Os03g0308200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os03g0308200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 42.06 | 0.305 | 9.8 | -0.527 | 0.746 | -0.724 | 0.0399 | 0.00113 | 0.0403 | 4.33 | 30 | 1265 | -- | -- |
| 41.57 | 0.3 | 9.82 | -0.532 | 0.74 | -0.744 | 0.0608 | -- | -0.0672 | 4.41 | 29.57 | 1243 | -- | -- |
| 41.65 | 0.301 | 9.83 | -0.611 | 0.733 | -0.771 | -- | 0.337 | -0.0437 | 4.38 | 29.6 | 1264 | -- | -- |
| 41.58 | 0.3 | 9.82 | -0.536 | 0.741 | -0.748 | -- | -- | -0.0676 | 4.39 | 29.56 | 1243 | -- | -- |
| 70.57 | 0.391 | 9.83 | -0.538 | -- | -0.842 | -- | 0.0294 | -0.0403 | -- | 29.51 | 1248 | -- | -- |
| 68.32 | 0.387 | 9.82 | -0.3 | 0.833 | -- | 0.191 | -- | -0.0621 | 3.97 | -- | -- | -- | -- |
| 68.42 | 0.387 | 9.82 | -0.302 | 0.834 | -- | -- | -- | -0.0631 | 3.95 | -- | -- | -- | -- |
| 70.56 | 0.391 | 9.83 | -0.536 | -- | -0.844 | -- | -- | -0.0456 | -- | 29.5 | 1256 | -- | -- |
| 48.76 | 0.325 | 9.81 | -- | 0.744 | -0.664 | -- | -- | -0.0125 | 4.35 | 29.5 | 1237 | -- | -- |
| 106.48 | 0.482 | 9.83 | -0.268 | -- | -- | -- | -- | -0.0409 | -- | -- | -- | -- | -- |
| 70.83 | 0.394 | 9.81 | -- | 0.828 | -- | -- | -- | -0.0295 | 3.96 | -- | -- | -- | -- |
| 77.83 | 0.411 | 9.81 | -- | -- | -0.762 | -- | -- | 0.00859 | -- | 29.52 | 1245 | -- | -- |
| 108.37 | 0.486 | 9.82 | -- | -- | -- | -- | -- | -0.0112 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 42.27 | humidity | 70 | 14400 | < th | dose independent | rect. | 18 | 2 |
| 2 | 42.58 | humidity | 70 | 14400 | < th | dose independent | rect. | 18 | 13 |
| 14 | 42.70 | temperature | 30 | 1440 | > th | dose independent | rect. | 10 | 2 |
| 15 | 42.70 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 3 |
| 17 | 42.74 | temperature | 30 | 1440 | < th | dose independent | rect. | 18 | 19 |
| 26 | 42.85 | humidity | 60 | 14400 | < th | dose dependent | rect. | 16 | 2 |
| 28 | 42.86 | temperature | 30 | 1440 | > th | dose independent | rect. | 18 | 19 |
| 47 | 42.94 | temperature | 30 | 1440 | > th | dose dependent | rect. | 17 | 22 |
| 52 | 42.97 | humidity | 70 | 14400 | > th | dose independent | rect. | 18 | 2 |
| 53 | 42.97 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 18 |
| 58 | 42.98 | temperature | 30 | 1440 | > th | dose independent | rect. | 9 | 10 |
| 59 | 42.98 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 10 |
| 86 | 43.00 | temperature | 30 | 1440 | > th | dose dependent | rect. | 10 | 9 |
| 104 | 43.02 | humidity | 70 | 14400 | > th | dose independent | rect. | 18 | 13 |
| 119 | 43.03 | temperature | 30 | 1440 | > th | dose dependent | sin | 22 | NA |
| 145 | 43.05 | temperature | 30 | 1440 | > th | dose dependent | no | NA | NA |
| 243 | 43.07 | humidity | 70 | 14400 | > th | dose independent | rect. | 18 | 10 |
| 268 | 43.09 | humidity | 70 | 14400 | > th | dose independent | rect. | 18 | 7 |
| 271 | 43.09 | temperature | 30 | 1440 | > th | dose independent | rect. | 13 | 23 |
| 272 | 43.09 | temperature | 30 | 1440 | > th | dose dependent | rect. | 13 | 2 |
| 276 | 43.10 | humidity | 70 | 14400 | > th | dose independent | rect. | 18 | 5 |
| 308 | 43.12 | temperature | 30 | 1440 | < th | dose independent | rect. | 22 | 21 |
| 334 | 43.13 | temperature | 30 | 1440 | < th | dose independent | no | NA | NA |
| 348 | 43.13 | temperature | 30 | 1440 | < th | dose independent | rect. | 2 | 17 |
| 447 | 43.15 | temperature | 30 | 1440 | > th | dose independent | no | NA | NA |
| 568 | 43.20 | temperature | 30 | 1440 | < th | dose independent | sin | 10 | NA |
| 571 | 43.21 | temperature | 30 | 1440 | < th | dose independent | sin | 0 | NA |
| 593 | 43.23 | temperature | 30 | 1440 | > th | dose independent | sin | 21 | NA |
| 610 | 43.27 | temperature | 30 | 1440 | < th | dose independent | rect. | 24 | 14 |
| 624 | 43.28 | temperature | 30 | 1440 | < th | dose independent | rect. | 2 | 12 |
| 629 | 43.29 | radiation | 20 | 1440 | > th | dose independent | rect. | 16 | 15 |
| 706 | 43.35 | temperature | 25 | 1440 | > th | dose dependent | rect. | 6 | 2 |
| 758 | 43.42 | humidity | 80 | 14400 | < th | dose dependent | rect. | 17 | 2 |
| 825 | 43.45 | temperature | 30 | 1440 | > th | dose independent | sin | 10 | NA |
| 913 | 43.55 | temperature | 30 | 1440 | > th | dose independent | rect. | 16 | 3 |
| 936 | 43.56 | temperature | 30 | 1440 | < th | dose independent | rect. | 16 | 12 |
| 947 | 43.58 | temperature | 30 | 1440 | < th | dose independent | rect. | 16 | 8 |
| 987 | 43.61 | temperature | 30 | 1440 | < th | dose independent | rect. | 16 | 5 |
| 990 | 43.62 | temperature | 30 | 1440 | > th | dose dependent | sin | 9 | NA |
| 999 | 43.65 | humidity | 50 | 14400 | > th | dose dependent | rect. | 18 | 1 |