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Os03g0300900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Glycosyl transferase, family 8 protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.24 (0.0539) R2 : 0.478
β1 : -3.34 (0.202) R2dD : 0.341 R2D : 0.16
β2 : -- (--) R2dC : -- R2C : --
β3 : 2.27 (0.153) R2dE : 0.267 R2E : 0.139
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.534 (0.115) R2dN8 : 0.0329 R2N8 : 0.00851
σ : 1.01
deviance : 468.25
__
_____
C
peak time of C : --
E
wheather : temperature
threshold : 27.91
memory length : 1168
response mode : > th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
456.5 1 9.33 -4.13 0.409 2.64 -1.08 -4 -0.536 17.7 28.41 1221 -- --
457.61 0.996 9.24 -3.35 0.407 2.26 -0.957 -- -0.475 17.8 28.16 1194 -- --
457.81 0.997 9.32 -4 0.429 2.55 -- -3.29 -0.564 19.1 28.24 1217 -- --
458.94 0.998 9.24 -3.32 0.439 2.18 -- -- -0.467 19.1 28.32 1216 -- --
466.64 1.01 9.32 -3.98 -- 2.58 -- -3.04 -0.632 -- 27.86 1172 -- --
670.17 1.21 9.29 -2.67 0.553 -- 1.08 -- -0.656 22.7 -- -- -- --
673.84 1.22 9.29 -2.71 0.576 -- -- -- -0.655 21.7 -- -- -- --
468.25 1.01 9.24 -3.34 -- 2.27 -- -- -0.534 -- 27.91 1168 -- --
732.8 1.26 9.16 -- 0.541 1.77 -- -- 0.00248 19.5 31.2 1172 -- --
693.58 1.23 9.27 -2.71 -- -- -- -- -0.656 -- -- -- -- --
867.62 1.38 9.22 -- 0.572 -- -- -- -0.353 21.4 -- -- -- --
744.15 1.27 9.13 -- -- 1.69 -- -- -0.00453 -- 31.1 1133 -- --
886.75 1.39 9.21 -- -- -- -- -- -0.356 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 463.27 radiation 20 1440 > th dose dependent rect. 16 16
2 463.86 radiation 20 1440 > th dose independent rect. 16 16
4 468.82 radiation 20 1440 < th dose independent rect. 16 16
5 470.00 humidity 70 720 > th dose independent sin 12 NA
6 470.05 humidity 70 1440 < th dose dependent sin 12 NA
8 470.87 humidity 60 1440 > th dose independent sin 15 NA
9 470.95 humidity 70 720 < th dose independent sin 11 NA
12 471.62 humidity 60 1440 < th dose independent sin 15 NA
18 472.75 humidity 80 1440 < th dose dependent rect. 16 3
19 472.86 radiation 20 1440 < th dose independent rect. 16 1
20 472.93 radiation 20 1440 > th dose independent rect. 16 1
38 474.09 humidity 70 1440 < th dose dependent rect. 15 17
40 474.15 humidity 70 1440 < th dose dependent rect. 15 5
55 474.60 humidity 60 1440 > th dose independent rect. 12 7
56 474.60 humidity 60 1440 < th dose independent rect. 12 7
58 474.61 radiation 20 1440 < th dose independent rect. 16 11
74 474.79 humidity 70 14400 < th dose dependent rect. 17 2
76 474.89 radiation 20 1440 < th dose independent rect. 16 9
77 474.91 radiation 20 1440 < th dose independent rect. 16 4
81 475.02 humidity 60 1440 > th dose independent rect. 12 15
82 475.03 humidity 60 1440 > th dose independent rect. 12 13
102 475.13 humidity 60 14400 < th dose independent rect. 17 1
128 475.47 humidity 70 14400 < th dose dependent rect. 17 14
132 475.53 temperature 30 1440 > th dose dependent sin 14 NA
133 475.54 humidity 70 14400 < th dose dependent rect. 17 5
175 476.02 temperature 30 1440 > th dose dependent rect. 14 5
192 476.13 temperature 25 720 > th dose dependent rect. 17 16
194 476.16 humidity 80 1440 < th dose dependent rect. 15 21
203 476.56 temperature 30 1440 > th dose dependent rect. 14 21
277 477.70 temperature 25 720 > th dose dependent rect. 17 6
353 478.67 humidity 60 14400 > th dose independent rect. 17 2
399 479.20 temperature 30 1440 > th dose dependent no NA NA
507 479.69 temperature 30 1440 > th dose independent sin 13 NA
552 480.37 temperature 30 1440 < th dose independent sin 12 NA
558 480.51 temperature 30 1440 > th dose independent rect. 15 4
610 481.53 humidity 60 14400 > th dose independent rect. 17 10
611 481.56 humidity 60 14400 > th dose independent rect. 17 8
633 481.66 humidity 60 14400 > th dose independent rect. 17 15
640 481.80 humidity 60 14400 > th dose independent rect. 17 4
666 482.05 temperature 30 1440 < th dose independent rect. 15 12
668 482.07 temperature 30 1440 < th dose independent rect. 15 14
670 482.09 temperature 30 1440 < th dose independent rect. 15 10
673 482.15 temperature 30 1440 < th dose independent rect. 15 16
680 482.26 temperature 30 1440 < th dose independent rect. 15 4
687 482.45 humidity 70 720 > th dose independent rect. 16 15
702 482.82 humidity 60 14400 < th dose dependent rect. 16 17
703 482.84 humidity 70 1440 < th dose independent rect. 17 14
719 482.93 humidity 60 14400 < th dose independent rect. 17 15
726 483.08 humidity 70 1440 < th dose independent rect. 17 3
770 483.31 temperature 30 1440 < th dose independent rect. 15 21
777 483.47 humidity 60 14400 < th dose independent rect. 17 5
844 483.83 temperature 30 1440 > th dose independent rect. 15 21
851 483.93 humidity 80 43200 < th dose independent rect. 22 1
864 483.97 humidity 50 4320 > th dose independent rect. 15 2
866 484.00 humidity 80 1440 < th dose dependent rect. 6 15
898 484.34 humidity 70 1440 < th dose independent rect. 17 19
910 484.65 temperature 30 1440 < th dose independent rect. 17 19
933 485.01 humidity 70 720 > th dose independent rect. 16 17
947 485.23 temperature 30 1440 < th dose independent rect. 9 18
948 485.23 temperature 30 1440 < th dose independent rect. 9 20
949 485.23 temperature 30 1440 < th dose independent rect. 9 22
953 485.25 temperature 30 1440 < th dose independent rect. 9 16
956 485.27 temperature 30 1440 > th dose independent rect. 17 19
966 485.33 temperature 30 1440 < th dose independent rect. 9 10