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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os03g0301600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.85 (0.0244) R2 : 0.00182
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.047 (0.0514) R2dN8 : 0.00236 R2N8 : 0.00182
σ : 0.46
deviance : 97.15
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
91.8 0.45 2.85 -0.263 0.0446 0.306 -0.525 -0.362 0.0678 24 90.87 200 -- --
91.91 0.447 2.85 -0.271 0.035 0.288 -0.61 -- 0.0621 0.922 91.13 164 -- --
92.82 0.449 2.85 -0.238 0.039 0.319 -- -0.53 0.0765 22.1 91 165 -- --
93.45 0.45 2.85 -0.251 0.0428 0.269 -- -- 0.0572 0.788 91.58 164 -- --
92.9 0.449 2.85 -0.237 -- 0.322 -- -0.602 0.0751 -- 91.06 161 -- --
93.95 0.454 2.86 -0.239 0.121 -- -0.525 -- 0.017 1.84 -- -- -- --
94.88 0.456 2.86 -0.223 0.134 -- -- -- 0.0193 3.31 -- -- -- --
93.54 0.45 2.85 -0.25 -- 0.297 -- -- 0.0649 -- 91.87 149 -- --
94.81 0.453 2.85 -- 0.0522 0.39 -- -- 0.0806 23.4 93.87 122 -- --
95.9 0.458 2.86 -0.218 -- -- -- -- 0.0228 -- -- -- -- --
96.2 0.459 2.85 -- 0.13 -- -- -- 0.0441 3.32 -- -- -- --
94.86 0.454 2.84 -- -- 0.417 -- -- 0.0817 -- 93.95 86 -- --
97.15 0.46 2.85 -- -- -- -- -- 0.047 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 85.37 temperature 25.0 30 > th dose dependent rect. 19 1
4 89.34 atmosphere 1005.0 10 < th dose dependent rect. 19 1
14 90.26 temperature 25.0 30 > th dose independent rect. 19 1
17 90.40 wind 1.0 90 > th dose independent rect. 13 23
18 90.42 atmosphere 1005.0 30 > th dose dependent rect. 12 2
25 90.80 humidity 90.0 270 > th dose dependent rect. 20 8
28 90.84 atmosphere 1005.0 30 > th dose independent rect. 12 2
31 90.89 temperature 20.0 90 > th dose independent rect. 2 5
33 90.90 wind 3.0 30 < th dose dependent rect. 3 4
36 90.92 humidity 90.0 270 > th dose independent rect. 23 5
41 90.96 humidity 90.0 270 > th dose independent rect. 1 3
42 90.97 temperature 20.0 270 > th dose independent rect. 2 2
45 90.99 temperature 10.0 1440 > th dose independent rect. 6 7
48 90.99 atmosphere 995.0 1440 > th dose independent rect. 6 7
49 90.99 temperature 10.0 1440 > th dose independent rect. 13 17
59 91.01 humidity 70.0 270 < th dose independent rect. 18 1
65 91.02 radiation 1.0 10 > th dose dependent rect. 18 12
66 91.02 wind 9.0 30 < th dose dependent rect. 12 19
69 91.04 humidity 90.0 270 > th dose independent rect. 21 8
77 91.07 atmosphere 1000.0 10 > th dose independent rect. 12 19
93 91.11 wind 9.0 10 < th dose independent rect. 12 19
94 91.12 radiation 1.0 10 > th dose dependent rect. 5 1
108 91.13 humidity 80.0 30 > th dose dependent rect. 1 6
113 91.15 wind 1.0 90 < th dose independent rect. 3 2
117 91.17 humidity 50.0 30 > th dose independent rect. 7 5
123 91.18 humidity 80.0 270 > th dose dependent rect. 1 3
125 91.19 temperature 30.0 1440 > th dose dependent rect. 18 1
142 91.21 wind 1.0 720 < th dose dependent rect. 8 1
158 91.22 wind 3.0 30 > th dose independent rect. 12 2
163 91.23 temperature 10.0 10 > th dose independent rect. 7 5
165 91.23 atmosphere 995.0 10 > th dose independent rect. 7 5
166 91.23 atmosphere 1015.0 10 < th dose independent rect. 7 5
167 91.23 temperature 10.0 10 > th dose independent rect. 12 19
169 91.24 precipitation 0.1 10 < th dose independent rect. 7 5
171 91.24 precipitation 0.1 10 < th dose dependent rect. 7 5
177 91.25 radiation 1.0 10 > th dose independent rect. 7 5
188 91.26 temperature 10.0 1440 > th dose independent rect. 8 5
192 91.26 atmosphere 995.0 1440 > th dose independent rect. 8 5
194 91.26 temperature 10.0 1440 > th dose independent rect. 13 19
199 91.27 wind 9.0 30 < th dose independent rect. 7 5
201 91.27 precipitation 0.1 30 < th dose independent rect. 12 19
202 91.27 wind 1.0 90 < th dose dependent rect. 3 2
203 91.27 precipitation 0.1 30 < th dose dependent rect. 12 19
207 91.28 atmosphere 1015.0 30 < th dose independent rect. 12 19
208 91.28 humidity 90.0 270 > th dose dependent sin 13 NA
212 91.29 radiation 20.0 90 > th dose independent rect. 12 1
223 91.32 wind 1.0 10 > th dose independent rect. 7 5
231 91.33 radiation 1.0 90 > th dose dependent rect. 12 1
232 91.33 wind 1.0 10 > th dose dependent rect. 12 2
237 91.35 humidity 50.0 1440 < th dose independent rect. 16 1
238 91.35 humidity 60.0 10 > th dose independent rect. 12 2
239 91.35 humidity 50.0 30 > th dose independent rect. 12 19
242 91.35 temperature 20.0 270 > th dose dependent rect. 2 2
261 91.37 humidity 50.0 1440 < th dose dependent rect. 16 1
264 91.38 wind 1.0 720 < th dose independent rect. 8 1
268 91.39 radiation 30.0 10 > th dose independent rect. 12 2
275 91.39 humidity 90.0 270 > th dose dependent rect. 3 1
292 91.41 temperature 15.0 10 > th dose dependent rect. 2 5
294 91.42 wind 9.0 270 < th dose independent rect. 8 23
298 91.43 temperature 10.0 10 > th dose dependent rect. 12 19
307 91.45 humidity 50.0 1440 > th dose independent rect. 16 1
314 91.46 radiation 40.0 30 < th dose independent rect. 7 19
315 91.46 radiation 1.0 90 > th dose dependent rect. 4 2
329 91.47 humidity 90.0 270 > th dose independent sin 11 NA
354 91.48 radiation 1.0 10 > th dose dependent rect. 12 2
364 91.49 precipitation 0.1 90 < th dose independent rect. 13 23
371 91.49 precipitation 0.1 90 < th dose dependent rect. 13 23
373 91.50 wind 1.0 90 > th dose independent rect. 20 15
376 91.50 wind 7.0 30 < th dose dependent rect. 18 13
389 91.52 humidity 80.0 90 < th dose independent rect. 12 1
400 91.53 temperature 30.0 90 < th dose independent rect. 12 1
402 91.53 temperature 30.0 30 < th dose independent rect. 7 5
419 91.54 wind 1.0 90 < th dose dependent rect. 23 6
424 91.55 temperature 30.0 30 < th dose independent rect. 14 22
435 91.56 precipitation 0.1 10 < th dose independent rect. 14 22
441 91.56 precipitation 0.1 10 < th dose dependent rect. 14 22
442 91.57 wind 9.0 90 < th dose independent rect. 12 1
443 91.57 humidity 60.0 90 > th dose independent rect. 12 1
449 91.57 humidity 90.0 270 < th dose independent rect. 20 13
451 91.57 wind 1.0 720 > th dose independent rect. 7 18
460 91.58 atmosphere 995.0 4320 > th dose independent rect. 5 1
461 91.58 atmosphere 1000.0 90 > th dose independent rect. 13 23
470 91.58 humidity 50.0 10 > th dose dependent rect. 18 13
476 91.59 atmosphere 1010.0 90 < th dose independent rect. 12 1
477 91.59 wind 1.0 270 > th dose independent rect. 14 11
485 91.60 temperature 10.0 90 > th dose independent rect. 12 1
491 91.60 precipitation 0.1 90 < th dose independent rect. 12 1
493 91.60 wind 9.0 270 < th dose independent rect. 1 13
495 91.60 temperature 10.0 90 > th dose independent rect. 13 23
496 91.60 precipitation 0.1 90 < th dose dependent rect. 12 1
546 91.64 humidity 90.0 90 < th dose dependent rect. 12 1
573 91.65 wind 9.0 1440 < th dose independent rect. 3 3
574 91.65 temperature 10.0 1440 > th dose independent rect. 3 3
577 91.65 temperature 30.0 1440 < th dose independent rect. 3 3
581 91.65 humidity 50.0 1440 > th dose independent rect. 3 3
590 91.65 atmosphere 995.0 1440 > th dose independent rect. 3 3
591 91.65 radiation 20.0 1440 < th dose independent rect. 3 3
600 91.65 temperature 30.0 90 < th dose independent rect. 14 11
603 91.65 temperature 10.0 1440 > th dose independent rect. 6 21
657 91.68 precipitation 0.1 270 < th dose independent rect. 1 13
660 91.68 precipitation 0.1 270 < th dose independent rect. 8 23
667 91.68 precipitation 0.1 270 < th dose dependent rect. 1 13
672 91.68 precipitation 0.1 270 < th dose dependent rect. 8 23
674 91.69 radiation 1.0 10 > th dose independent rect. 12 2
676 91.69 temperature 10.0 270 > th dose independent rect. 14 11
677 91.69 temperature 10.0 270 > th dose independent rect. 1 13
678 91.69 atmosphere 995.0 270 > th dose independent rect. 1 13
679 91.69 atmosphere 1015.0 270 < th dose independent rect. 1 13
690 91.69 wind 1.0 90 < th dose dependent rect. 14 15
692 91.69 humidity 50.0 30 > th dose dependent rect. 12 19
694 91.70 radiation 20.0 4320 < th dose independent rect. 5 1
697 91.70 humidity 50.0 270 > th dose independent rect. 1 13
720 91.72 wind 9.0 270 < th dose independent rect. 7 1
721 91.72 temperature 10.0 270 > th dose independent rect. 7 1
723 91.72 temperature 30.0 270 < th dose independent rect. 7 1
724 91.72 humidity 50.0 270 > th dose independent rect. 7 1
726 91.72 atmosphere 995.0 270 > th dose independent rect. 7 1
727 91.72 atmosphere 1015.0 270 < th dose independent rect. 7 1
728 91.72 precipitation 0.1 270 < th dose independent rect. 7 1
729 91.72 atmosphere 1010.0 10 < th dose independent rect. 12 2
737 91.72 temperature 10.0 270 > th dose independent rect. 8 23
738 91.72 temperature 25.0 10 > th dose dependent rect. 5 1
740 91.72 precipitation 0.1 270 < th dose dependent rect. 7 1
754 91.73 wind 1.0 270 > th dose independent rect. 7 1
755 91.73 wind 7.0 1440 < th dose independent rect. 5 1
758 91.73 temperature 10.0 1440 > th dose independent rect. 5 1
761 91.73 temperature 30.0 1440 < th dose independent rect. 5 1
765 91.73 humidity 50.0 1440 > th dose independent rect. 5 1
775 91.73 atmosphere 1015.0 1440 < th dose independent rect. 5 1
788 91.73 wind 1.0 90 < th dose independent rect. 23 7
789 91.73 atmosphere 1000.0 10 > th dose independent rect. 14 22
791 91.73 temperature 10.0 1440 > th dose independent rect. 6 23
794 91.73 humidity 90.0 30 > th dose dependent sin 7 NA
806 91.74 precipitation 0.1 270 < th dose independent rect. 14 11
829 91.74 precipitation 0.1 270 < th dose dependent rect. 14 11
849 91.75 humidity 90.0 270 < th dose independent rect. 14 19
860 91.75 temperature 10.0 10 > th dose dependent rect. 7 5
876 91.76 temperature 10.0 1440 > th dose independent rect. 13 2
889 91.76 temperature 10.0 1440 > th dose independent rect. 15 22
906 91.77 radiation 40.0 270 < th dose independent rect. 7 1
907 91.77 atmosphere 1000.0 10 > th dose independent rect. 2 5
909 91.77 wind 1.0 30 > th dose independent rect. 5 7
924 91.78 radiation 10.0 10 < th dose independent rect. 2 5
941 91.78 atmosphere 995.0 30 > th dose dependent rect. 12 19
968 91.80 atmosphere 1015.0 1440 < th dose independent rect. 3 3