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Os03g0299200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Alcohol dehydrogenase (Fragment).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.9 (0.0866) R2 : 0.51
β1 : -5.67 (0.643) R2dD : 1.26 R2D : -0.763
β2 : 0.564 (0.117) R2dC : 0.025 R2C : -0.288
β3 : 2.76 (0.4) R2dE : 0.532 R2E : -0.486
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -16.1 (3.25) R2dD*E : 0.554 R2D*E : -1.23
γ1 : -1.58 (0.104) R2dN8 : 0.37 R2N8 : 0.12
σ : 0.862
deviance : 342.86
__
_____
C
peak time of C : 3.64
E
wheather : temperature
threshold : 30.02
memory length : 2684
response mode : > th
dose dependency : dose independent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
335.69 0.861 10.9 -5.68 0.553 2.77 1.53 -16.3 -1.57 3.49 30.06 2684 -- --
359.52 0.883 10.7 -4.41 0.584 1.84 1.78 -- -2.29 3.23 20.3 22076 -- --
342.86 0.862 10.9 -5.67 0.564 2.76 -- -16.1 -1.58 3.64 30.02 2684 -- --
363.23 0.888 10.7 -4.16 0.597 1.68 -- -- -2.28 2.7 20.2 26386 -- --
360.05 0.884 10.8 -5.63 -- 2.82 -- -15.9 -1.55 -- 30.05 2684 -- --
386.69 0.922 10.5 -2.32 0.633 -- 1.52 -- -1.58 2.98 -- -- -- --
394.46 0.93 10.5 -2.35 0.639 -- -- -- -1.59 2.96 -- -- -- --
376.13 0.903 10.6 -2.5 -- 0.986 -- -- -1.84 -- 24.9 1331 -- --
471.8 1.01 10.4 -- 0.652 -1.21 -- -- -1.04 2.02 18.4 47520 -- --
417.91 0.955 10.5 -2.32 -- -- -- -- -1.57 -- -- -- -- --
539.95 1.09 10.5 -- 0.592 -- -- -- -1.33 2.94 -- -- -- --
492.8 1.03 10.4 -- -- -1.31 -- -- -1.01 -- 18.4 47520 -- --
560.16 1.1 10.5 -- -- -- -- -- -1.32 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 324.72 humidity 50 4320 < th dose dependent rect. 16 1
2 327.80 humidity 50 4320 < th dose independent rect. 16 1
3 328.34 temperature 30 4320 > th dose dependent rect. 18 1
18 330.63 temperature 25 1440 < th dose independent rect. 22 1
19 330.74 radiation 20 1440 < th dose dependent rect. 18 11
20 330.88 temperature 25 1440 < th dose independent rect. 21 3
21 331.42 temperature 25 1440 > th dose dependent rect. 20 3
24 331.62 temperature 25 1440 > th dose independent rect. 21 2
27 332.69 radiation 20 1440 < th dose dependent rect. 18 9
37 333.83 humidity 60 4320 > th dose independent rect. 18 11
41 334.05 humidity 60 4320 > th dose independent rect. 18 9
43 334.20 humidity 60 4320 > th dose independent rect. 18 2
45 334.26 humidity 60 4320 > th dose independent rect. 18 7
46 334.28 radiation 10 1440 < th dose dependent rect. 18 2
49 334.42 wind 7 43200 > th dose dependent rect. 5 10
50 334.43 wind 7 43200 > th dose dependent rect. 8 7
51 334.46 radiation 10 1440 < th dose dependent rect. 18 7
56 334.56 humidity 60 4320 > th dose independent rect. 18 13
57 334.58 humidity 60 4320 > th dose independent rect. 18 5
60 334.62 wind 1 43200 < th dose dependent rect. 1 1
61 334.63 humidity 50 4320 > th dose independent rect. 16 1
67 334.80 humidity 50 4320 > th dose independent rect. 16 13
68 334.81 humidity 50 4320 > th dose independent rect. 16 4
72 334.89 humidity 60 4320 < th dose independent rect. 18 1
73 334.92 humidity 50 4320 > th dose independent rect. 16 11
75 334.94 humidity 50 4320 > th dose independent rect. 16 9
93 334.96 humidity 50 4320 > th dose independent rect. 16 7
95 334.97 humidity 60 4320 < th dose dependent rect. 18 1
99 335.03 humidity 50 4320 > th dose independent rect. 16 15
136 335.12 temperature 25 720 > th dose dependent rect. 18 14
168 335.77 wind 9 43200 > th dose independent rect. 18 21
190 336.07 temperature 30 4320 > th dose independent rect. 18 15
194 336.15 wind 9 43200 > th dose independent rect. 8 7
201 336.34 wind 9 43200 < th dose independent rect. 3 12
204 336.36 wind 9 43200 < th dose independent rect. 18 21
205 336.37 wind 9 43200 > th dose independent rect. 20 19
211 336.45 wind 9 43200 < th dose independent rect. 5 10
212 336.45 temperature 15 270 > th dose dependent rect. 1 6
219 336.55 wind 9 43200 > th dose independent rect. 2 13
225 336.59 wind 9 43200 < th dose independent rect. 7 8
228 336.61 wind 9 43200 > th dose independent rect. 24 15
233 336.67 wind 9 43200 > th dose independent rect. 5 10
240 336.73 temperature 25 1440 > th dose dependent sin 11 NA
254 336.81 radiation 1 1440 > th dose dependent rect. 18 1
265 336.82 radiation 30 4320 > th dose independent rect. 16 16
279 336.90 temperature 30 4320 < th dose independent rect. 18 15
283 336.96 wind 9 43200 < th dose independent rect. 20 19
284 336.98 wind 1 720 < th dose dependent rect. 4 1
287 337.00 wind 7 43200 > th dose dependent sin 1 NA
316 337.38 radiation 30 4320 > th dose independent rect. 7 1
332 337.42 temperature 30 1440 > th dose independent sin 7 NA
344 337.53 radiation 10 1440 < th dose dependent rect. 18 5
357 337.75 wind 7 43200 > th dose dependent rect. 18 21
378 337.97 wind 9 43200 > th dose independent sin 0 NA
395 338.12 wind 9 43200 > th dose independent rect. 2 19
397 338.13 wind 9 43200 > th dose independent rect. 4 17
401 338.18 wind 9 43200 > th dose independent rect. 24 21
404 338.19 wind 9 43200 > th dose independent rect. 7 14
407 338.21 wind 9 43200 > th dose independent rect. 11 23
408 338.21 wind 9 43200 > th dose dependent rect. 13 19
413 338.23 temperature 30 1440 < th dose independent sin 7 NA
442 338.31 wind 3 43200 < th dose dependent rect. 9 1
450 338.36 wind 9 43200 > th dose dependent rect. 11 21
474 338.49 wind 9 43200 < th dose independent sin 0 NA
494 338.57 wind 9 43200 < th dose independent rect. 3 18
512 338.65 wind 9 43200 > th dose independent rect. 13 23
516 338.67 wind 9 43200 > th dose independent rect. 13 20
520 338.69 temperature 30 1440 > th dose independent rect. 18 21
529 338.71 wind 3 43200 > th dose dependent rect. 9 6
535 338.75 temperature 30 4320 > th dose independent rect. 18 1
556 338.78 temperature 25 4320 > th dose dependent rect. 8 1
581 338.88 wind 9 43200 > th dose independent rect. 8 22
659 339.05 wind 9 43200 > th dose independent no NA NA
685 339.10 temperature 25 4320 > th dose dependent rect. 6 3
690 339.11 temperature 30 1440 < th dose independent rect. 15 21
706 339.14 wind 9 43200 < th dose independent rect. 13 23
712 339.15 wind 9 43200 < th dose independent rect. 13 21
716 339.16 temperature 30 4320 < th dose independent rect. 18 11
722 339.18 temperature 30 4320 < th dose independent rect. 18 2
728 339.19 wind 3 43200 < th dose dependent rect. 8 3
752 339.22 wind 9 43200 < th dose independent rect. 11 23
771 339.31 temperature 30 4320 < th dose independent rect. 18 9
803 339.39 temperature 30 1440 > th dose independent rect. 15 21
840 339.47 humidity 80 43200 < th dose dependent rect. 22 1
866 339.49 temperature 30 1440 > th dose independent rect. 8 7
901 339.55 temperature 20 270 > th dose independent rect. 1 6
944 339.66 temperature 30 1440 > th dose independent rect. 13 23
984 339.74 wind 7 43200 > th dose dependent rect. 11 23