Os03g0297700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Ubiquitin ligase SINAT5 (EC 6.3.2.-) (Seven in absentia homolog 5).
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Os03g0297700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Ubiquitin ligase SINAT5 (EC 6.3.2.-) (Seven in absentia homolog 5).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 67.67 | 0.387 | 10.7 | 1.51 | 0.928 | -0.72 | 0.74 | 1.3 | 0.441 | 23.8 | 23.84 | 1385 | -- | -- |
| 68.58 | 0.386 | 10.7 | 1.15 | 0.922 | -0.594 | 0.815 | -- | 0.375 | 23.8 | 22.94 | 1360 | -- | -- |
| 70.01 | 0.39 | 10.7 | 1.5 | 0.926 | -0.718 | -- | 1.4 | 0.445 | 23.9 | 23.78 | 1379 | -- | -- |
| 71.16 | 0.393 | 10.7 | 1.1 | 0.92 | -0.591 | -- | -- | 0.355 | 23.9 | 22.82 | 1378 | -- | -- |
| 102.84 | 0.475 | 10.7 | 1.34 | -- | -1.15 | -- | 1.64 | 0.456 | -- | 23.01 | 1563 | -- | -- |
| 82.01 | 0.425 | 10.8 | 0.927 | 0.873 | -- | 0.732 | -- | 0.233 | 23.6 | -- | -- | -- | -- |
| 84.31 | 0.43 | 10.8 | 0.897 | 0.87 | -- | -- | -- | 0.229 | 23.7 | -- | -- | -- | -- |
| 102.24 | 0.473 | 10.7 | 1.13 | -- | -1.1 | -- | -- | 0.412 | -- | 21.5 | 1596 | -- | -- |
| 99.81 | 0.465 | 10.8 | -- | 0.922 | -0.351 | -- | -- | 0.0412 | 0.0204 | 30.71 | 1257 | -- | -- |
| 131.88 | 0.537 | 10.8 | 0.922 | -- | -- | -- | -- | 0.24 | -- | -- | -- | -- | -- |
| 105.5 | 0.48 | 10.8 | -- | 0.88 | -- | -- | -- | 0.129 | 23.8 | -- | -- | -- | -- |
| 134.64 | 0.542 | 10.8 | -- | -- | -0.88 | -- | -- | 0.256 | -- | 21.5 | 1596 | -- | -- |
| 154.29 | 0.58 | 10.8 | -- | -- | -- | -- | -- | 0.137 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 63.15 | temperature | 15 | 10 | > th | dose dependent | rect. | 5 | 15 |
| 5 | 65.14 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 1 |
| 9 | 65.47 | temperature | 20 | 270 | > th | dose dependent | rect. | 2 | 6 |
| 20 | 65.83 | temperature | 20 | 270 | > th | dose dependent | rect. | 3 | 4 |
| 22 | 65.88 | temperature | 10 | 720 | > th | dose dependent | rect. | 20 | 13 |
| 24 | 65.91 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 11 |
| 28 | 65.99 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 19 |
| 39 | 66.21 | temperature | 20 | 270 | > th | dose independent | rect. | 3 | 15 |
| 72 | 66.53 | temperature | 30 | 720 | < th | dose dependent | rect. | 24 | 5 |
| 87 | 66.61 | temperature | 25 | 1440 | > th | dose dependent | rect. | 12 | 19 |
| 119 | 66.79 | temperature | 20 | 720 | > th | dose dependent | rect. | 21 | 11 |
| 120 | 66.79 | temperature | 20 | 720 | > th | dose dependent | rect. | 20 | 13 |
| 125 | 66.82 | temperature | 20 | 10 | > th | dose independent | rect. | 5 | 15 |
| 165 | 67.00 | temperature | 30 | 720 | < th | dose dependent | sin | 9 | NA |
| 177 | 67.06 | temperature | 25 | 1440 | > th | dose dependent | sin | 17 | NA |
| 189 | 67.11 | humidity | 70 | 720 | > th | dose independent | rect. | 18 | 1 |
| 196 | 67.14 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 21 |
| 205 | 67.19 | temperature | 10 | 1440 | > th | dose dependent | rect. | 13 | 1 |
| 214 | 67.22 | temperature | 10 | 1440 | > th | dose dependent | rect. | 15 | 1 |
| 228 | 67.27 | temperature | 20 | 10 | > th | dose dependent | rect. | 5 | 4 |
| 258 | 67.34 | temperature | 30 | 720 | < th | dose dependent | rect. | 18 | 17 |
| 320 | 67.54 | humidity | 60 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 356 | 67.64 | temperature | 20 | 720 | > th | dose dependent | sin | 8 | NA |
| 403 | 67.75 | temperature | 20 | 10 | > th | dose dependent | rect. | 12 | 23 |
| 430 | 67.83 | temperature | 10 | 720 | > th | dose dependent | sin | 7 | NA |
| 449 | 67.86 | temperature | 25 | 1440 | > th | dose dependent | rect. | 23 | 20 |
| 452 | 67.87 | temperature | 25 | 1440 | > th | dose dependent | rect. | 5 | 14 |
| 453 | 67.87 | temperature | 25 | 1440 | > th | dose dependent | rect. | 1 | 18 |
| 566 | 68.02 | humidity | 70 | 720 | > th | dose independent | rect. | 17 | 11 |
| 574 | 68.02 | temperature | 25 | 1440 | > th | dose dependent | rect. | 5 | 21 |
| 592 | 68.04 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 854 | 68.49 | temperature | 25 | 1440 | > th | dose independent | rect. | 11 | 13 |
| 884 | 68.55 | temperature | 25 | 1440 | < th | dose independent | rect. | 11 | 13 |
| 954 | 68.64 | humidity | 50 | 720 | > th | dose dependent | rect. | 17 | 4 |
| 989 | 68.70 | temperature | 10 | 720 | > th | dose dependent | sin | 9 | NA |