 23 | 4 |
| 301 | 140.85 | temperature | 20.0 | 270 | > th | dose independent | rect. | 22 | 19 |
| 302 | 140.87 | humidity | 50.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 306 | 140.89 | wind | 1.0 | 10 | < th | dose independent | rect. | 22 | 5 |
| 307 | 140.90 | temperature | 30.0 | 270 | < th | dose dependent | sin | 9 | NA |
| 313 | 140.93 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 22 | 12 |
| 315 | 140.96 | wind | 1.0 | 10 | < th | dose independent | rect. | 11 | 16 |
| 320 | 141.01 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 21 | 22 |
| 324 | 141.06 | wind | 1.0 | 10 | < th | dose independent | rect. | 17 | 10 |
| 350 | 141.18 | wind | 1.0 | 10 | < th | dose independent | sin | 14 | NA |
| 357 | 141.24 | temperature | 25.0 | 90 | < th | dose dependent | sin | 6 | NA |
| 360 | 141.29 | temperature | 20.0 | 270 | > th | dose independent | rect. | 6 | 23 |
| 386 | 141.47 | temperature | 10.0 | 270 | > th | dose dependent | sin | 9 | NA |
| 415 | 141.61 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 9 | 23 |
| 426 | 141.67 | wind | 3.0 | 30 | < th | dose dependent | rect. | 24 | 13 |
| 457 | 141.86 | temperature | 20.0 | 30 | > th | dose independent | rect. | 9 | 21 |
| 462 | 141.88 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 14 | 22 |
| 477 | 141.96 | temperature | 25.0 | 270 | < th | dose dependent | no | NA | NA |
| 504 | 142.07 | temperature | 20.0 | 270 | > th | dose independent | rect. | 22 | 12 |
| 521 | 142.14 | wind | 3.0 | 10 | < th | dose dependent | rect. | 22 | 8 |
| 549 | 142.25 | temperature | 20.0 | 10 | > th | dose independent | sin | 5 | NA |
| 558 | 142.31 | wind | 1.0 | 10 | < th | dose independent | rect. | 6 | 21 |
| 565 | 142.34 | wind | 3.0 | 10 | < th | dose dependent | rect. | 22 | 10 |
| 661 | 142.58 | wind | 1.0 | 10 | < th | dose independent | rect. | 6 | 23 |
| 733 | 142.78 | wind | 1.0 | 10 | > th | dose independent | rect. | 17 | 23 |
| 761 | 142.86 | wind | 3.0 | 10 | < th | dose dependent | rect. | 16 | 14 |
| 771 | 142.91 | temperature | 25.0 | 720 | > th | dose independent | sin | 14 | NA |
| 825 | 143.04 | wind | 1.0 | 10 | < th | dose independent | rect. | 24 | 9 |
| 869 | 143.17 | wind | 1.0 | 10 | < th | dose independent | rect. | 11 | 22 |
| 879 | 143.19 | wind | 1.0 | 10 | < th | dose independent | rect. | 22 | 11 |
| 898 | 143.22 | temperature | 20.0 | 270 | < th | dose independent | rect. | 21 | 22 |
| 901 | 143.23 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 19 | 6 |
| 930 | 143.27 | temperature | 20.0 | 10 | < th | dose independent | sin | 4 | NA |
| 948 | 143.30 | temperature | 10.0 | 720 | > th | dose dependent | sin | 13 | NA |
| 953 | 143.32 | wind | 1.0 | 10 | < th | dose independent | rect. | 24 | 14 |
| 965 | 143.34 | wind | 1.0 | 10 | < th | dose independent | rect. | 17 | 16 |
| 997 | 143.38 | wind | 1.0 | 10 | < th | dose independent | rect. | 22 | 16 |