Os03g0307400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Soluble quinoprotein glucose dehydrogenase domain containing protein.
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Os03g0307400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Soluble quinoprotein glucose dehydrogenase domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 74.93 | 0.407 | 8.15 | 0.47 | 0.977 | 1.15 | -0.763 | 0.186 | 0.404 | 13.3 | 25.57 | 30 | -- | -- |
| 74.75 | 0.406 | 8.14 | 0.494 | 0.996 | 1.13 | -0.829 | -- | 0.413 | 13.3 | 25.91 | 26 | -- | -- |
| 76.37 | 0.41 | 8.16 | 0.347 | 1.03 | 1.19 | -- | 0.779 | 0.387 | 13.4 | 26.1 | 18 | -- | -- |
| 77.36 | 0.41 | 8.15 | 0.471 | 1.03 | 1.15 | -- | -- | 0.414 | 13.4 | 26.49 | 9 | -- | -- |
| 102.97 | 0.473 | 8.15 | 0.674 | -- | 1.02 | -- | -1.36 | 0.314 | -- | 37.28 | 1001 | -- | -- |
| 93.95 | 0.454 | 8.2 | 0.233 | 0.725 | -- | -0.857 | -- | 0.171 | 13.2 | -- | -- | -- | -- |
| 96.99 | 0.461 | 8.2 | 0.203 | 0.726 | -- | -- | -- | 0.167 | 13.2 | -- | -- | -- | -- |
| 102.66 | 0.472 | 8.17 | 0.544 | -- | 1.28 | -- | -- | 0.367 | -- | 43.85 | 1019 | -- | -- |
| 82.69 | 0.426 | 8.17 | -- | 0.969 | 0.968 | -- | -- | 0.329 | 13.4 | 26.3 | 8 | -- | -- |
| 129.62 | 0.532 | 8.21 | 0.175 | -- | -- | -- | -- | 0.152 | -- | -- | -- | -- | -- |
| 98.07 | 0.463 | 8.21 | -- | 0.723 | -- | -- | -- | 0.144 | 13.2 | -- | -- | -- | -- |
| 109.53 | 0.487 | 8.19 | -- | -- | 1.06 | -- | -- | 0.276 | -- | 44.06 | 1008 | -- | -- |
| 130.43 | 0.533 | 8.22 | -- | -- | -- | -- | -- | 0.132 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 65.88 | temperature | 20 | 270 | > th | dose dependent | rect. | 16 | 17 |
| 2 | 65.91 | temperature | 20 | 30 | > th | dose dependent | sin | 9 | NA |
| 7 | 66.72 | temperature | 20 | 10 | > th | dose dependent | rect. | 17 | 19 |
| 37 | 68.92 | temperature | 30 | 10 | < th | dose dependent | sin | 8 | NA |
| 65 | 69.90 | temperature | 20 | 720 | > th | dose dependent | rect. | 15 | 12 |
| 104 | 71.07 | temperature | 20 | 720 | > th | dose dependent | sin | 14 | NA |
| 109 | 71.19 | temperature | 10 | 720 | > th | dose dependent | rect. | 15 | 12 |
| 122 | 71.41 | temperature | 10 | 720 | > th | dose dependent | rect. | 15 | 10 |
| 138 | 71.62 | temperature | 30 | 720 | < th | dose dependent | rect. | 18 | 5 |
| 189 | 72.25 | temperature | 30 | 720 | < th | dose dependent | rect. | 19 | 2 |
| 220 | 72.85 | temperature | 20 | 270 | > th | dose independent | rect. | 15 | 19 |
| 247 | 73.19 | temperature | 30 | 270 | < th | dose dependent | rect. | 19 | 11 |
| 268 | 73.42 | temperature | 15 | 270 | > th | dose dependent | rect. | 23 | 10 |
| 271 | 73.45 | temperature | 25 | 720 | < th | dose independent | rect. | 18 | 5 |
| 276 | 73.48 | temperature | 20 | 10 | > th | dose independent | rect. | 17 | 19 |
| 280 | 73.52 | wind | 5 | 43200 | > th | dose independent | rect. | 8 | 10 |
| 287 | 73.59 | wind | 5 | 43200 | < th | dose independent | rect. | 8 | 10 |
| 292 | 73.61 | wind | 5 | 43200 | > th | dose independent | rect. | 10 | 6 |
| 293 | 73.62 | wind | 5 | 43200 | > th | dose independent | rect. | 9 | 8 |
| 296 | 73.64 | temperature | 20 | 90 | > th | dose independent | rect. | 17 | 18 |
| 299 | 73.65 | temperature | 20 | 720 | > th | dose dependent | rect. | 21 | 4 |
| 302 | 73.66 | wind | 5 | 43200 | < th | dose independent | rect. | 9 | 7 |
| 304 | 73.67 | temperature | 25 | 90 | < th | dose dependent | rect. | 12 | 23 |
| 309 | 73.70 | wind | 5 | 43200 | > th | dose independent | sin | 23 | NA |
| 318 | 73.74 | wind | 5 | 43200 | < th | dose independent | sin | 23 | NA |
| 329 | 73.76 | temperature | 30 | 10 | < th | dose dependent | rect. | 20 | 12 |
| 350 | 73.84 | wind | 5 | 43200 | < th | dose independent | rect. | 8 | 14 |
| 400 | 73.95 | temperature | 30 | 90 | < th | dose dependent | rect. | 21 | 12 |
| 475 | 74.11 | temperature | 30 | 720 | < th | dose dependent | rect. | 16 | 14 |
| 499 | 74.17 | temperature | 25 | 90 | < th | dose dependent | rect. | 17 | 18 |
| 500 | 74.18 | wind | 5 | 14400 | > th | dose independent | rect. | 11 | 1 |
| 521 | 74.21 | temperature | 30 | 720 | < th | dose dependent | sin | 14 | NA |
| 561 | 74.28 | temperature | 25 | 90 | < th | dose dependent | rect. | 15 | 20 |
| 573 | 74.31 | wind | 5 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 613 | 74.38 | wind | 3 | 43200 | > th | dose dependent | rect. | 9 | 7 |
| 667 | 74.47 | temperature | 25 | 90 | < th | dose dependent | rect. | 23 | 12 |
| 668 | 74.47 | temperature | 25 | 90 | < th | dose dependent | rect. | 19 | 16 |
| 675 | 74.49 | temperature | 25 | 1440 | > th | dose independent | rect. | 16 | 8 |
| 678 | 74.49 | wind | 3 | 43200 | > th | dose dependent | rect. | 10 | 5 |
| 701 | 74.54 | temperature | 15 | 10 | > th | dose dependent | rect. | 2 | 10 |
| 721 | 74.58 | temperature | 25 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 722 | 74.59 | temperature | 25 | 4320 | > th | dose independent | rect. | 17 | 1 |
| 738 | 74.62 | temperature | 25 | 90 | < th | dose dependent | rect. | 21 | 14 |
| 829 | 74.81 | temperature | 25 | 4320 | < th | dose independent | rect. | 17 | 1 |
| 862 | 74.86 | wind | 5 | 43200 | > th | dose dependent | sin | 22 | NA |
| 866 | 74.86 | wind | 5 | 43200 | > th | dose dependent | rect. | 8 | 13 |
| 969 | 75.00 | wind | 5 | 43200 | < th | dose independent | rect. | 20 | 23 |
| 977 | 75.01 | wind | 5 | 43200 | < th | dose independent | no | NA | NA |