Os03g0296800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Mitochondrial substrate carrier family protein.
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Os03g0296800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Mitochondrial substrate carrier family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 62.6 | 0.372 | 13 | 1.36 | 1.07 | -0.84 | -0.189 | 1.4 | 0.379 | 9.85 | 25.7 | 2671 | -- | -- |
| 60.03 | 0.361 | 13 | 1.08 | 1.09 | -0.784 | -0.234 | -- | 0.557 | 10 | 26.03 | 9183 | -- | -- |
| 62.72 | 0.369 | 13 | 1.36 | 1.07 | -0.838 | -- | 1.42 | 0.378 | 9.83 | 25.69 | 2696 | -- | -- |
| 59.77 | 0.36 | 13 | 1.11 | 1.12 | -0.785 | -- | -- | 0.537 | 9.9 | 25.5 | 11155 | -- | -- |
| 121.46 | 0.513 | 13 | 1.76 | -- | -1.36 | -- | 2.82 | 0.537 | -- | 24.92 | 2260 | -- | -- |
| 82.15 | 0.425 | 13.1 | 0.754 | 1.15 | -- | -0.185 | -- | 0.254 | 10.1 | -- | -- | -- | -- |
| 82.28 | 0.425 | 13.1 | 0.747 | 1.15 | -- | -- | -- | 0.254 | 10.1 | -- | -- | -- | -- |
| 126.78 | 0.524 | 13.1 | 1.14 | -- | -1.03 | -- | -- | 0.412 | -- | 22.75 | 2219 | -- | -- |
| 85.08 | 0.43 | 13.1 | -- | 1.14 | -0.541 | -- | -- | 0.332 | 9.8 | 27.72 | 8430 | -- | -- |
| 162.47 | 0.596 | 13.1 | 0.732 | -- | -- | -- | -- | 0.252 | -- | -- | -- | -- | -- |
| 96.98 | 0.461 | 13.1 | -- | 1.15 | -- | -- | -- | 0.171 | 10 | -- | -- | -- | -- |
| 152.23 | 0.575 | 13.1 | -- | -- | -0.842 | -- | -- | 0.223 | -- | 25.2 | 2240 | -- | -- |
| 176.59 | 0.62 | 13.1 | -- | -- | -- | -- | -- | 0.171 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 57.10 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 2 | 57.12 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 18 | 2 |
| 3 | 57.16 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 20 | 4 |
| 4 | 57.34 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 18 | 9 |
| 6 | 57.37 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 18 | 2 |
| 10 | 57.43 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 18 | 7 |
| 13 | 57.45 | wind | 3.0 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 14 | 57.49 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 18 | 2 |
| 18 | 57.56 | wind | 3.0 | 43200 | < th | dose independent | rect. | 3 | 1 |
| 22 | 57.59 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 20 | 1 |
| 24 | 57.62 | wind | 3.0 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 28 | 57.66 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 45 | 57.80 | wind | 3.0 | 43200 | > th | dose independent | rect. | 3 | 1 |
| 49 | 57.87 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 8 | 1 |
| 51 | 57.89 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 62 | 57.91 | wind | 3.0 | 43200 | > th | dose independent | rect. | 3 | 6 |
| 63 | 57.92 | wind | 3.0 | 43200 | < th | dose independent | rect. | 3 | 6 |
| 71 | 58.01 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 6 | 3 |
| 78 | 58.13 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 3 | 7 |
| 80 | 58.14 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 18 | 9 |
| 85 | 58.17 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 18 | 7 |
| 88 | 58.19 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 18 | 2 |
| 89 | 58.19 | humidity | 80.0 | 14400 | > th | dose dependent | sin | 14 | NA |
| 109 | 58.31 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 3 | 7 |
| 116 | 58.34 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 3 | 7 |
| 125 | 58.39 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 17 | 16 |
| 131 | 58.42 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 4 | 2 |
| 161 | 58.46 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 3 | 9 |
| 180 | 58.52 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 20 | 5 |
| 192 | 58.55 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 6 | 3 |
| 203 | 58.59 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 207 | 58.60 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 21 | 9 |
| 208 | 58.60 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 3 | 9 |
| 211 | 58.60 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 5 | 22 |
| 214 | 58.61 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 24 | 6 |
| 219 | 58.61 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 12 | 15 |
| 220 | 58.61 | radiation | 40.0 | 14400 | < th | dose dependent | rect. | 18 | 9 |
| 229 | 58.64 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 4 | 2 |
| 261 | 58.70 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 276 | 58.73 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 21 | 5 |
| 294 | 58.77 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 3 | 18 |
| 297 | 58.78 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 20 | 7 |
| 313 | 58.81 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 12 | 19 |
| 331 | 58.84 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 340 | 58.86 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 345 | 58.87 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 18 | 9 |
| 386 | 58.94 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 16 | 4 |
| 395 | 58.96 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 3 | 15 |
| 405 | 58.98 | humidity | 90.0 | 14400 | < th | dose independent | sin | 14 | NA |
| 489 | 59.09 | humidity | 60.0 | 14400 | > th | dose dependent | rect. | 12 | 19 |
| 518 | 59.13 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 20 | 21 |
| 521 | 59.14 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 18 | 14 |
| 524 | 59.14 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 9 | 22 |
| 526 | 59.15 | radiation | 1.0 | 4320 | > th | dose dependent | rect. | 17 | 1 |
| 579 | 59.20 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 609 | 59.23 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 643 | 59.26 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 5 | 11 |
| 691 | 59.30 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 12 | 15 |
| 705 | 59.31 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 21 | 2 |
| 726 | 59.33 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 16 | 2 |
| 730 | 59.33 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 16 | 2 |
| 765 | 59.36 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 12 | 19 |
| 780 | 59.37 | humidity | 90.0 | 14400 | > th | dose dependent | no | NA | NA |
| 782 | 59.37 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 5 | 6 |
| 793 | 59.38 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 16 | 2 |
| 804 | 59.38 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 15 |
| 831 | 59.40 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 18 | 3 |
| 848 | 59.41 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 10 | 21 |
| 914 | 59.45 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 943 | 59.47 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 967 | 59.49 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 20 | 23 |