Os03g0301900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0301900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 250.28 | 0.743 | 5.55 | -0.147 | 0.621 | 1.59 | 0.00872 | 2.89 | -0.977 | 14.4 | 23.3 | 537 | -- | -- |
| 260.58 | 0.752 | 5.5 | 0.234 | 0.578 | 1.21 | 0.0213 | -- | -0.905 | 14.4 | 23.51 | 605 | -- | -- |
| 250.28 | 0.737 | 5.55 | -0.147 | 0.621 | 1.59 | -- | 2.89 | -0.977 | 14.4 | 23.3 | 535 | -- | -- |
| 260.46 | 0.752 | 5.5 | 0.237 | 0.609 | 1.14 | -- | -- | -0.905 | 14.3 | 23.6 | 571 | -- | -- |
| 267.53 | 0.762 | 5.55 | -0.126 | -- | 1.71 | -- | 2.89 | -0.965 | -- | 23.61 | 981 | -- | -- |
| 277.72 | 0.781 | 5.54 | -0.0617 | 0.634 | -- | 0.107 | -- | -1.1 | 13.6 | -- | -- | -- | -- |
| 277.77 | 0.78 | 5.54 | -0.058 | 0.634 | -- | -- | -- | -1.1 | 13.6 | -- | -- | -- | -- |
| 276.21 | 0.774 | 5.49 | 0.296 | -- | 1.29 | -- | -- | -0.842 | -- | 25.2 | 967 | -- | -- |
| 261.77 | 0.754 | 5.51 | -- | 0.613 | 1.07 | -- | -- | -0.944 | 14.2 | 23.6 | 563 | -- | -- |
| 302.33 | 0.812 | 5.55 | -0.0835 | -- | -- | -- | -- | -1.12 | -- | -- | -- | -- | -- |
| 277.86 | 0.78 | 5.54 | -- | 0.635 | -- | -- | -- | -1.1 | 13.6 | -- | -- | -- | -- |
| 278.24 | 0.777 | 5.5 | -- | -- | 1.16 | -- | -- | -0.895 | -- | 25.3 | 962 | -- | -- |
| 302.52 | 0.812 | 5.54 | -- | -- | -- | -- | -- | -1.11 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 230.33 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 3 | 230.52 | wind | 9.0 | 14400 | < th | dose independent | rect. | 10 | 3 |
| 4 | 230.64 | wind | 9.0 | 14400 | < th | dose independent | rect. | 6 | 7 |
| 7 | 231.41 | wind | 9.0 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 11 | 233.93 | wind | 9.0 | 14400 | > th | dose independent | rect. | 10 | 3 |
| 12 | 233.97 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 2 | 1 |
| 14 | 234.37 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 5 | 2 |
| 16 | 234.65 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 4 | 3 |
| 21 | 234.85 | wind | 9.0 | 14400 | > th | dose independent | rect. | 6 | 7 |
| 31 | 235.50 | wind | 3.0 | 14400 | < th | dose independent | rect. | 1 | 6 |
| 32 | 235.54 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 5 | 2 |
| 44 | 236.15 | wind | 3.0 | 14400 | < th | dose independent | rect. | 1 | 3 |
| 61 | 236.57 | wind | 3.0 | 14400 | > th | dose independent | rect. | 1 | 6 |
| 68 | 236.87 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 6 | 7 |
| 82 | 237.07 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 93 | 237.28 | wind | 3.0 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 98 | 237.39 | wind | 9.0 | 14400 | < th | dose independent | rect. | 2 | 11 |
| 106 | 237.76 | wind | 7.0 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 108 | 237.80 | wind | 3.0 | 14400 | > th | dose independent | rect. | 1 | 3 |
| 110 | 237.84 | wind | 3.0 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 169 | 239.18 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 171 | 239.19 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 3 | 4 |
| 182 | 239.48 | wind | 3.0 | 14400 | < th | dose independent | rect. | 19 | 12 |
| 215 | 240.08 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 21 | 10 |
| 218 | 240.25 | wind | 3.0 | 14400 | < th | dose independent | rect. | 24 | 13 |
| 227 | 240.36 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 231 | 240.49 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 3 | 10 |
| 233 | 240.53 | wind | 3.0 | 14400 | < th | dose independent | sin | 8 | NA |
| 245 | 240.72 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 24 | 13 |
| 262 | 240.92 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 24 | 7 |
| 314 | 241.38 | wind | 3.0 | 14400 | < th | dose dependent | sin | 7 | NA |
| 316 | 241.43 | wind | 3.0 | 14400 | > th | dose independent | rect. | 24 | 13 |
| 318 | 241.44 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 5 | 1 |
| 349 | 241.61 | wind | 3.0 | 14400 | > th | dose independent | rect. | 19 | 12 |
| 373 | 241.89 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 3 | 7 |
| 400 | 242.06 | wind | 3.0 | 14400 | > th | dose independent | sin | 8 | NA |
| 419 | 242.22 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 22 | 6 |
| 420 | 242.23 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 3 | 10 |
| 433 | 242.37 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 3 | 7 |
| 434 | 242.37 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 3 | 7 |
| 439 | 242.45 | wind | 1.0 | 1440 | < th | dose independent | rect. | 12 | 1 |
| 452 | 242.57 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 3 | 7 |
| 514 | 243.08 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 1 | 16 |
| 519 | 243.11 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 523 | 243.13 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 4 | 2 |
| 524 | 243.13 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 4 | 2 |
| 529 | 243.18 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 531 | 243.18 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 1 | 6 |
| 539 | 243.27 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 4 | 2 |
| 542 | 243.28 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 3 | 10 |
| 545 | 243.30 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 4 | 2 |
| 566 | 243.47 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 3 | 4 |
| 601 | 243.70 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 606 | 243.73 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 608 | 243.73 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 657 | 244.14 | wind | 3.0 | 1440 | < th | dose dependent | rect. | 12 | 1 |
| 670 | 244.23 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 1 | 16 |
| 671 | 244.23 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 1 | 16 |
| 672 | 244.24 | wind | 1.0 | 1440 | > th | dose independent | rect. | 12 | 1 |
| 681 | 244.29 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 3 | 14 |
| 684 | 244.29 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 3 | 14 |
| 688 | 244.32 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 1 | 16 |
| 692 | 244.36 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 3 | 14 |
| 729 | 244.59 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 24 | 13 |
| 746 | 244.67 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 1 | 12 |
| 753 | 244.73 | wind | 9.0 | 14400 | < th | dose independent | sin | 4 | NA |
| 771 | 244.86 | wind | 1.0 | 4320 | > th | dose independent | rect. | 17 | 2 |
| 845 | 245.22 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 5 | 7 |
| 883 | 245.44 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 1 | 12 |
| 890 | 245.47 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 3 | 10 |
| 893 | 245.50 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 1 | 1 |